Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 3.4e-84 315.5 224 100.0
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 1.0e-80 303.9 224 97.3
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 7.4e-31 138.3 245 62.0
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 7.9e-25 118.2 241 59.3
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 2.3e-24 116.7 251 56.2
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 2.8e-22 109.8 242 57.0
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 1.4e-21 107.5 260 53.5
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 6.9e-21 105.1 254 54.3
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 1.5e-20 104.0 229 58.5
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 5.0e-19 99.0 224 58.0
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 5.5e-18 95.5 249 56.6
Lalb_Chr07g0181961 Lupinus albus HOM05D007634 ORTHO05D004310 2.7e-17 93.2 230 57.0
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 3.6e-17 92.8 227 44.9
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 7.9e-17 91.7 202 59.9
Psat4g021760 Pisum sativum HOM05D007634 ORTHO05D004310 6.7e-16 88.6 189 59.8
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 1.9e-15 87.0 238 57.6
Medtr4g122710 Medicago truncatula HOM05D007634 ORTHO05D004310 2.5e-15 86.7 229 54.6
Ca_21412_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 3.3e-15 86.3 250 53.6
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 3.3e-15 86.3 253 49.0
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 4.3e-15 85.9 249 52.2
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 1.8e-13 80.5 208 59.1
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 2.0e-12 77.0 237 55.7
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 2.6e-12 76.6 245 37.1
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 2.9e-11 73.2 255 49.8
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 3.8e-11 72.8 254 50.0
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 6.5e-11 72.0 224 54.9
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 8.5e-11 71.6 99 45.5
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 8.5e-11 71.6 257 48.6
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 2.5e-10 70.1 223 52.9
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 1.2e-09 67.8 253 47.8
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 1.6e-09 67.4 87 48.3
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 2.1e-09 67.0 58 56.9
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 2.1e-09 67.0 81 48.1
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 2.1e-09 67.0 258 46.9
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 7.9e-09 65.1 91 39.6
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 1.0e-08 64.7 89 48.3
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 1.0e-08 64.7 85 45.9
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.0e-08 64.7 68 52.9
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 1.0e-08 64.7 253 49.4
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.8e-08 63.9 87 42.5
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 3.0e-08 63.2 75 42.7
Glyma.17G035900 Glycine max HOM05D007634 ORTHO05D004310 3.0e-08 63.2 183 57.9
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 3.9e-08 62.8 256 44.9
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 3.9e-08 62.8 89 44.9
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 3.9e-08 62.8 89 44.9
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 5.1e-08 62.4 258 45.7
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 5.1e-08 62.4 80 48.8
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 1.1e-07 61.2 86 44.2
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 1.1e-07 61.2 80 43.8
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 1.1e-07 61.2 88 38.6
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 1.5e-07 60.8 258 45.7
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 1.5e-07 60.8 86 41.9
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 1.5e-07 60.8 89 41.6
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.0e-07 60.5 242 47.9
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 2.6e-07 60.1 252 48.4
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 2.6e-07 60.1 85 37.6
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 4.4e-07 59.3 86 41.9
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 9.7e-07 58.2 87 40.2
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 1.3e-06 57.8 252 49.2
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 1.7e-06 57.4 91 42.9
Lsat_1_v5_gn_6_116040 Lactuca sativa HOM05D031577 ORTHO05D004310 2.2e-06 57.0 79 50.6
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 2.2e-06 57.0 246 46.7
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 2.8e-06 56.6 242 46.3
ECA246G0838 Erigeron canadensis HOM05D031577 ORTHO05D004310 4.8e-06 55.8 79 43.0
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 8.2e-06 55.1 81 37.0


User provided reference genes

Program Settings