Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 3.2e-292 1007.7 503 100.0
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 3.5e-254 881.3 503 90.1
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 3.5e-174 615.5 505 64.8
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 6.0e-174 614.8 497 66.6
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 2.0e-169 599.7 496 66.1
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.1e-164 583.9 519 61.8
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 1.1e-162 577.4 498 62.2
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 1.4e-159 567.0 509 61.9
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 3.6e-158 562.4 489 62.8
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 7.9e-158 561.2 470 64.3
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 7.4e-156 554.7 528 58.5
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 4.1e-154 548.9 517 60.0
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.0e-149 534.3 492 61.6
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 7.3e-95 352.1 493 45.4
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 2.1e-94 350.5 464 48.1
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 3.2e-90 336.7 526 43.9
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 7.8e-89 332.0 460 45.4
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 1.9e-87 327.4 434 46.3
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 9.5e-87 325.1 460 47.0
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 9.5e-87 325.1 460 47.0
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 9.5e-87 325.1 387 50.1
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 1.8e-85 320.9 329 59.0
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 4.4e-84 316.2 437 46.7
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 7.6e-84 315.5 335 55.8
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 9.9e-84 315.1 432 48.1
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 1.3e-83 314.7 328 56.7
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 1.7e-83 314.3 440 46.6
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 1.7e-83 314.3 326 57.1
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 2.2e-83 313.9 458 41.7
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 2.9e-83 313.5 329 54.7
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 2.9e-83 313.5 326 56.7
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 8.4e-83 312.0 402 48.0
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 8.4e-83 312.0 492 42.9
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 1.9e-82 310.8 352 54.3
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 1.9e-82 310.8 331 55.6
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 9.2e-82 308.5 333 55.9
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 1.6e-81 307.8 332 54.2
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 6.0e-81 305.8 404 47.5
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 6.0e-81 305.8 316 56.6
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 7.8e-81 305.4 328 53.7
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 7.8e-81 305.4 336 54.8
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 1.3e-80 304.7 321 54.2
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 1.3e-80 304.7 326 54.3
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 1.7e-80 304.3 332 55.7
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 2.3e-80 303.9 377 47.5
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 3.0e-80 303.5 317 56.8
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 5.1e-80 302.8 334 54.2
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 5.1e-80 302.8 334 54.2
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 8.7e-80 302.0 408 47.5
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 8.7e-80 302.0 332 55.7
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 1.1e-79 301.6 328 54.9
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 1.1e-79 301.6 331 55.6
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 1.9e-79 300.8 455 44.0
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 3.3e-79 300.1 324 54.0
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 3.3e-79 300.1 332 54.5
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 3.3e-79 300.1 330 55.2
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 4.3e-79 299.7 331 54.4
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 5.6e-79 299.3 330 53.3
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 5.6e-79 299.3 315 56.2
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 7.3e-79 298.9 455 43.7
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 7.3e-79 298.9 328 53.4
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.2e-78 298.1 328 56.1
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 1.6e-78 297.7 363 50.4
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 1.6e-78 297.7 320 55.3
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 3.6e-78 296.6 311 49.5
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 3.6e-78 296.6 329 55.6
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 3.6e-78 296.6 320 54.7
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 3.6e-78 296.6 325 52.3
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 6.2e-78 295.8 318 54.4
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 6.2e-78 295.8 369 46.6
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 6.2e-78 295.8 313 56.9
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 6.2e-78 295.8 356 52.8
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 8.1e-78 295.4 320 52.5
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 2.4e-77 293.9 324 53.4
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 4.0e-77 293.1 328 53.4
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 4.0e-77 293.1 328 53.4
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 5.2e-77 292.7 324 53.7
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 6.9e-77 292.4 326 53.4
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 1.5e-76 291.2 322 53.4
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 7.6e-76 288.9 315 54.0
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 7.6e-76 288.9 318 48.7
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.7e-75 287.7 400 44.0
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 2.9e-75 287.0 316 54.1
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 2.9e-75 287.0 312 51.3
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 4.9e-75 286.2 268 51.1
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 4.9e-75 286.2 328 52.4
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 6.4e-75 285.8 329 49.5
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 1.4e-74 284.6 328 52.1
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 3.2e-74 283.5 318 52.5
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 3.2e-74 283.5 314 52.2
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 5.4e-74 282.7 324 50.9
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 7.1e-74 282.3 324 48.5
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 1.2e-73 281.6 323 51.7
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 2.1e-73 280.8 338 49.1
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 2.7e-73 280.4 316 51.6
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 2.7e-73 280.4 318 52.5
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 2.7e-73 280.4 331 50.2
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 2.7e-73 280.4 326 50.0
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 2.7e-73 280.4 331 52.0
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 3.5e-73 280.0 327 49.8
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 7.8e-73 278.9 320 51.2
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 7.8e-73 278.9 318 50.9
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 1.3e-72 278.1 333 49.5
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.7e-72 277.7 317 51.7
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 3.9e-72 276.6 312 52.2
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 8.7e-72 275.4 321 49.8
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 1.9e-71 274.2 335 48.7
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 3.3e-71 273.5 315 45.1
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 4.3e-71 273.1 313 50.8
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 4.3e-71 273.1 319 49.2
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 5.6e-71 272.7 388 45.1
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 7.3e-71 272.3 318 45.9
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 1.6e-70 271.2 335 48.7
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 1.6e-70 271.2 466 40.6
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 1.6e-70 271.2 330 49.4
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.8e-70 270.4 345 50.4
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 3.6e-70 270.0 330 49.7
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 6.2e-70 269.2 201 60.2
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 6.2e-70 269.2 315 54.3
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 3.1e-69 266.9 386 41.2
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 3.1e-69 266.9 188 63.8
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 3.1e-69 266.9 339 49.6
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 6.9e-69 265.8 317 45.4
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 6.9e-69 265.8 325 51.1
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 6.9e-69 265.8 315 51.1
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 4.5e-68 263.1 211 58.8
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 5.8e-68 262.7 189 62.4
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 5.8e-68 262.7 189 62.4
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 5.8e-68 262.7 189 62.4
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 5.8e-68 262.7 189 62.4
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 5.8e-68 262.7 189 62.4
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 9.9e-68 261.9 320 45.6
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 1.3e-67 261.5 185 64.3
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 2.9e-67 260.4 189 61.9
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 3.8e-67 260.0 189 61.4
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 8.4e-67 258.8 311 48.9
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 2.3e-64 250.8 310 49.4
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 2.3e-64 250.8 387 39.5
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 2.3e-64 250.8 304 52.6
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 1.1e-63 248.4 336 41.4
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 2.1e-62 244.2 315 43.5
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 2.4e-61 240.7 387 43.7
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 3.1e-61 240.4 306 52.0
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.2e-60 238.4 299 49.5
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.3e-59 235.0 278 46.4
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 4.9e-59 233.0 327 43.4
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 1.4e-58 231.5 312 40.1
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.4e-58 230.7 287 51.9
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 4.6e-57 226.5 149 67.1
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 3.3e-55 220.3 169 56.2
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 9.0e-53 212.2 225 50.2
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 9.0e-53 212.2 313 42.8
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 1.1e-50 205.3 380 38.2
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.1e-50 205.3 276 50.7
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 1.0e-43 182.2 308 40.3
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 5.0e-43 179.9 261 41.4
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.5e-42 177.6 327 41.9
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.7e-41 174.1 193 49.2
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 3.6e-41 173.7 189 41.8
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 6.7e-40 169.5 212 43.9
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.1e-37 160.6 97 76.3
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 2.2e-35 154.5 214 35.5
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 3.6e-25 120.6 74 71.6
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 5.7e-23 113.2 74 66.2
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 1.8e-16 91.7 116 38.8
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 8.5e-11 72.8 38 76.3
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 3.2e-10 70.9 37 75.7


User provided reference genes

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