Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 1.4e-205 719.5 395 100.0
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 1.1e-191 673.3 394 93.9
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 8.7e-35 152.1 368 35.1
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 8.7e-35 152.1 368 35.1
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 1.4e-32 144.8 395 32.2
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 3.1e-32 143.7 415 34.0
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 2.5e-29 134.0 396 31.3
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.7e-28 130.6 345 32.5
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 3.5e-28 130.2 422 30.1
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 7.9e-28 129.0 406 28.8
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 3.3e-26 123.6 349 30.9
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 3.3e-26 123.6 381 31.5
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 4.3e-26 123.2 362 29.6
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 7.4e-26 122.5 349 32.4
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.3e-25 121.7 463 29.6
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 3.7e-25 120.2 350 32.3
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 4.8e-25 119.8 336 32.4
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 8.2e-25 119.0 465 31.2
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.5e-23 114.8 269 29.7
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 5.8e-23 112.8 482 28.6
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 1.0e-22 112.1 393 31.0
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.3e-22 111.7 419 29.1
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 2.2e-22 110.9 353 30.3
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 3.8e-22 110.2 257 32.7
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 4.9e-22 109.8 400 29.8
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 4.9e-22 109.8 326 31.9
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 6.5e-22 109.4 442 26.5
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 8.4e-22 109.0 368 29.9
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 8.4e-22 109.0 337 32.3
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.4e-21 108.2 393 31.0
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 1.9e-21 107.8 210 34.3
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 4.2e-21 106.7 327 28.7
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 5.5e-21 106.3 354 29.9
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 9.3e-21 105.5 315 31.1
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.6e-20 104.8 354 28.5
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 2.1e-20 104.4 384 29.7
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 2.1e-20 104.4 337 30.3
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 3.5e-20 103.6 392 31.9
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 4.6e-20 103.2 444 28.2
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 7.9e-20 102.4 408 30.1
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 1.0e-19 102.1 412 27.9
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 1.3e-19 101.7 216 35.2
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 2.3e-19 100.9 323 31.6
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 1.1e-18 98.6 340 28.8
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.9e-18 97.8 463 28.7
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 2.5e-18 97.4 323 31.0
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 2.5e-18 97.4 398 29.1
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 2.5e-18 97.4 472 28.8
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 4.3e-18 96.7 323 31.0
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 1.6e-17 94.7 338 27.8
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 2.2e-17 94.4 334 29.9
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 4.8e-17 93.2 327 31.5
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 1.1e-16 92.0 348 29.6
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.1e-16 92.0 216 31.5
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.4e-16 91.7 218 31.2
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 1.8e-16 91.3 334 27.8
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 4.1e-16 90.1 373 29.8
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.3e-16 89.7 353 28.0
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 5.3e-16 89.7 349 29.2
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 5.3e-16 89.7 351 27.1
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 9.0e-16 89.0 389 29.8
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.2e-15 88.6 324 30.6
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 3.4e-15 87.0 443 24.6
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 3.4e-15 87.0 371 27.5
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 1.3e-14 85.1 288 27.8
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 1.3e-14 85.1 249 31.3
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 2.2e-14 84.3 308 29.2
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 3.8e-14 83.6 333 27.6
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 5.0e-14 83.2 349 28.4
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 6.5e-14 82.8 284 27.8
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 8.5e-14 82.4 197 31.0
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.4e-13 81.6 340 25.6
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.9e-13 81.3 206 33.5
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 2.5e-13 80.9 163 33.1
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.5e-13 80.9 266 32.0
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 3.2e-13 80.5 223 30.0
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 5.5e-13 79.7 214 28.5
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 5.5e-13 79.7 361 24.4
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.2e-12 78.6 223 30.9
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 2.7e-12 77.4 369 27.4
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 4.6e-12 76.6 319 27.0
Nitab4.5_0002290g0120 Nicotiana tabacum HOM05D003426 ORTHO05D003816 6.1e-12 76.3 195 31.8
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.0e-11 75.5 349 26.9
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 2.3e-11 74.3 409 28.6
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 2.3e-11 74.3 199 33.2
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 3.0e-11 73.9 430 28.1
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 5.1e-11 73.2 225 28.4
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 6.7e-11 72.8 251 30.7
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.5e-10 71.6 328 26.8
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 1.5e-10 71.6 384 24.0
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 2.0e-10 71.2 324 26.5
RcHm_v2.0_Chr6g0270151 Rosa chinensis HOM05D000650 ORTHO05D007302 3.3e-10 70.5 191 25.1
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.3e-10 70.1 374 26.2
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 5.7e-10 69.7 331 24.2
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 9.7e-10 68.9 224 27.7
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 9.7e-10 68.9 260 30.4
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 1.3e-09 68.6 388 24.5
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.7e-09 68.2 228 25.9
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 2.2e-09 67.8 191 28.3
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 2.2e-09 67.8 182 30.8
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 2.8e-09 67.4 85 43.5
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 3.7e-09 67.0 222 28.8
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 3.7e-09 67.0 194 32.5
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 6.3e-09 66.2 217 30.4
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 8.2e-09 65.9 372 23.9
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 8.2e-09 65.9 225 27.6
Dinv24138 Davidia involucrata HOM05D000650 ORTHO05D007302 8.2e-09 65.9 205 26.8
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 1.1e-08 65.5 366 27.0
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.1e-08 65.5 199 29.1
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 1.4e-08 65.1 340 27.4
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 1.4e-08 65.1 211 27.5
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 1.8e-08 64.7 177 30.5
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 2.4e-08 64.3 311 23.5
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.4e-08 64.3 386 24.6
Sed0017290 Sechium edule HOM05D003426 ORTHO05D003816 3.1e-08 63.9 209 28.7
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 4.1e-08 63.5 174 27.6
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 4.1e-08 63.5 218 29.4
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 6.9e-08 62.8 334 24.6
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.2e-07 62.0 204 29.4
Aqoxy6G00819 Aquilegia oxysepala HOM05D000650 ORTHO05D000735 1.2e-07 62.0 218 25.7
Sed0007563 Sechium edule HOM05D003426 ORTHO05D003816 1.2e-07 62.0 327 23.2
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.0e-07 61.2 217 29.0
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 3.4e-07 60.5 288 24.7
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.5e-07 60.1 337 23.4
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 5.9e-07 59.7 356 25.3
Prupe.8G072900 Prunus persica HOM05D000650 ORTHO05D007302 5.9e-07 59.7 156 25.6
PGSC0003DMG400038550 Solanum tuberosum HOM05D003426 ORTHO05D003816 5.9e-07 59.7 87 37.9
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 7.7e-07 59.3 204 27.5
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.2e-06 57.8 325 25.8
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 2.2e-06 57.8 234 24.4
vmacro01871 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 2.2e-06 57.8 165 27.3
Gorai.005G226700 Gossypium raimondii HOM05D000650 ORTHO05D007302 2.9e-06 57.4 193 24.9
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.9e-06 57.4 189 30.2
Manes.10G096200 Manihot esculenta HOM05D000650 ORTHO05D014428 3.8e-06 57.0 206 26.2
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 6.5e-06 56.2 340 24.7
Migut.B00537 Erythranthe guttata HOM05D000650 ORTHO05D000735 6.5e-06 56.2 227 24.2
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 6.5e-06 56.2 202 25.2
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 8.5e-06 55.8 349 24.9


User provided reference genes

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