Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 4.2e-147 524.6 258 100.0
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 1.4e-145 519.6 258 98.8
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 2.6e-144 515.4 258 97.7
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 3.5e-141 505.0 258 96.1
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 2.5e-123 445.7 256 86.7
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 3.6e-122 441.8 258 83.7
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 1.2e-120 436.8 257 82.9
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 1.5e-120 436.4 256 84.4
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 1.3e-119 433.3 259 82.2
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 1.7e-119 433.0 258 82.2
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 6.3e-119 431.0 256 83.6
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 3.1e-118 428.7 256 82.4
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 9.1e-118 427.2 257 83.3
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 7.7e-117 424.1 259 80.7
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 2.8e-114 415.6 259 80.7
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 8.6e-108 394.0 247 77.3
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 1.5e-107 393.3 248 77.0
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 8.0e-106 387.5 255 75.3
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 2.6e-104 382.5 252 74.2
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 5.8e-104 381.3 253 75.5
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 7.5e-104 380.9 252 73.0
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 9.8e-104 380.6 249 74.7
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 9.8e-104 380.6 252 74.6
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 1.3e-103 380.2 250 74.4
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 2.9e-103 379.0 252 72.2
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 6.4e-103 377.9 261 70.9
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 8.3e-103 377.5 252 72.6
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.4e-102 376.7 253 72.3
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 1.9e-102 376.3 252 73.0
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 5.4e-102 374.8 250 72.8
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 5.4e-102 374.8 252 73.0
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 2.7e-101 372.5 252 73.0
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 3.5e-101 372.1 253 73.1
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 1.7e-100 369.8 252 74.6
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 1.7e-100 369.8 255 71.8
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 3.9e-100 368.6 250 74.0
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 6.6e-100 367.9 254 69.3
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 6.6e-100 367.9 218 80.7
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.1e-99 367.1 253 72.7
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 1.5e-99 366.7 218 81.2
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 1.9e-99 366.3 248 72.2
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 2.5e-99 365.9 251 72.1
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.3e-99 365.5 214 80.4
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 1.6e-98 363.2 251 72.1
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 2.8e-98 362.5 256 71.1
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 8.1e-98 360.9 218 79.4
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 1.8e-97 359.8 252 71.0
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 4.0e-97 358.6 218 79.8
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 6.8e-97 357.8 252 68.7
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 6.8e-97 357.8 253 71.1
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.2e-96 357.1 252 70.2
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 1.2e-96 357.1 252 69.8
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 1.5e-96 356.7 218 79.4
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 1.5e-96 356.7 253 70.8
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 2.0e-96 356.3 250 70.0
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 2.6e-96 355.9 245 69.8
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 5.8e-96 354.8 253 70.8
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 9.8e-96 354.0 251 69.3
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 9.8e-96 354.0 253 70.4
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 9.8e-96 354.0 218 77.1
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 2.2e-95 352.8 256 69.1
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 3.7e-95 352.1 242 69.4
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 8.3e-95 350.9 253 70.8
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 1.1e-94 350.5 221 75.6
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.9e-94 349.7 252 67.9
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 3.2e-94 349.0 251 67.3
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 5.4e-94 348.2 217 76.5
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 9.2e-94 347.4 218 77.5
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 1.2e-93 347.1 214 79.0
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 1.2e-93 347.1 259 68.0
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 6.0e-93 344.7 255 67.5
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.7e-92 343.2 239 70.7
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 2.3e-92 342.8 259 67.2
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 1.1e-91 340.5 217 74.2
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 1.9e-91 339.7 242 69.4
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.9e-91 339.7 214 76.2
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 4.3e-91 338.6 217 74.7
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 7.3e-91 337.8 212 74.5
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 2.1e-90 336.3 217 72.8
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 4.7e-90 335.1 218 74.8
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 6.2e-90 334.7 214 75.2
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 1.4e-89 333.6 214 75.7
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 1.8e-89 333.2 213 75.1
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 1.8e-89 333.2 227 73.6
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 3.1e-89 332.4 248 68.1
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 4.0e-89 332.0 250 64.8
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 5.2e-89 331.6 214 74.8
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 5.2e-89 331.6 214 74.8
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 5.2e-89 331.6 214 74.8
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 3.4e-88 328.9 222 73.0
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 7.6e-88 327.8 214 73.4
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 9.9e-88 327.4 251 64.1
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 9.9e-88 327.4 222 72.5
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 1.3e-87 327.0 217 71.4
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 4.9e-87 325.1 218 72.5
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 4.9e-87 325.1 213 75.6
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 6.4e-87 324.7 218 73.9
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 8.4e-87 324.3 213 73.2
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 1.4e-86 323.6 222 71.6
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 4.1e-86 322.0 211 71.6
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 4.1e-86 322.0 211 71.6
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 1.2e-85 320.5 218 71.6
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 1.2e-85 320.5 218 71.6
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 1.2e-85 320.5 218 71.6
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 2.1e-85 319.7 218 71.1
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 3.3e-83 312.4 247 61.9
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 4.7e-82 308.5 209 71.3
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 5.2e-81 305.1 242 61.2
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 8.9e-81 304.3 240 61.2
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 7.6e-80 301.2 245 60.4
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 4.6e-77 292.0 210 64.8
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 4.6e-77 292.0 240 60.4
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 1.7e-76 290.0 183 76.5
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 5.1e-76 288.5 215 65.6
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 8.7e-76 287.7 210 65.2
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 2.1e-74 283.1 243 56.8
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.1e-74 283.1 214 66.4
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 4.4e-72 275.4 249 59.8
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 9.3e-62 241.1 186 62.9
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 4.3e-59 232.3 163 68.7
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 2.4e-49 199.9 140 68.6
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 7.9e-45 184.9 216 44.9
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 2.3e-44 183.3 176 56.2
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 8.7e-44 181.4 144 61.1
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.2e-39 166.8 114 71.1
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 3.4e-32 142.9 171 45.0
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 2.9e-31 139.8 193 44.0
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 2.8e-26 123.2 100 60.0
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 5.2e-12 75.9 46 69.6
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 6.8e-12 75.5 53 67.9
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 5.0e-07 59.3 40 60.0


User provided reference genes

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