Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 2.1e-71 272.3 143 100.0
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 2.1e-71 272.3 143 100.0
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 1.6e-39 166.4 128 71.9
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 1.4e-38 163.3 134 70.1
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 2.6e-37 159.1 113 71.7
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 2.6e-37 159.1 139 67.6
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 5.7e-37 157.9 112 76.8
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 5.4e-35 151.4 140 62.1
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 2.7e-34 149.1 118 69.5
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.7e-34 149.1 134 63.4
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 3.5e-34 148.7 135 62.2
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 2.3e-33 146.0 110 62.7
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 2.9e-33 145.6 113 66.4
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 3.8e-33 145.2 145 56.6
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.8e-33 145.2 138 57.2
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 8.6e-33 144.1 93 76.3
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.1e-32 143.7 130 60.8
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.1e-32 143.7 92 75.0
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 1.1e-32 143.7 125 61.6
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 1.5e-32 143.3 90 76.7
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.9e-32 142.9 99 70.7
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 2.5e-32 142.5 111 65.8
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 2.5e-32 142.5 136 58.8
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 3.3e-32 142.1 93 73.1
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 3.3e-32 142.1 138 58.0
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.3e-32 142.1 128 58.6
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 3.3e-32 142.1 128 63.3
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 4.3e-32 141.7 119 61.3
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 5.6e-32 141.4 119 61.3
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 7.3e-32 141.0 128 60.9
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 7.3e-32 141.0 86 81.4
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 7.3e-32 141.0 94 71.3
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 9.5e-32 140.6 100 72.0
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 9.5e-32 140.6 90 75.6
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 9.5e-32 140.6 130 57.7
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.2e-31 140.2 90 76.7
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 1.6e-31 139.8 121 62.0
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 1.6e-31 139.8 112 60.7
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 2.1e-31 139.4 113 64.6
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 2.1e-31 139.4 113 64.6
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 2.1e-31 139.4 124 60.5
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 2.8e-31 139.0 90 75.6
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 2.8e-31 139.0 118 61.9
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 2.8e-31 139.0 90 74.4
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 3.6e-31 138.7 140 57.9
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 3.6e-31 138.7 90 75.6
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 4.7e-31 138.3 111 67.6
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 4.7e-31 138.3 134 57.5
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 6.1e-31 137.9 137 56.2
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 6.1e-31 137.9 130 54.6
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 8.0e-31 137.5 140 56.4
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 1.0e-30 137.1 93 74.2
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 1.0e-30 137.1 93 74.2
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 2.3e-30 136.0 121 61.2
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 3.0e-30 135.6 111 63.1
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 4.0e-30 135.2 93 72.0
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 4.0e-30 135.2 133 57.9
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 5.2e-30 134.8 90 71.1
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 5.2e-30 134.8 103 68.0
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 5.2e-30 134.8 129 56.6
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 5.2e-30 134.8 143 53.1
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 6.8e-30 134.4 133 57.9
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 6.8e-30 134.4 133 58.6
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 1.2e-29 133.7 109 66.1
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 1.2e-29 133.7 127 60.6
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 3.4e-29 132.1 128 58.6
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 3.4e-29 132.1 90 70.0
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 3.4e-29 132.1 118 59.3
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 3.4e-29 132.1 139 54.7
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 4.4e-29 131.7 86 74.4
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 7.5e-29 131.0 132 54.5
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 2.2e-28 129.4 92 65.2
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 2.2e-28 129.4 137 54.0
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 2.2e-28 129.4 89 70.8
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 2.9e-28 129.0 142 52.1
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 8.3e-28 127.5 108 61.1
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 1.8e-27 126.3 93 64.5
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 1.8e-27 126.3 126 56.3
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 3.2e-27 125.6 93 64.5
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 5.4e-27 124.8 113 55.8
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 7.0e-27 124.4 91 65.9
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 7.0e-27 124.4 116 58.6
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 9.2e-27 124.0 93 64.5
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 1.2e-26 123.6 93 62.4
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 1.2e-26 123.6 106 59.4
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 1.2e-26 123.6 111 56.8
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 1.2e-26 123.6 106 59.4
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 2.7e-26 122.5 109 56.9
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 2.7e-26 122.5 93 63.4
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 2.7e-26 122.5 109 56.9
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 2.7e-26 122.5 109 56.9
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 3.5e-26 122.1 93 61.3
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 4.6e-26 121.7 93 63.4
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 4.6e-26 121.7 122 54.9
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 4.6e-26 121.7 93 63.4
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 4.6e-26 121.7 122 54.9
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 1.1e-24 117.1 132 48.5
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 4.3e-24 115.2 79 67.1
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 4.3e-24 115.2 81 69.1
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 5.6e-24 114.8 98 62.2
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 1.6e-23 113.2 169 42.0
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 2.8e-23 112.5 87 59.8
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 8.9e-22 107.5 87 57.5
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 2.0e-21 106.3 91 54.9
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 2.6e-21 105.9 119 47.9
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 4.4e-21 105.1 91 60.4
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 1.4e-19 100.1 75 62.7
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 4.1e-19 98.6 111 44.1
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 4.6e-18 95.1 88 51.1
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 1.7e-17 93.2 113 49.6
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 2.3e-17 92.8 73 60.3
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 1.1e-16 90.5 108 48.1
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 7.3e-16 87.8 69 62.3
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 7.3e-16 87.8 85 45.9
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 1.2e-15 87.0 75 64.0
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 1.6e-15 86.7 118 44.9
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 2.1e-15 86.3 90 50.0
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 3.6e-15 85.5 66 65.2
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 3.4e-13 79.0 57 63.2
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 3.4e-13 79.0 104 48.1
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 9.9e-13 77.4 48 72.9
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 6.4e-12 74.7 62 54.8
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 8.3e-12 74.3 89 44.9
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 8.3e-12 74.3 89 44.9
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 1.1e-11 73.9 46 67.4
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 3.3e-08 62.4 50 60.0
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 4.3e-08 62.0 49 61.2
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 4.3e-08 62.0 49 61.2
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 1.6e-07 60.1 49 59.2
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 3.6e-07 58.9 68 50.0
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 1.1e-06 57.4 44 63.6
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 1.8e-06 56.6 31 77.4
Eucgr.H02258 Eucalyptus grandis HOM05D005411 ORTHO05D006463 8.9e-06 54.3 35 80.0


User provided reference genes

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