Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.NRF80E Arachis hypogaea HOM05D000028 ORTHO05D083783 3.2e-34 147.9 76 100.0
Haze_14648 Corylus avellana HOM05D000028 ORTHO05D000390 8.7e-08 60.1 43 74.4
QL02p077314 Quercus lobata HOM05D000028 ORTHO05D000390 1.1e-07 59.7 44 75.0
QL02p077352 Quercus lobata HOM05D000028 ORTHO05D000390 1.1e-07 59.7 44 72.7
QL02p077234 Quercus lobata HOM05D000028 ORTHO05D000390 1.9e-07 58.9 43 67.4
Glyma.08G339700 Glycine max HOM05D000028 ORTHO05D000390 5.6e-07 57.4 53 60.4
QL02p077299 Quercus lobata HOM05D000028 ORTHO05D000390 5.6e-07 57.4 46 69.6
Cfa007453 Carpinus fangiana HOM05D000028 ORTHO05D000390 9.6e-07 56.6 44 70.5
Prupe.3G281000 Prunus persica HOM05D000028 ORTHO05D000390 9.6e-07 56.6 58 50.0
QL02p077333 Quercus lobata HOM05D000028 ORTHO05D000390 1.2e-06 56.2 44 70.5
TWI36G0765 Tripterygium wilfordii HOM05D000028 ORTHO05D000390 1.2e-06 56.2 51 54.9
arahy.Tifrunner.gnm1.ann1.N36KAR Arachis hypogaea HOM05D000028 ORTHO05D000390 3.6e-06 54.7 53 54.7
BraA04t16972Z Brassica rapa HOM05D004423 ORTHO05D005464 3.6e-06 54.7 44 63.6
Carub.0007s2632 Capsella rubella HOM05D000028 ORTHO05D000390 4.7e-06 54.3 46 63.0
FAN02G0636 Fragaria x ananassa HOM05D000028 ORTHO05D000390 4.7e-06 54.3 53 52.8
Cc07_g18600 Coffea canephora HOM05D000028 ORTHO05D000390 6.2e-06 53.9 41 63.4
Aqoxy3G00943 Aquilegia oxysepala HOM05D000028 ORTHO05D000390 8.1e-06 53.5 84 36.9
arahy.Tifrunner.gnm1.ann1.JE1DSD Arachis hypogaea HOM05D000028 ORTHO05D000390 8.1e-06 53.5 53 54.7
A04p13130 Brassica napus HOM05D004423 ORTHO05D005464 8.1e-06 53.5 44 61.4
MD17G1038100 Malus domestica HOM05D000028 ORTHO05D000390 8.1e-06 53.5 50 50.0
Phvul.008G152900 Phaseolus vulgaris HOM05D000028 ORTHO05D000390 8.1e-06 53.5 46 63.0
RcHm_v2.0_Chr2g0170801 Rosa chinensis HOM05D000028 ORTHO05D000390 8.1e-06 53.5 40 65.0
Sp7g01740 Schrenkiella parvula HOM05D000028 ORTHO05D000390 8.1e-06 53.5 46 60.9


User provided reference genes

Program Settings