Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 5.6e-159 564.3 300 100.0
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 4.1e-154 548.1 300 96.3
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 8.2e-110 401.0 300 76.0
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.4e-109 399.4 302 75.2
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.5e-108 396.7 300 74.7
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.4e-106 390.2 311 72.3
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 6.7e-104 381.3 307 71.3
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 9.0e-101 370.9 302 70.2
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 2.0e-100 369.8 307 70.0
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.0e-95 353.2 309 65.4
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 6.3e-94 348.2 302 64.6
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 3.1e-93 345.9 308 65.3
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 4.5e-92 342.0 282 67.7
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 8.5e-91 337.8 310 62.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.1e-90 337.4 313 62.9
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.2e-89 334.0 237 78.1
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.7e-89 332.8 308 61.0
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.1e-87 327.4 307 61.9
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 7.4e-87 324.7 216 77.3
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 9.7e-87 324.3 252 68.7
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.7e-86 323.6 301 60.1
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.1e-85 320.9 303 61.1
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.8e-85 320.1 306 60.5
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.4e-85 319.7 267 63.7
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 5.9e-84 315.1 273 63.7
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.0e-83 314.3 291 58.4
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 5.0e-83 312.0 297 59.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 5.0e-83 312.0 225 72.4
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.5e-82 309.7 214 72.9
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 5.5e-82 308.5 214 72.9
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.1e-79 300.8 266 62.4
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 2.6e-79 299.7 212 71.2
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 7.5e-79 298.1 212 69.8
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 9.7e-79 297.7 217 70.5
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 9.7e-79 297.7 207 72.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.7e-78 297.0 313 57.8
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.8e-78 296.2 205 73.2
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.8e-78 295.4 216 72.2
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.4e-77 293.9 211 69.7
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.8e-77 293.5 302 54.3
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.4e-77 293.1 292 61.3
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 4.1e-77 292.4 205 71.2
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 5.3e-77 292.0 300 55.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 9.1e-77 291.2 205 70.7
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.6e-76 290.4 205 71.2
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 1.6e-76 290.4 297 55.9
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.6e-76 290.4 205 71.7
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 7.7e-76 288.1 304 55.3
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 7.7e-76 288.1 296 55.4
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.0e-75 287.7 205 69.8
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.2e-75 286.6 280 54.3
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.2e-75 286.6 260 61.5
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.9e-75 286.2 304 53.9
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 1.1e-74 284.3 289 60.9
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.5e-74 283.1 259 57.5
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 3.2e-74 282.7 289 56.7
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.2e-74 282.7 193 74.1
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 4.2e-74 282.3 213 69.0
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 2.1e-73 280.0 289 55.4
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.4e-72 277.3 264 57.6
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.8e-72 276.9 297 56.2
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 1.8e-72 276.9 297 56.2
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 2.3e-72 276.6 213 68.1
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.8e-72 275.0 347 50.4
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.5e-71 273.9 229 62.4
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.5e-71 273.9 212 67.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.5e-71 273.9 207 65.7
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 2.6e-71 273.1 204 68.6
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 9.8e-71 271.2 268 59.7
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.2e-70 270.0 297 55.9
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 5.4e-69 265.4 285 53.0
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.6e-68 263.8 266 57.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.0e-68 263.5 266 56.8
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.5e-66 256.5 274 51.8
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 9.4e-66 254.6 210 62.9
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 4.7e-65 252.3 175 71.4
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 3.0e-64 249.6 179 70.9
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 1.5e-63 247.3 315 49.2
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.3e-62 244.2 268 54.1
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.3e-62 244.2 232 61.2
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.8e-62 243.0 268 53.7
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.7e-62 242.7 211 56.9
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 4.9e-62 242.3 377 44.8
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.4e-61 240.7 236 53.0
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.4e-61 240.7 189 65.6
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.4e-61 240.0 199 61.8
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 7.0e-61 238.4 324 46.6
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.2e-60 237.7 264 52.3
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.2e-60 237.7 264 52.3
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 2.7e-60 236.5 211 57.3
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.1e-58 231.1 175 69.7
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.5e-58 229.9 207 58.0
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.6e-57 227.3 296 49.0
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 4.7e-57 225.7 280 49.6
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.4e-56 224.2 202 55.0
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.2e-54 216.9 225 56.0
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.4e-53 213.4 235 53.2
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.3e-48 196.8 134 73.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 3.1e-48 196.4 142 70.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.6e-47 193.4 251 48.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.2e-46 190.3 216 52.8
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.9e-45 187.2 193 58.5
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 5.0e-43 179.1 214 45.3
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.5e-42 177.6 238 47.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 5.6e-42 175.6 111 76.6
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 9.5e-42 174.9 230 50.4
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 4.1e-37 159.5 143 54.5
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 7.8e-36 155.2 103 74.8
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.7e-35 154.1 265 42.6
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 2.3e-35 153.7 190 44.2
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 7.3e-34 148.7 121 66.9
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 6.2e-33 145.6 225 42.2
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 6.8e-32 142.1 115 62.6
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 4.7e-25 119.4 139 51.1
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 7.6e-23 112.1 187 37.4
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 7.6e-23 112.1 178 35.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 4.6e-20 102.8 192 35.9
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 5.3e-16 89.4 113 46.0
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.6e-12 77.8 69 62.3
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.1e-12 77.4 91 49.5
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 7.4e-10 68.9 53 64.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 7.6e-07 58.9 105 41.0


User provided reference genes

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