Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 3.1e-156 555.1 279 100.0
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.0e-69 267.7 185 76.8
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 1.3e-69 267.3 201 71.6
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 8.5e-61 238.0 185 70.3
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 1.2e-49 201.1 194 55.7
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 7.5e-49 198.4 209 55.5
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 7.5e-49 198.4 188 59.0
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 3.7e-48 196.1 144 66.7
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 4.8e-48 195.7 188 54.8
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 4.8e-48 195.7 198 56.1
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 6.3e-48 195.3 189 56.6
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 8.3e-48 194.9 188 55.3
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 4.1e-47 192.6 198 54.5
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 1.6e-46 190.7 188 54.3
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 3.5e-46 189.5 189 55.0
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 7.7e-46 188.3 222 47.3
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 2.3e-45 186.8 175 55.4
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 2.3e-45 186.8 198 51.5
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 2.9e-45 186.4 178 55.6
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.9e-45 186.4 222 46.8
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.9e-45 186.4 222 46.8
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 5.0e-45 185.7 188 56.4
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 8.6e-45 184.9 141 61.7
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 8.6e-45 184.9 198 52.0
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.5e-44 184.1 198 51.5
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 1.5e-44 184.1 205 51.2
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 2.5e-44 183.3 199 51.3
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 2.5e-44 183.3 199 51.3
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 5.5e-44 182.2 173 54.3
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 5.5e-44 182.2 198 50.5
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 7.2e-44 181.8 178 53.4
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 9.5e-44 181.4 206 50.0
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 1.6e-43 180.6 198 50.5
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 1.6e-43 180.6 178 53.9
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 1.6e-43 180.6 178 53.9
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 2.1e-43 180.3 121 69.4
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 2.8e-43 179.9 184 53.8
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 2.8e-43 179.9 121 69.4
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 8.0e-43 178.3 198 51.0
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 1.0e-42 177.9 178 52.2
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 1.4e-42 177.6 177 54.8
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 1.4e-42 177.6 174 54.0
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 1.4e-42 177.6 124 67.7
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 2.3e-42 176.8 220 49.5
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 3.0e-42 176.4 207 48.3
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 5.2e-42 175.6 181 50.3
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 5.2e-42 175.6 141 63.1
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 5.2e-42 175.6 203 47.8
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 6.8e-42 175.3 174 54.0
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 6.8e-42 175.3 203 47.8
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 2.0e-41 173.7 141 61.7
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 2.0e-41 173.7 123 65.0
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 2.0e-41 173.7 202 50.0
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 2.6e-41 173.3 199 48.7
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 3.4e-41 172.9 141 61.7
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 5.7e-41 172.2 198 50.0
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 9.8e-41 171.4 141 61.0
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 9.8e-41 171.4 141 61.0
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 9.8e-41 171.4 141 61.0
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 9.8e-41 171.4 141 61.0
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 9.8e-41 171.4 176 52.3
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 1.3e-40 171.0 174 53.4
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 1.3e-40 171.0 198 50.5
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 1.3e-40 171.0 188 52.7
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 1.7e-40 170.6 178 54.5
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 2.2e-40 170.2 185 51.9
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 2.8e-40 169.9 169 53.8
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 3.7e-40 169.5 182 50.5
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 3.7e-40 169.5 179 50.8
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 3.7e-40 169.5 218 46.8
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 3.7e-40 169.5 182 51.1
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 3.7e-40 169.5 182 51.1
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 4.9e-40 169.1 130 63.8
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 8.3e-40 168.3 177 52.0
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 8.3e-40 168.3 157 51.6
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 1.1e-39 167.9 131 63.4
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 1.1e-39 167.9 123 65.9
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 1.1e-39 167.9 118 66.9
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 2.4e-39 166.8 122 64.8
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 2.4e-39 166.8 115 71.3
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 7.0e-39 165.2 204 47.1
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 7.0e-39 165.2 198 48.0
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 9.2e-39 164.9 199 48.2
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 1.2e-38 164.5 115 67.0
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 1.2e-38 164.5 119 65.5
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 2.0e-38 163.7 141 58.9
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 3.5e-38 162.9 169 52.7
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 5.9e-38 162.2 224 45.1
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 1.7e-37 160.6 118 65.3
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 8.6e-37 158.3 116 62.9
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 8.6e-37 158.3 118 63.6
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 3.3e-36 156.4 199 46.7
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 1.6e-35 154.1 126 56.3
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 2.1e-35 153.7 116 62.9
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 2.8e-35 153.3 117 60.7
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 2.6e-33 146.7 149 52.3
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 2.6e-33 146.7 115 60.0
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 2.2e-32 143.7 198 44.4
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 2.4e-31 140.2 141 53.2
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 4.6e-30 136.0 123 57.7
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 3.9e-29 132.9 145 49.7
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 5.6e-28 129.0 140 45.0
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 5.6e-28 129.0 115 53.9
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 9.5e-28 128.3 134 44.0
HanXRQChr05g0162621 Helianthus annuus HOM05D005721 ORTHO05D006758 6.8e-26 122.1 83 72.3
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 1.2e-25 121.3 112 47.3
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 2.9e-24 116.7 126 40.5
QL05p015216 Quercus lobata HOM05D005721 ORTHO05D006758 1.1e-23 114.8 120 50.0
HanXRQChr04g0123091 Helianthus annuus HOM05D005721 ORTHO05D006758 1.9e-23 114.0 79 69.6
Gohir.A06G146950 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.6e-17 93.6 83 54.2
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 7.8e-14 82.0 130 31.5
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 3.9e-13 79.7 91 46.2
Oeu023783.1 Olea europaea HOM05D005721 ORTHO05D006758 9.5e-12 75.1 49 71.4
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.1e-11 73.9 62 54.8
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 2.7e-06 57.0 84 39.3


User provided reference genes

Program Settings