Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MYS8SE Arachis hypogaea HOM05D001516 ORTHO05D001357 5.9e-121 437.6 226 100.0
arahy.Tifrunner.gnm1.ann1.G1MIMQ Arachis hypogaea HOM05D001516 ORTHO05D001357 9.0e-45 184.5 103 89.3
arahy.Tifrunner.gnm1.ann1.JXS3UT Arachis hypogaea HOM05D001516 ORTHO05D001357 3.4e-44 182.6 103 88.3
Lalb_Chr16g0391621 Lupinus albus HOM05D001516 ORTHO05D001357 8.8e-32 141.4 100 70.0
Glyma.01G159200 Glycine max HOM05D001516 ORTHO05D001357 2.3e-24 116.7 103 56.3
Glyma.11G085500 Glycine max HOM05D001516 ORTHO05D001357 7.5e-23 111.7 100 57.0
Phvul.002G116000 Phaseolus vulgaris HOM05D001516 ORTHO05D001357 2.2e-22 110.2 107 53.3
Medtr5g024070 Medicago truncatula HOM05D001516 ORTHO05D001357 1.4e-21 107.5 98 53.1
VMungo1215G1384 Vigna mungo HOM05D001516 ORTHO05D001357 7.0e-21 105.1 101 52.5
Lalb_Chr09g0321211 Lupinus albus HOM05D001516 ORTHO05D001357 9.1e-21 104.8 102 55.9
RcHm_v2.0_Chr2g0097321 Rosa chinensis HOM05D001516 ORTHO05D001357 1.6e-20 104.0 98 52.0
FvH4_1g10460 Fragaria vesca HOM05D001516 ORTHO05D001357 3.5e-20 102.8 98 52.0
FAN19G0893 Fragaria x ananassa HOM05D001516 ORTHO05D001357 5.9e-20 102.1 98 52.0
Psat2g149160 Pisum sativum HOM05D001516 ORTHO05D001357 1.0e-19 101.3 99 49.5
QL06p052912 Quercus lobata HOM05D001516 ORTHO05D001357 1.0e-19 101.3 98 53.1
TPR.G8368 Trifolium pratense HOM05D001516 ORTHO05D001357 2.2e-19 100.1 103 52.4
FAN26G0778 Fragaria x ananassa HOM05D001516 ORTHO05D001357 5.0e-19 99.0 98 50.0
FAN23G2806 Fragaria x ananassa HOM05D001516 ORTHO05D001357 6.5e-19 98.6 98 51.0
FAN28G1915 Fragaria x ananassa HOM05D001516 ORTHO05D001357 8.5e-19 98.2 98 52.0
CiPaw.07G003300 Carya illinoinensis HOM05D001516 ORTHO05D001357 4.2e-18 95.9 98 51.0
Lj2g0007675 Lotus japonicus HOM05D001516 ORTHO05D001357 9.4e-18 94.7 104 50.0
Manes.02G113900 Manihot esculenta HOM05D001516 ORTHO05D001357 1.4e-16 90.9 98 48.0
MD15G1232500 Malus domestica HOM05D001516 ORTHO05D001357 1.8e-16 90.5 99 45.5
MD02G1117800 Malus domestica HOM05D001516 ORTHO05D001357 4.0e-16 89.4 99 45.5
Prupe.7G181600 Prunus persica HOM05D001516 ORTHO05D001357 4.0e-16 89.4 99 46.5
arahy.Tifrunner.gnm1.ann1.F3ZCPW Arachis hypogaea HOM05D001516 ORTHO05D001357 5.2e-16 89.0 92 51.1
arahy.Tifrunner.gnm1.ann1.ZR07MJ Arachis hypogaea HOM05D001516 ORTHO05D001357 5.2e-16 89.0 92 51.1
Gorai.003G002500 Gossypium raimondii HOM05D001516 ORTHO05D001357 3.4e-15 86.3 98 44.9
Gohir.D03G002200 Gossypium hirsutum HOM05D001516 ORTHO05D001357 4.4e-15 85.9 98 44.9
Cfa007075 Carpinus fangiana HOM05D001516 ORTHO05D001357 7.5e-15 85.1 85 52.9
Gohir.A02G177600 Gossypium hirsutum HOM05D001516 ORTHO05D001357 7.5e-15 85.1 98 44.9
Potri.005G101000 Populus trichocarpa HOM05D001516 ORTHO05D001357 1.7e-14 84.0 98 45.9
CANSAT25G2192 Cannabis sativa HOM05D001516 ORTHO05D001357 2.8e-14 83.2 103 43.7
Cpa.g.sc6.346 Carica papaya HOM05D001516 ORTHO05D001357 2.4e-13 80.1 98 41.8
Sabra05G0083500 Salix brachista HOM05D001516 ORTHO05D001357 7.7e-12 75.1 121 38.0
Atru.chr4.1891 Acer truncatum HOM05D001516 ORTHO05D001357 1.0e-11 74.7 100 40.0
Aqoxy6G01631 Aquilegia oxysepala HOM05D001516 ORTHO05D001357 1.0e-11 74.7 105 41.0
Dinv08169 Davidia involucrata HOM05D001516 ORTHO05D001357 7.2e-10 68.6 100 39.0
ATR0807G179 Amborella trichopoda HOM05D001516 ORTHO05D001357 9.4e-10 68.2 109 39.4
Dinv40181 Davidia involucrata HOM05D001516 ORTHO05D001357 2.7e-09 66.6 102 37.3
Cc07_g11770 Coffea canephora HOM05D001516 ORTHO05D001357 4.7e-09 65.9 100 34.0
CSS0004018 Camellia sinensis var. sinensis HOM05D001516 ORTHO05D001357 1.4e-08 64.3 100 36.0
CSS0038680 Camellia sinensis var. sinensis HOM05D001516 ORTHO05D001357 1.4e-08 64.3 100 36.0
Lj2A499G36 Lonicera japonica HOM05D001516 ORTHO05D001357 1.5e-07 60.8 97 34.0
COL.COLO4_13416 Corchorus olitorius HOM05D001516 ORTHO05D001357 9.8e-07 58.2 56 48.2
Actinidia28746 Actinidia chinensis HOM05D002491 ORTHO05D002651 2.2e-06 57.0 161 29.2
Lj4A234T62 Lonicera japonica HOM05D001516 ORTHO05D001357 2.2e-06 57.0 104 31.7
Ciclev10027531m.g Citrus clementina HOM05D001516 ORTHO05D001357 6.3e-06 55.5 72 44.4
vmacro18462 Vaccinium macrocarpon HOM05D001516 ORTHO05D001357 6.3e-06 55.5 97 28.9
HanXRQChr09g0258161 Helianthus annuus HOM05D001516 ORTHO05D001357 8.3e-06 55.1 106 34.0


User provided reference genes

Program Settings