Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 1.7e-168 595.9 299 100.0
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 9.8e-148 526.9 267 98.9
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.3e-115 420.2 220 96.8
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 1.4e-114 416.8 220 94.5
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.8e-109 399.8 220 90.9
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 3.1e-109 399.1 220 91.4
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 6.0e-105 384.8 220 90.0
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 2.5e-95 352.8 202 89.1
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 2.4e-85 319.7 201 84.1
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.0e-83 312.0 176 88.6
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 7.4e-79 298.1 221 70.6
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.7e-78 295.8 225 72.0
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 4.5e-76 288.9 221 71.0
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 4.7e-73 278.9 225 68.0
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 5.2e-72 275.4 189 78.8
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 8.2e-70 268.1 220 66.4
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 3.1e-69 266.2 219 66.2
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 7.0e-69 265.0 216 65.7
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 1.5e-66 257.3 221 64.7
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 1.0e-64 251.1 205 62.9
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 4.0e-64 249.2 218 61.9
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 1.0e-59 234.6 219 58.0
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 5.0e-59 232.3 223 55.2
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 6.5e-59 231.9 223 55.6
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 1.5e-58 230.7 215 59.5
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 1.5e-58 230.7 216 56.0
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 3.2e-58 229.6 215 57.2
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 1.6e-57 227.3 230 54.8
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 1.6e-57 227.3 215 54.9
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 2.1e-57 226.9 203 57.1
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 4.7e-57 225.7 215 56.7
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 8.0e-57 224.9 214 57.9
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 1.0e-56 224.6 224 52.7
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 2.3e-56 223.4 203 60.6
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 3.0e-56 223.0 249 50.2
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 3.0e-56 223.0 227 51.5
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 4.0e-56 222.6 224 51.8
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 4.0e-56 222.6 230 53.9
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 4.0e-56 222.6 220 53.2
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 5.2e-56 222.2 217 54.8
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 5.2e-56 222.2 230 53.9
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 4.4e-55 219.2 188 67.6
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 7.5e-55 218.4 230 50.9
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 7.5e-55 218.4 215 54.4
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 7.5e-55 218.4 220 52.7
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 9.8e-55 218.0 203 56.7
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 1.7e-54 217.2 223 53.8
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 2.2e-54 216.9 220 51.8
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 2.2e-54 216.9 241 50.2
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 8.3e-54 214.9 226 52.7
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 4.1e-53 212.6 201 55.7
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea HOM05D004487 ORTHO05D005483 7.0e-53 211.8 135 81.5
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 9.1e-53 211.5 214 52.8
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 1.2e-52 211.1 204 55.4
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 1.2e-52 211.1 201 56.2
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 1.6e-52 210.7 216 53.7
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 2.0e-52 210.3 203 55.2
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 3.5e-52 209.5 229 49.8
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 5.9e-52 208.8 203 54.7
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 1.0e-51 208.0 259 45.6
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 1.0e-51 208.0 206 51.9
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 3.8e-51 206.1 208 53.8
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 3.8e-51 206.1 220 51.8
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 5.0e-51 205.7 225 55.1
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 6.6e-51 205.3 204 54.4
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 8.6e-51 204.9 214 52.8
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 8.6e-51 204.9 209 52.6
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 8.6e-51 204.9 222 50.5
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 2.5e-50 203.4 223 51.6
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 1.2e-49 201.1 203 52.2
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 1.2e-49 201.1 223 50.2
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 1.6e-49 200.7 203 53.2
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 2.8e-49 199.9 197 53.3
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 2.8e-49 199.9 222 50.5
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 4.7e-49 199.1 212 54.7
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 6.1e-49 198.7 184 57.1
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 1.0e-48 198.0 270 43.0
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 1.0e-48 198.0 225 52.0
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 5.2e-48 195.7 215 49.8
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 5.2e-48 195.7 215 49.8
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 5.2e-48 195.7 214 49.5
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 5.2e-48 195.7 214 49.5
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 6.8e-48 195.3 196 53.1
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 1.5e-47 194.1 202 54.0
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.6e-47 193.4 106 92.5
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 2.6e-47 193.4 220 47.3
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.4e-47 193.0 100 93.0
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 3.4e-47 193.0 221 48.9
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 5.7e-47 192.2 224 50.0
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 5.7e-47 192.2 215 48.8
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 9.8e-47 191.4 202 56.4
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.8e-46 189.9 216 49.1
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.7e-46 189.5 106 90.6
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 1.4e-45 187.6 96 94.8
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 2.4e-45 186.8 221 46.2
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 2.0e-44 183.7 204 52.0
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 2.7e-44 183.3 200 50.5
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 4.5e-44 182.6 198 50.0
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 7.8e-44 181.8 206 49.0
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 1.7e-43 180.6 201 48.3
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 8.6e-43 178.3 197 51.8
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 1.9e-42 177.2 239 44.8
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 4.3e-42 176.0 211 46.9
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 4.3e-42 176.0 195 49.7
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 6.1e-41 172.2 220 50.0
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 5.2e-40 169.1 196 50.5
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 6.8e-40 168.7 110 77.3
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 1.5e-39 167.5 221 47.1
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 2.0e-39 167.2 212 49.1
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 2.6e-39 166.8 171 50.3
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 3.4e-39 166.4 215 47.0
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 4.4e-39 166.0 217 45.6
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 6.4e-38 162.2 202 50.0
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 6.4e-38 162.2 241 40.7
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 1.9e-37 160.6 229 43.7
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 3.2e-37 159.8 219 44.3
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 2.0e-36 157.1 218 44.0
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 3.0e-35 153.3 200 46.0
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 8.6e-35 151.8 117 65.0
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 1.9e-34 150.6 217 42.9
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 3.3e-34 149.8 214 43.0
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 7.3e-34 148.7 173 48.0
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 8.0e-33 145.2 213 40.8
arahy.Tifrunner.gnm1.ann1.FJ4QJG Arachis hypogaea HOM05D004487 ORTHO05D005483 1.1e-32 144.8 82 92.7
arahy.Tifrunner.gnm1.ann1.94164M Arachis hypogaea HOM05D004487 ORTHO05D005483 3.1e-32 143.3 82 91.5
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 4.0e-32 142.9 218 41.3
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 6.8e-32 142.1 199 44.7
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 2.6e-31 140.2 202 41.6
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 5.8e-31 139.0 187 46.5
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 7.5e-31 138.7 218 41.7
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 2.9e-30 136.7 184 41.3
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 1.1e-29 134.8 143 53.1
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 1.2e-28 131.3 221 42.1
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 1.6e-28 131.0 137 52.6
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 2.7e-28 130.2 195 41.5
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 7.8e-28 128.6 145 46.2
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 1.3e-27 127.9 196 40.8
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 3.9e-27 126.3 212 38.2
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea HOM05D004487 ORTHO05D005483 8.6e-27 125.2 111 64.0
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 1.5e-26 124.4 215 40.0
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 3.6e-25 119.8 199 41.7
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 3.1e-24 116.7 133 46.6
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 4.0e-24 116.3 220 35.5
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 5.2e-24 115.9 98 65.3
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 6.8e-24 115.5 201 36.8
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 2.0e-23 114.0 83 65.1
arahy.Tifrunner.gnm1.ann1.X4R883 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.6e-23 113.6 58 93.1
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 2.2e-22 110.5 152 42.8
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 3.1e-16 90.1 155 36.1
Lalb_Chr12g0203581 Lupinus albus HOM05D004487 ORTHO05D005483 8.9e-16 88.6 113 48.7
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 8.4e-14 82.0 132 38.6
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 7.8e-12 75.5 158 33.5
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 5.1e-11 72.8 92 43.5
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 2.5e-10 70.5 50 78.0
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.3e-09 68.2 39 89.7
ATR0730G218 Amborella trichopoda HOM05D004487 ORTHO05D005483 2.0e-07 60.8 123 34.1
BcaNung00884 Brassica carinata HOM05D004487 ORTHO05D032747 8.4e-06 55.5 73 41.1


User provided reference genes

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