Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 1.8e-137 492.7 266 100.0
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 2.1e-133 479.2 267 97.8
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 7.3e-86 321.2 317 59.9
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 3.6e-85 318.9 315 59.4
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 9.9e-83 310.8 310 57.1
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 1.9e-81 306.6 316 57.0
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 9.5e-78 294.3 295 61.0
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 6.8e-76 288.1 294 57.5
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 2.0e-67 260.0 286 53.8
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 8.4e-66 254.6 258 57.8
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 1.7e-63 246.9 272 52.6
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 4.3e-62 242.3 313 50.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.3e-61 240.7 302 51.0
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 1.6e-61 240.4 293 50.9
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 1.4e-60 237.3 303 47.9
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 1.5e-59 233.8 296 50.0
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 9.9e-59 231.1 312 45.8
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 2.2e-58 229.9 296 48.3
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 2.2e-58 229.9 297 46.5
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 6.4e-58 228.4 284 47.9
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.4e-57 227.3 326 43.9
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 4.2e-57 225.7 303 50.2
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 9.3e-57 224.6 318 42.8
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 1.6e-56 223.8 309 46.0
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 1.0e-55 221.1 323 45.8
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.3e-55 220.7 313 47.3
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.8e-55 220.3 307 47.2
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.8e-55 220.3 326 44.8
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 1.1e-54 217.6 313 45.0
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.3e-54 216.1 308 46.4
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 9.6e-54 214.5 332 45.2
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 2.1e-53 213.4 276 46.4
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 2.1e-53 213.4 285 44.9
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 4.8e-53 212.2 299 47.5
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 6.2e-53 211.8 327 41.3
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 2.4e-52 209.9 325 44.3
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 3.1e-52 209.5 335 42.4
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 6.9e-52 208.4 301 45.8
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 6.9e-52 208.4 325 42.8
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 6.9e-52 208.4 284 44.4
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 1.5e-51 207.2 289 42.6
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 2.6e-51 206.5 316 43.0
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 3.4e-51 206.1 317 40.7
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 4.5e-51 205.7 330 41.2
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 9.9e-51 204.5 313 41.2
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 2.9e-50 203.0 370 37.6
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 8.4e-50 201.4 298 45.3
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 1.4e-49 200.7 311 40.8
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 1.9e-49 200.3 266 46.6
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 1.2e-48 197.6 286 44.4
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.6e-48 197.2 305 40.0
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 3.5e-48 196.1 305 39.7
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 4.6e-48 195.7 294 42.5
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 6.0e-48 195.3 307 40.1
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 1.3e-47 194.1 324 40.7
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 1.8e-47 193.7 306 39.2
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 3.0e-47 193.0 305 42.6
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 3.0e-47 193.0 373 37.8
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 5.1e-47 192.2 314 41.1
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 5.1e-47 192.2 385 38.4
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 6.7e-47 191.8 309 39.8
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.5e-46 190.7 330 39.1
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 1.9e-46 190.3 309 38.5
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.5e-46 189.9 294 41.5
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 5.6e-46 188.7 245 46.1
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 7.4e-46 188.3 271 45.4
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.8e-44 183.7 285 42.5
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.8e-44 183.7 285 42.5
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 4.9e-42 175.6 265 44.2
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 2.5e-41 173.3 304 39.1
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 1.2e-40 171.0 289 39.4
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 5.1e-39 165.6 271 39.1
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 5.1e-39 165.6 233 45.5
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 8.7e-39 164.9 247 42.1
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 9.7e-38 161.4 274 40.1
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 4.1e-36 156.0 249 42.6
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 1.3e-34 151.0 262 39.7
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 3.8e-34 149.4 244 41.4
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 5.0e-34 149.1 356 33.1
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 6.5e-34 148.7 236 40.7
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 6.1e-32 142.1 237 40.1
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 1.5e-30 137.5 112 66.1
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 2.5e-30 136.7 112 60.7
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.3e-29 134.4 131 56.5
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 6.3e-29 132.1 241 39.8
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 9.1e-28 128.3 288 36.8
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 2.6e-27 126.7 290 37.2
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.7e-26 124.0 86 72.1
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.4e-25 120.9 365 28.8
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 1.4e-23 114.4 110 62.7
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 2.3e-23 113.6 104 64.4
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 3.0e-23 113.2 65 84.6
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 1.5e-22 110.9 136 47.8
arahy.Tifrunner.gnm1.ann1.88RVSM Arachis hypogaea HOM05D034159 ORTHO05D008677 2.0e-22 110.5 72 76.4
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.0e-22 110.5 85 68.2
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 4.4e-22 109.4 91 61.5
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.0e-18 98.2 75 66.7
arahy.Tifrunner.gnm1.ann1.AN6BCG Arachis hypogaea HOM05D034159 ORTHO05D008677 2.2e-18 97.1 126 46.0
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 8.5e-18 95.1 78 61.5
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 3.2e-17 93.2 112 50.9
arahy.Tifrunner.gnm1.ann1.GFC4NY Arachis hypogaea HOM05D001602 ORTHO05D001470 1.5e-14 84.3 66 69.7
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.3e-13 81.3 135 38.5
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 4.1e-12 76.3 248 28.2
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.0e-10 71.6 64 54.7
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 5.0e-10 69.3 324 24.1
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 8.5e-10 68.6 323 24.5
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.5e-09 67.8 62 59.7
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 5.5e-09 65.9 48 68.8
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 7.2e-09 65.5 69 49.3
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 9.4e-09 65.1 41 78.0
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 3.6e-08 63.2 139 33.8
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 3.6e-08 63.2 78 51.3
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 5.2e-07 59.3 190 24.2


User provided reference genes

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