Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.4e-170 602.1 301 100.0
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 3.3e-58 229.6 110 97.3
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 7.3e-58 228.4 110 96.4
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 6.2e-57 225.3 110 96.4
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 4.6e-52 209.1 246 55.3
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 4.6e-52 209.1 246 55.3
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.6e-49 200.7 108 80.6
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 1.8e-48 197.2 108 78.7
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 2.3e-48 196.8 108 77.8
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 1.5e-47 194.1 106 78.3
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 9.9e-47 191.4 109 75.2
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 1.7e-46 190.7 108 76.9
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 2.9e-46 189.9 118 68.6
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 3.7e-46 189.5 109 74.3
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 4.9e-46 189.1 84 100.0
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 8.3e-46 188.3 109 72.5
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 8.3e-46 188.3 109 73.4
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.2e-44 184.5 109 72.5
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 3.5e-44 183.0 117 67.5
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 4.6e-44 182.6 106 75.5
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.3e-43 180.3 108 72.2
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 3.0e-43 179.9 106 71.7
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 3.0e-43 179.9 109 68.8
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 5.1e-43 179.1 108 71.3
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 5.1e-43 179.1 105 73.3
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 8.6e-43 178.3 109 67.9
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 1.1e-42 177.9 109 68.8
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 1.5e-42 177.6 109 69.7
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 2.5e-42 176.8 105 70.5
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 3.3e-42 176.4 109 68.8
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 4.3e-42 176.0 105 73.3
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 4.3e-42 176.0 106 69.8
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 5.6e-42 175.6 124 59.7
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 7.3e-42 175.3 109 68.8
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 7.3e-42 175.3 108 67.6
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 2.1e-41 173.7 106 67.9
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 2.8e-41 173.3 106 68.9
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 3.6e-41 172.9 106 69.8
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 3.6e-41 172.9 108 67.6
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 6.2e-41 172.2 106 68.9
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 6.2e-41 172.2 106 67.0
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 1.4e-40 171.0 109 67.0
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 1.8e-40 170.6 103 68.9
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 1.8e-40 170.6 106 69.8
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 2.4e-40 170.2 103 68.0
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 2.4e-40 170.2 109 67.0
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 6.8e-40 168.7 106 65.1
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 6.8e-40 168.7 106 66.0
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 6.8e-40 168.7 106 68.9
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 1.5e-39 167.5 107 62.6
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 2.0e-39 167.2 107 61.7
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 2.0e-39 167.2 107 66.4
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 2.0e-39 167.2 106 67.0
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 2.0e-39 167.2 106 65.1
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 2.6e-39 166.8 106 65.1
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 2.6e-39 166.8 104 67.3
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 4.4e-39 166.0 106 67.0
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 4.4e-39 166.0 107 61.7
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 5.8e-39 165.6 106 67.9
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 5.8e-39 165.6 106 67.0
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 7.6e-39 165.2 106 66.0
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 7.6e-39 165.2 107 61.7
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 7.6e-39 165.2 104 68.3
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 9.9e-39 164.9 105 66.7
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 9.9e-39 164.9 106 64.2
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 9.9e-39 164.9 106 64.2
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 9.9e-39 164.9 106 64.2
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 1.3e-38 164.5 106 63.2
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 1.7e-38 164.1 107 61.7
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 1.7e-38 164.1 106 64.2
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.7e-38 164.1 105 66.7
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 2.2e-38 163.7 104 65.4
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 2.9e-38 163.3 104 63.5
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 2.9e-38 163.3 104 63.5
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 2.9e-38 163.3 104 63.5
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 2.9e-38 163.3 104 65.4
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 1.9e-37 160.6 109 61.5
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.9e-37 160.6 106 61.3
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 3.2e-37 159.8 107 60.7
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 3.2e-37 159.8 103 63.1
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 4.2e-37 159.5 105 64.8
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 7.1e-37 158.7 107 61.7
arahy.Tifrunner.gnm1.ann1.9CXT3Z Arachis hypogaea HOM05D035740 ORTHO05D082897 6.0e-36 155.6 180 58.3
arahy.Tifrunner.gnm1.ann1.C9SE0R Arachis hypogaea HOM05D035740 ORTHO05D086213 6.0e-36 155.6 180 58.3
arahy.Tifrunner.gnm1.ann1.CEJV2N Arachis hypogaea HOM05D035740 ORTHO05D082514 6.0e-36 155.6 180 58.3
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 5.1e-35 152.5 116 56.9
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 1.2e-33 147.9 98 65.3
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 2.8e-33 146.7 84 73.8
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 6.2e-33 145.6 91 65.9
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 6.2e-33 145.6 109 58.7
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 1.8e-32 144.1 108 60.2
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 2.2e-30 137.1 91 65.9
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 2.8e-25 120.2 53 100.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.8e-25 120.2 53 100.0
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 9.0e-24 115.2 76 63.2
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 1.5e-23 114.4 110 44.5
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 4.5e-23 112.8 83 56.6
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 1.1e-21 108.2 61 70.5
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 3.9e-19 99.8 107 42.1
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 3.3e-18 96.7 114 38.6
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 2.2e-14 84.0 57 63.2
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 1.9e-13 80.9 59 54.2
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 2.7e-12 77.0 36 94.4
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.3e-10 70.1 54 59.3
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.3e-09 68.2 94 35.1
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.3e-09 68.2 94 35.1
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 6.2e-09 65.9 65 41.5
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 6.9e-08 62.4 32 78.1
arahy.Tifrunner.gnm1.ann1.AU8VU7 Arachis hypogaea HOM05D050180 ORTHO05D086459 8.4e-06 55.5 91 46.2
arahy.Tifrunner.gnm1.ann1.HRLV9N Arachis hypogaea HOM05D050180 ORTHO05D082258 8.4e-06 55.5 91 46.2


User provided reference genes

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