Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.N1DH3R Arachis hypogaea HOM05D001966 ORTHO05D007227 5.0e-41 170.6 84 100.0
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 3.1e-14 81.6 58 72.4
arahy.Tifrunner.gnm1.ann1.6ZZ12G Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-13 79.7 58 70.7
arahy.Tifrunner.gnm1.ann1.77ZW6W Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-13 79.7 58 70.7
arahy.Tifrunner.gnm1.ann1.EGZ6K4 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-13 79.7 58 70.7
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-13 79.7 58 70.7
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-13 79.7 58 70.7
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.2e-13 79.7 58 70.7
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 2.0e-13 79.0 56 71.4
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 2.6e-13 78.6 58 70.7
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 2.6e-13 78.6 58 69.0
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 4.4e-13 77.8 58 69.0
Potri.011G074201 Populus trichocarpa HOM05D001966 ORTHO05D007227 1.3e-12 76.3 58 69.0
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 1.7e-12 75.9 58 67.2
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.7e-12 75.9 58 67.2
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 1.7e-12 75.9 58 67.2
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 1.7e-12 75.9 58 67.2
arahy.Tifrunner.gnm1.ann1.I9YN8I Arachis hypogaea HOM05D001966 ORTHO05D007227 3.8e-12 74.7 58 65.5
Phvul.003G067400 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 3.8e-12 74.7 76 53.9
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 4.9e-12 74.3 58 65.5
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 6.4e-12 73.9 59 66.1
Medtr3g035620 Medicago truncatula HOM05D001966 ORTHO05D007227 6.4e-12 73.9 59 66.1
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 6.4e-12 73.9 58 65.5
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BolSC29t60539H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BolSC29t60556H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BolSC35t60713H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BolSC44t60814H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BolSC45t60900H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BolSC45t60918H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BolSC46t60967H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BolSC49t61133H Brassica oleracea HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BraSC103t45419Z Brassica rapa HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BraSC25t45921Z Brassica rapa HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BraSC59t46509Z Brassica rapa HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
BraSC59t46540Z Brassica rapa HOM05D001966 ORTHO05D007227 2.4e-11 72.0 58 63.8
ClCG11G009300 Citrullus lanatus HOM05D001966 ORTHO05D007227 2.4e-11 72.0 54 66.7
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 2.4e-11 72.0 59 66.1
Hma1.2p1_0544F.1_g175783 Hydrangea macrophylla HOM05D001966 ORTHO05D007227 3.2e-11 71.6 58 63.8
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 5.4e-11 70.9 58 62.1
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 5.4e-11 70.9 58 62.1
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 5.4e-11 70.9 58 62.1
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 5.4e-11 70.9 58 62.1
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 5.4e-11 70.9 58 62.1
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 5.4e-11 70.9 58 62.1
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 9.2e-11 70.1 58 62.1
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.2e-10 69.7 58 62.1
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 1.6e-10 69.3 50 70.0
HPP92_028385 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.6e-10 69.3 58 60.3
HPP92_028396 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.6e-10 69.3 58 60.3
HPP92_028404 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.6e-10 69.3 58 60.3
HPP92_028413 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.6e-10 69.3 58 60.3
HPP92_028421 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.6e-10 69.3 58 60.3
HPP92_028428 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.6e-10 69.3 58 60.3
HPP92_028434 Vanilla planifolia HOM05D001966 ORTHO05D007227 1.6e-10 69.3 58 60.3
HanXRQChr05g0134861 Helianthus annuus HOM05D001966 ORTHO05D007227 2.1e-10 68.9 67 56.7
Aqoxy2G01968 Aquilegia oxysepala HOM05D001966 ORTHO05D007227 2.7e-10 68.6 58 62.1
Sed0001460 Sechium edule HOM05D001966 ORTHO05D007227 3.5e-10 68.2 52 65.4
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 6.0e-10 67.4 52 65.4
DCAR_001522 Daucus carota HOM05D001966 ORTHO05D007227 6.0e-10 67.4 58 62.1
Glyma.05G084525 Glycine max HOM05D001966 ORTHO05D007227 6.0e-10 67.4 54 64.8
Glyma.08G276350 Glycine max HOM05D001966 ORTHO05D007227 7.8e-10 67.0 58 58.6
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 3.0e-09 65.1 60 60.0
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 3.0e-09 65.1 60 60.0
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 3.9e-09 64.7 60 58.3
Glyma.09G133875 Glycine max HOM05D001966 ORTHO05D007227 5.1e-09 64.3 54 64.8
BolSC29t60498H Brassica oleracea HOM05D001966 ORTHO05D007227 3.3e-08 61.6 50 62.0
BolSC35t60683H Brassica oleracea HOM05D001966 ORTHO05D007227 3.3e-08 61.6 50 62.0
BolSC44t60831H Brassica oleracea HOM05D001966 ORTHO05D007227 3.3e-08 61.6 50 62.0
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 2.1e-07 58.9 61 59.0
EL10Ac8g19705 Beta vulgaris HOM05D001966 ORTHO05D007227 4.7e-07 57.8 60 53.3
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 8.1e-07 57.0 47 61.7
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 8.1e-07 57.0 47 61.7
FvH4_c3g00070 Fragaria vesca HOM05D001966 ORTHO05D007227 8.1e-07 57.0 60 58.3
arahy.Tifrunner.gnm1.ann1.Q8ISGW Arachis hypogaea HOM05D001966 ORTHO05D007227 3.1e-06 55.1 46 63.0
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 5.2e-06 54.3 52 57.7


User provided reference genes

Program Settings