Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.N85NDT Arachis hypogaea HOM05D000456 ORTHO05D086402 1.4e-72 276.2 142 100.0
arahy.Tifrunner.gnm1.ann1.82PDD7 Arachis hypogaea HOM05D000456 ORTHO05D000916 1.1e-11 73.9 62 69.4
arahy.Tifrunner.gnm1.ann1.GV9VS9 Arachis hypogaea HOM05D000456 ORTHO05D000916 1.1e-11 73.9 62 69.4
arahy.Tifrunner.gnm1.ann1.ISB7YF Arachis hypogaea HOM05D000456 ORTHO05D000916 3.8e-09 65.5 51 60.8
arahy.Tifrunner.gnm1.ann1.ZEH3NP Arachis hypogaea HOM05D000456 ORTHO05D000916 3.8e-09 65.5 51 60.8
arahy.Tifrunner.gnm1.ann1.LTSE8R Arachis hypogaea HOM05D000456 ORTHO05D000916 1.5e-08 63.5 31 100.0
Cpa.g.sc138.2 Carica papaya HOM05D000456 ORTHO05D000916 1.9e-08 63.2 65 52.3
Gorai.008G147200 Gossypium raimondii HOM05D000456 ORTHO05D000916 2.5e-08 62.8 58 56.9
Gohir.A12G132400 Gossypium hirsutum HOM05D000456 ORTHO05D000916 7.3e-08 61.2 58 55.2
MSTRG.2071 Avicennia marina HOM05D000456 ORTHO05D000916 9.5e-08 60.8 52 59.6
Haze_17413 Corylus avellana HOM05D000456 ORTHO05D000916 9.5e-08 60.8 46 67.4
SalBow2G1670 Salvia bowleyana HOM05D000456 ORTHO05D000916 9.5e-08 60.8 52 57.7
Cpa.g.sc138.1 Carica papaya HOM05D000456 ORTHO05D000916 1.6e-07 60.1 87 46.0
Cc00_g20830 Coffea canephora HOM05D000456 ORTHO05D000916 1.6e-07 60.1 62 50.0
Lj5g0002270 Lotus japonicus HOM05D000456 ORTHO05D000916 2.1e-07 59.7 44 68.2
Oeu062418.1 Olea europaea HOM05D000456 ORTHO05D000916 2.1e-07 59.7 45 62.2
QL01p000861 Quercus lobata HOM05D000456 ORTHO05D000916 2.1e-07 59.7 44 65.9
Duzib132G0749 Durio zibethinus HOM05D000456 ORTHO05D000916 2.8e-07 59.3 58 53.4
Gohir.A03G166800 Gossypium hirsutum HOM05D000456 ORTHO05D000916 2.8e-07 59.3 54 59.3
GSVIVG01034412001 Vitis vinifera HOM05D000456 ORTHO05D000916 2.8e-07 59.3 65 50.8
Cc00_g22290 Coffea canephora HOM05D000456 ORTHO05D000916 3.6e-07 58.9 44 61.4
Duzib052G0498 Durio zibethinus HOM05D000456 ORTHO05D000916 3.6e-07 58.9 58 51.7
Gohir.D13G059800 Gossypium hirsutum HOM05D000456 ORTHO05D000916 3.6e-07 58.9 44 63.6
Gohir.D13G059966 Gossypium hirsutum HOM05D000456 ORTHO05D047566 3.6e-07 58.9 49 59.2
Gorai.013G067700 Gossypium raimondii HOM05D000456 ORTHO05D000916 3.6e-07 58.9 44 63.6
CiPaw.15G001800 Carya illinoinensis HOM05D000456 ORTHO05D000916 4.7e-07 58.5 44 65.9
Gohir.A13G062000 Gossypium hirsutum HOM05D000456 ORTHO05D000916 4.7e-07 58.5 44 63.6
Gohir.A13G062100 Gossypium hirsutum HOM05D000456 ORTHO05D000916 4.7e-07 58.5 44 63.6
Gohir.D02G189700 Gossypium hirsutum HOM05D000456 ORTHO05D000916 4.7e-07 58.5 44 63.6
Gohir.D13G059900 Gossypium hirsutum HOM05D000456 ORTHO05D000916 4.7e-07 58.5 44 63.6
Gorai.005G212500 Gossypium raimondii HOM05D000456 ORTHO05D000916 4.7e-07 58.5 44 63.6
Gorai.013G067800 Gossypium raimondii HOM05D000456 ORTHO05D000916 4.7e-07 58.5 44 63.6
Migut.E00680 Erythranthe guttata HOM05D000456 ORTHO05D000916 6.1e-07 58.2 44 63.6
Gorai.013G067900 Gossypium raimondii HOM05D000456 ORTHO05D047566 6.1e-07 58.2 49 59.2
Oeu062412.2 Olea europaea HOM05D000456 ORTHO05D000916 6.1e-07 58.2 45 60.0
Potri.005G088300 Populus trichocarpa HOM05D000456 ORTHO05D000916 6.1e-07 58.2 55 54.5
Potri.005G088400 Populus trichocarpa HOM05D000456 ORTHO05D000916 6.1e-07 58.2 55 54.5
Cfa008779 Carpinus fangiana HOM05D000456 ORTHO05D000916 8.0e-07 57.8 44 59.1
Ciclev10033826m.g Citrus clementina HOM05D000456 ORTHO05D000916 8.0e-07 57.8 55 52.7
Haze_11791 Corylus avellana HOM05D000456 ORTHO05D000916 8.0e-07 57.8 44 59.1
Duzib248G0549 Durio zibethinus HOM05D000456 ORTHO05D000916 8.0e-07 57.8 44 61.4
Migut.E00679 Erythranthe guttata HOM05D000456 ORTHO05D000916 8.0e-07 57.8 44 61.4
Gohir.A03G166500 Gossypium hirsutum HOM05D000456 ORTHO05D000916 8.0e-07 57.8 44 63.6
Gohir.D12G136000 Gossypium hirsutum HOM05D000456 ORTHO05D000916 8.0e-07 57.8 58 53.4
Lj6A708T56 Lonicera japonica HOM05D000456 ORTHO05D000916 8.0e-07 57.8 43 62.8
Lj6A713T70 Lonicera japonica HOM05D000456 ORTHO05D000916 8.0e-07 57.8 43 62.8
Lalb_Chr02g0143681 Lupinus albus HOM05D000456 ORTHO05D000916 8.0e-07 57.8 62 58.1
Rhsim12G0089500 Rhododendron simsii HOM05D000456 ORTHO05D000916 8.0e-07 57.8 44 59.1
MSTRG.2070 Avicennia marina HOM05D000456 ORTHO05D000916 1.4e-06 57.0 52 55.8
Oeu062406.1 Olea europaea HOM05D000456 ORTHO05D000916 1.4e-06 57.0 45 57.8
Thecc.02G154300 Theobroma cacao HOM05D000456 ORTHO05D000916 1.4e-06 57.0 58 51.7
Prupe.1G349500 Prunus persica HOM05D000456 ORTHO05D000916 1.8e-06 56.6 56 51.8
Sabra05G0072800 Salix brachista HOM05D000456 ORTHO05D000916 1.8e-06 56.6 55 52.7
Solyc11g011580.2 Solanum lycopersicum HOM05D000456 ORTHO05D000916 1.8e-06 56.6 44 59.1
Sopen04g004130 Solanum pennellii HOM05D000456 ORTHO05D000916 1.8e-06 56.6 44 59.1
Ciclev10032805m.g Citrus clementina HOM05D000456 ORTHO05D000916 2.3e-06 56.2 55 50.9
Solyc04g008950.4 Solanum lycopersicum HOM05D000456 ORTHO05D000916 2.3e-06 56.2 45 55.6
TWI77G0186 Tripterygium wilfordii HOM05D000456 ORTHO05D000916 2.3e-06 56.2 51 54.9
Eucgr.G02590 Eucalyptus grandis HOM05D000456 ORTHO05D000916 3.0e-06 55.8 54 53.7
MBI06_g27482_MAGBIO Magnolia biondii HOM05D000456 ORTHO05D000916 3.0e-06 55.8 36 72.2
Sopen04g004120 Solanum pennellii HOM05D000456 ORTHO05D000916 3.0e-06 55.8 44 56.8
vmacro15998 Vaccinium macrocarpon HOM05D000456 ORTHO05D000916 3.0e-06 55.8 44 56.8
VMungo0720G1631 Vigna mungo HOM05D000456 ORTHO05D000916 3.0e-06 55.8 62 53.2
CANSAT78G0389 Cannabis sativa HOM05D000456 ORTHO05D000916 4.0e-06 55.5 83 43.4
Gohir.A03G166300 Gossypium hirsutum HOM05D000456 ORTHO05D000916 4.0e-06 55.5 44 61.4
Gohir.D02G189600 Gossypium hirsutum HOM05D000456 ORTHO05D000916 4.0e-06 55.5 44 61.4
Gohir.D02G189900 Gossypium hirsutum HOM05D000456 ORTHO05D000916 4.0e-06 55.5 44 61.4
Gorai.005G212400 Gossypium raimondii HOM05D000456 ORTHO05D000916 4.0e-06 55.5 44 61.4
Gorai.005G212700 Gossypium raimondii HOM05D000456 ORTHO05D000916 4.0e-06 55.5 44 61.4
Lj6A713T69 Lonicera japonica HOM05D000456 ORTHO05D000916 4.0e-06 55.5 43 58.1
arahy.Tifrunner.gnm1.ann1.GIYJ66 Arachis hypogaea HOM05D000456 ORTHO05D000916 5.2e-06 55.1 75 48.0
arahy.Tifrunner.gnm1.ann1.SX57S8 Arachis hypogaea HOM05D000456 ORTHO05D000916 5.2e-06 55.1 75 48.0
Migut.L00804 Erythranthe guttata HOM05D000456 ORTHO05D000916 5.2e-06 55.1 44 59.1
Gohir.A03G166600 Gossypium hirsutum HOM05D000456 ORTHO05D000916 5.2e-06 55.1 44 61.4
Phvul.007G014000 Phaseolus vulgaris HOM05D000456 ORTHO05D000916 5.2e-06 55.1 40 62.5
TPR.G4079 Trifolium pratense HOM05D000456 ORTHO05D000916 5.2e-06 55.1 71 52.1
unitig_52.g17305 Utricularia gibba HOM05D000456 ORTHO05D000916 5.2e-06 55.1 44 56.8
vmacro16001 Vaccinium macrocarpon HOM05D000456 ORTHO05D000916 5.2e-06 55.1 43 58.1
CAN.G274.18 Capsicum annuum HOM05D000456 ORTHO05D000916 6.8e-06 54.7 44 54.5
Cc00_g01920 Coffea canephora HOM05D000456 ORTHO05D000916 6.8e-06 54.7 41 61.0
Cc00_g12050 Coffea canephora HOM05D000456 ORTHO05D000916 6.8e-06 54.7 44 56.8
MELO3C005070.2 Cucumis melo HOM05D000456 ORTHO05D000916 6.8e-06 54.7 44 61.4
CsaV3_5G020770 Cucumis sativus L. HOM05D000456 ORTHO05D000916 6.8e-06 54.7 44 61.4
Gohir.D02G189800 Gossypium hirsutum HOM05D000456 ORTHO05D000916 6.8e-06 54.7 43 62.8
Gorai.005G212600 Gossypium raimondii HOM05D000456 ORTHO05D000916 6.8e-06 54.7 43 62.8
Gorai.005G212800 Gossypium raimondii HOM05D000456 ORTHO05D000916 6.8e-06 54.7 43 62.8
Lalb_Chr02g0143671 Lupinus albus HOM05D000456 ORTHO05D000916 6.8e-06 54.7 42 64.3
Lalb_Chr06g0163971 Lupinus albus HOM05D000456 ORTHO05D000916 6.8e-06 54.7 42 64.3
Nitab4.5_0004979g0130 Nicotiana tabacum HOM05D000456 ORTHO05D000916 6.8e-06 54.7 44 54.5
CAN.G274.17 Capsicum annuum HOM05D000456 ORTHO05D000916 8.9e-06 54.3 44 54.5
Dinv17649 Davidia involucrata HOM05D000456 ORTHO05D000916 8.9e-06 54.3 45 57.8
Gohir.D02G190000 Gossypium hirsutum HOM05D000456 ORTHO05D000916 8.9e-06 54.3 43 62.8
Manes.04G162500 Manihot esculenta HOM05D000456 ORTHO05D000916 8.9e-06 54.3 62 48.4
Peaxi162Scf00681g00332 Petunia axillaris HOM05D000456 ORTHO05D000916 8.9e-06 54.3 44 56.8
Solyc04g008940.4 Solanum lycopersicum HOM05D000456 ORTHO05D000916 8.9e-06 54.3 44 56.8


User provided reference genes

Program Settings