Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 1.1e-192 676.4 335 100.0
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 2.5e-176 622.1 337 93.5
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 1.2e-125 453.8 333 71.5
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 2.9e-124 449.1 334 69.2
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 6.5e-124 448.0 335 70.1
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 1.4e-123 446.8 333 71.2
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 3.6e-122 442.2 328 69.8
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 7.9e-122 441.0 335 69.3
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 7.0e-118 427.9 312 69.9
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 7.0e-118 427.9 329 67.5
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 1.0e-116 424.1 288 76.7
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.5e-115 420.2 312 68.9
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 2.4e-110 402.9 330 64.5
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 9.1e-110 401.0 338 63.9
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 2.0e-109 399.8 324 65.1
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 5.9e-109 398.3 258 74.4
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 1.0e-108 397.5 331 62.8
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 1.7e-108 396.7 278 70.1
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 6.5e-108 394.8 329 62.6
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 1.9e-107 393.3 273 70.0
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 1.9e-107 393.3 329 62.3
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 2.5e-107 392.9 276 68.8
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 2.1e-106 389.8 320 62.2
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 3.6e-106 389.0 247 76.9
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 4.7e-106 388.7 313 64.2
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 6.1e-106 388.3 311 65.6
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 8.0e-106 387.9 262 72.5
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 1.4e-105 387.1 299 65.2
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 3.0e-105 386.0 252 73.8
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 5.2e-105 385.2 252 74.2
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 5.2e-105 385.2 262 71.0
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 6.8e-105 384.8 247 75.7
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 6.8e-105 384.8 271 70.8
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 8.8e-105 384.4 335 60.9
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 1.5e-104 383.6 262 70.6
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 1.5e-104 383.6 271 69.4
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 3.4e-104 382.5 251 76.1
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 4.4e-104 382.1 262 70.6
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 7.5e-104 381.3 268 70.1
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 1.7e-103 380.2 252 74.2
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 2.2e-103 379.8 336 59.8
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 2.2e-103 379.8 314 63.1
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 2.8e-103 379.4 252 71.8
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 3.7e-103 379.0 258 70.9
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 4.8e-103 378.6 321 59.5
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 6.3e-103 378.3 256 71.1
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 3.1e-102 375.9 265 69.4
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 1.3e-100 370.5 327 61.2
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 1.7e-100 370.2 298 62.4
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 8.6e-100 367.9 285 65.6
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 1.5e-99 367.1 256 67.6
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 1.9e-99 366.7 336 57.7
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 3.2e-99 365.9 299 63.5
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 3.2e-99 365.9 264 66.3
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 1.2e-98 364.0 268 65.7
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 2.3e-97 359.8 326 57.7
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 8.8e-97 357.8 290 62.1
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 8.8e-97 357.8 244 70.9
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 8.8e-97 357.8 274 64.6
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 2.6e-96 356.3 256 67.2
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 4.4e-96 355.5 270 64.1
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 7.5e-96 354.8 303 59.1
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 9.8e-96 354.4 256 67.2
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 2.2e-95 353.2 269 64.7
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 2.8e-95 352.8 249 69.1
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 2.8e-95 352.8 243 69.5
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 3.7e-95 352.4 301 59.5
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 3.7e-95 352.4 303 60.1
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 8.3e-95 351.3 236 72.5
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 8.3e-95 351.3 234 71.4
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 1.4e-94 350.5 316 57.3
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 9.2e-94 347.8 256 65.6
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 9.2e-94 347.8 256 65.6
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 9.2e-94 347.8 256 65.6
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 3.5e-93 345.9 270 63.0
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 3.5e-93 345.9 267 63.3
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 7.8e-93 344.7 231 72.7
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 1.7e-92 343.6 337 56.1
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 2.3e-92 343.2 287 62.0
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 2.9e-92 342.8 267 63.3
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 5.0e-92 342.0 319 58.0
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 3.3e-91 339.3 269 62.1
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 2.1e-90 336.7 190 85.8
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 1.8e-89 333.6 238 66.0
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 4.9e-87 325.5 348 54.3
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 1.2e-85 320.9 244 61.9
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 1.3e-84 317.4 221 70.6
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 8.0e-82 308.1 190 78.4
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 1.4e-81 307.4 241 61.4
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 5.2e-81 305.4 253 63.6
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 8.9e-81 304.7 171 81.9
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 1.3e-79 300.8 150 96.0
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 1.7e-79 300.4 235 60.0
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 3.7e-79 299.3 283 55.1
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 3.7e-79 299.3 204 71.6
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 2.0e-77 293.5 208 69.2
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 6.0e-77 292.0 222 64.4
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 4.3e-75 285.8 301 49.2
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 9.5e-75 284.6 178 75.3
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.6e-74 283.9 188 70.2
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.4e-73 280.8 191 68.1
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 9.2e-70 268.1 182 74.7
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 1.8e-49 200.7 143 67.1
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 5.8e-48 195.7 132 73.5
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.7e-47 194.1 132 72.7
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 2.9e-47 193.4 237 42.2
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 1.4e-46 191.0 237 41.8
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.8e-44 184.1 241 44.0
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.3e-43 179.9 163 58.3
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 5.6e-43 179.1 162 54.9
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 4.8e-42 176.0 125 71.2
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 1.1e-41 174.9 238 39.9
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.8e-41 174.1 241 40.2
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 1.8e-36 157.5 97 74.2
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 1.8e-36 157.5 97 74.2
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.1e-33 148.3 124 58.1
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 4.2e-30 136.3 105 65.7
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 2.7e-29 133.7 156 51.3
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 5.7e-27 125.9 153 49.0
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 5.7e-27 125.9 153 49.0
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 5.0e-23 112.8 97 58.8
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 6.1e-21 105.9 59 79.7
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 4.8e-18 96.3 56 78.6
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.7e-15 87.8 50 80.0
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 2.2e-15 87.4 114 48.2
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 3.8e-15 86.7 114 48.2
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 1.1e-14 85.1 112 48.2
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 2.3e-12 77.4 149 37.6
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 2.8e-10 70.5 109 40.4
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 2.4e-09 67.4 36 91.7
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 2.0e-08 64.3 48 60.4
arahy.Tifrunner.gnm1.ann1.EBVM73 Arachis hypogaea HOM05D005997 ORTHO05D004267 1.4e-06 58.2 28 92.9
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 3.2e-06 57.0 35 74.3


User provided reference genes

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