Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 2.9e-99 365.5 231 100.0
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.1e-98 363.6 231 99.1
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 2.3e-51 206.5 199 77.4
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 7.3e-50 201.4 200 76.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.2e-47 194.1 208 73.6
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 4.7e-41 172.2 199 69.3
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 5.3e-40 168.7 199 69.3
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 1.2e-39 167.5 193 71.5
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 1.3e-38 164.1 200 67.0
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.4e-37 160.6 202 69.8
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.9e-37 160.2 189 70.4
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 9.3e-37 157.9 160 80.0
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 1.6e-36 157.1 189 69.8
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 2.1e-36 156.8 204 66.2
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 7.8e-36 154.8 200 67.0
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.3e-35 154.1 205 66.8
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.7e-35 153.7 206 66.0
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 2.3e-35 153.3 166 75.3
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 3.0e-35 152.9 161 80.1
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 3.0e-35 152.9 199 65.8
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 5.1e-35 152.1 161 78.9
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 8.7e-35 151.4 205 66.3
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 3.3e-34 149.4 199 67.3
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 3.6e-33 146.0 197 67.0
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 3.6e-33 146.0 199 66.8
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 3.6e-33 146.0 160 76.9
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 4.0e-32 142.5 200 67.5
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 4.0e-32 142.5 195 66.2
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 5.3e-32 142.1 169 74.0
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 6.9e-32 141.7 193 66.8
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 6.9e-32 141.7 171 70.8
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 1.2e-31 141.0 196 64.8
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 2.0e-31 140.2 167 68.3
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 9.9e-31 137.9 196 65.3
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 1.3e-30 137.5 194 64.4
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.7e-30 137.1 167 69.5
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 4.9e-30 135.6 183 68.9
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 4.9e-30 135.6 163 66.9
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 6.4e-30 135.2 165 67.9
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 8.4e-30 134.8 199 62.3
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 3.2e-29 132.9 200 65.0
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 4.2e-29 132.5 163 67.5
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 5.4e-29 132.1 166 71.7
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 9.3e-29 131.3 167 70.1
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 3.5e-28 129.4 193 61.1
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 6.0e-28 128.6 165 70.3
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 7.9e-28 128.3 197 63.5
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.8e-27 127.1 167 65.9
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 3.9e-27 125.9 193 60.6
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 5.1e-27 125.6 165 66.7
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 6.7e-27 125.2 165 64.8
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 5.6e-26 122.1 196 58.7
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 9.6e-26 121.3 160 68.1
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.6e-25 120.6 163 70.6
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 3.7e-25 119.4 162 69.1
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 3.7e-25 119.4 140 72.1
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 4.8e-25 119.0 198 60.1
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 4.8e-25 119.0 205 61.0
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 2.4e-24 116.7 198 60.6
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 2.4e-24 116.7 144 75.0
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 4.0e-24 115.9 140 76.4
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 6.9e-24 115.2 164 67.1
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 6.9e-24 115.2 164 67.1
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 9.0e-24 114.8 164 67.1
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 2.0e-23 113.6 164 66.5
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 2.0e-23 113.6 164 66.5
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 3.4e-23 112.8 216 56.9
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 7.6e-23 111.7 155 65.2
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 7.6e-23 111.7 168 66.7
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 7.6e-23 111.7 168 63.7
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 1.3e-22 110.9 164 65.2
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 2.2e-22 110.2 165 64.2
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 2.9e-22 109.8 169 65.1
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 3.8e-22 109.4 163 63.8
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 3.2e-21 106.3 161 65.8
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 2.1e-20 103.6 163 60.7
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 2.7e-20 103.2 168 62.5
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 2.7e-20 103.2 168 63.7
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 3.5e-20 102.8 164 62.8
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 6.0e-20 102.1 164 64.6
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.0e-19 101.3 154 64.9
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 1.0e-19 101.3 146 66.4
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.3e-19 100.9 168 60.1
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 3.0e-19 99.8 190 55.8
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 3.0e-19 99.8 166 62.0
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 5.1e-19 99.0 159 64.8
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 6.7e-19 98.6 193 54.4
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 1.1e-18 97.8 164 64.0
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 1.5e-18 97.4 164 62.2
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 1.9e-18 97.1 140 68.6
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 4.3e-18 95.9 142 70.4
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 7.4e-18 95.1 168 62.5
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 9.6e-18 94.7 193 57.5
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 9.6e-18 94.7 143 69.2
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 1.3e-17 94.4 165 60.6
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.6e-17 94.0 130 73.8
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 8.2e-17 91.7 165 60.0
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 8.2e-17 91.7 149 65.8
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.1e-16 91.3 117 76.9
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 1.1e-16 91.3 67 73.1
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.4e-16 90.9 126 72.2
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 2.4e-16 90.1 168 58.3
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 5.3e-16 89.0 164 59.8
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 1.3e-14 84.3 67 65.7
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 6.5e-14 82.0 145 40.7
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.1e-13 81.3 145 61.4
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 2.5e-13 80.1 197 49.2
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 9.0e-08 61.6 118 66.1
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 8.5e-06 55.1 54 55.6


User provided reference genes

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