Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 7.2e-44 180.3 96 100.0
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.0e-38 162.2 100 90.0
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 2.7e-38 161.8 103 90.3
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 7.8e-38 160.2 100 90.0
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 8.1e-19 97.1 88 62.5
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 5.8e-17 90.9 99 58.6
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 1.7e-16 89.4 88 61.4
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 1.9e-15 85.9 87 60.9
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 3.5e-14 81.6 98 57.1
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 8.6e-13 77.0 100 54.0
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 1.6e-11 72.8 88 55.7
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 2.8e-11 72.0 93 48.4
Lj2g0016909 Lotus japonicus HOM05D007691 ORTHO05D008758 3.6e-11 71.6 94 54.3
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 4.7e-11 71.2 97 49.5
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 6.2e-11 70.9 91 47.3
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 1.4e-10 69.7 97 50.5
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 4.0e-10 68.2 89 48.3
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 6.8e-10 67.4 97 47.4
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 1.2e-09 66.6 91 49.5
Cfa017725 Carpinus fangiana HOM05D007691 ORTHO05D008758 1.5e-09 66.2 94 44.7
Lalb_Chr22g0358551 Lupinus albus HOM05D007691 ORTHO05D008758 2.0e-09 65.9 45 75.6
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 2.6e-09 65.5 99 46.5
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 7.6e-09 63.9 99 47.5
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 1.3e-08 63.2 91 46.2
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 1.3e-08 63.2 91 46.2
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 2.9e-08 62.0 97 45.4
TPR.G34787 Trifolium pratense HOM05D007691 ORTHO05D008758 3.8e-08 61.6 89 48.3
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 4.9e-08 61.2 100 45.0
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 4.9e-08 61.2 100 45.0
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 8.4e-08 60.5 99 44.4
Haze_20399 Corylus avellana HOM05D007691 ORTHO05D008758 8.4e-08 60.5 92 41.3
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 8.4e-08 60.5 91 41.8
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 1.1e-07 60.1 99 48.5
MD14G1010100 Malus domestica HOM05D007691 ORTHO05D008758 1.4e-07 59.7 99 45.5
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 1.9e-07 59.3 91 41.8
Glyma.19G117800 Glycine max HOM05D007691 ORTHO05D008758 2.4e-07 58.9 105 41.9
Lalb_Chr02g0157451 Lupinus albus HOM05D007691 ORTHO05D008758 3.2e-07 58.5 87 43.7
Lalb_Chr24g0401091 Lupinus albus HOM05D007691 ORTHO05D008758 3.2e-07 58.5 96 39.6
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 5.4e-07 57.8 88 46.6
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 5.4e-07 57.8 99 44.4
Lalb_Chr02g0157431 Lupinus albus HOM05D007691 ORTHO05D008758 7.1e-07 57.4 87 44.8
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 9.3e-07 57.0 95 46.3
Glyma.16G035200 Glycine max HOM05D007691 ORTHO05D008758 9.3e-07 57.0 89 41.6
vmacro07648 Vaccinium macrocarpon HOM05D007691 ORTHO05D008758 1.2e-06 56.6 90 45.6
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 1.6e-06 56.2 89 43.8
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 1.6e-06 56.2 92 45.7
TPR.G32543 Trifolium pratense HOM05D007691 ORTHO05D008758 2.1e-06 55.8 91 40.7
CANSAT78G2271 Cannabis sativa HOM05D007691 ORTHO05D008758 2.7e-06 55.5 103 46.6
PGR142G1160 Punica granatum HOM05D007691 ORTHO05D008758 2.7e-06 55.5 93 47.3
Sed0014810 Sechium edule HOM05D007691 ORTHO05D008758 2.7e-06 55.5 97 44.3
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 2.7e-06 55.5 92 41.3
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 3.5e-06 55.1 72 48.6
Medtr7g086770 Medicago truncatula HOM05D007691 ORTHO05D008758 3.5e-06 55.1 89 44.9
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 4.6e-06 54.7 88 43.2
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 4.6e-06 54.7 92 44.6
Psat1g089160 Pisum sativum HOM05D007691 ORTHO05D008758 4.6e-06 54.7 88 40.9
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 6.0e-06 54.3 43 55.8
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 7.8e-06 53.9 100 45.0
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 7.8e-06 53.9 93 49.5


User provided reference genes

Program Settings