Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MU3CLC Arachis hypogaea HOM05D000876 ORTHO05D000285 1.0e-27 125.9 61 100.0
arahy.Tifrunner.gnm1.ann1.4ILM2X Arachis hypogaea HOM05D000876 ORTHO05D000285 7.9e-20 99.8 68 77.9
arahy.Tifrunner.gnm1.ann1.DD1W6J Arachis hypogaea HOM05D000876 ORTHO05D000285 2.8e-17 91.3 65 72.3
arahy.Tifrunner.gnm1.ann1.RF7S57 Arachis hypogaea HOM05D000876 ORTHO05D000285 4.5e-15 84.0 68 72.1
arahy.Tifrunner.gnm1.ann1.XB306U Arachis hypogaea HOM05D000876 ORTHO05D000285 7.4e-10 66.6 43 72.1
Medtr1g080080 Medicago truncatula HOM05D000876 ORTHO05D000285 7.4e-10 66.6 68 50.0
Medtr2g018710 Medicago truncatula HOM05D000876 ORTHO05D000285 7.4e-10 66.6 68 50.0
Medtr2g086350 Medicago truncatula HOM05D000876 ORTHO05D000285 7.4e-10 66.6 68 50.0
Medtr5g054570 Medicago truncatula HOM05D000876 ORTHO05D000285 1.3e-09 65.9 61 50.8
Medtr2g435870 Medicago truncatula HOM05D000876 ORTHO05D000285 3.7e-09 64.3 61 54.1
TPR.G33899 Trifolium pratense HOM05D000876 ORTHO05D000285 3.7e-09 64.3 68 51.5
Medtr7g034425 Medicago truncatula HOM05D000876 ORTHO05D000285 8.2e-09 63.2 61 54.1
arahy.Tifrunner.gnm1.ann1.SF7PFS Arachis hypogaea HOM05D000876 ORTHO05D000285 1.8e-08 62.0 37 83.8
TWI75G0526 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.8e-08 62.0 58 48.3
TWI81G0918 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.8e-08 62.0 58 48.3
TPR.G25769 Trifolium pratense HOM05D000876 ORTHO05D000285 3.1e-08 61.2 58 50.0
arahy.Tifrunner.gnm1.ann1.6409NJ Arachis hypogaea HOM05D000876 ORTHO05D000285 4.1e-08 60.8 67 58.2
arahy.Tifrunner.gnm1.ann1.KMV29V Arachis hypogaea HOM05D000876 ORTHO05D000285 4.1e-08 60.8 67 58.2
TWI36G1398 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.1e-08 60.8 58 48.3
TWI75G0795 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.1e-08 60.8 58 48.3
Medtr3g110155 Medicago truncatula HOM05D000876 ORTHO05D000285 1.2e-07 59.3 61 49.2
Medtr8g006585 Medicago truncatula HOM05D000876 ORTHO05D000285 1.2e-07 59.3 61 49.2
Medtr8g006695 Medicago truncatula HOM05D000876 ORTHO05D000285 1.2e-07 59.3 61 49.2
TWI81G1072 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.0e-07 58.5 62 50.0
TPR.G22361 Trifolium pratense HOM05D000876 ORTHO05D000285 3.4e-07 57.8 69 49.3
TPR.G30704 Trifolium pratense HOM05D000876 ORTHO05D000285 3.4e-07 57.8 68 47.1
Solyc12g039050.3 Solanum lycopersicum HOM05D000876 ORTHO05D000285 5.9e-07 57.0 60 46.7
Lj5g0006232 Lotus japonicus HOM05D000876 ORTHO05D000285 1.0e-06 56.2 60 41.7
TWI53G1733 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.3e-06 55.8 64 46.9
TWI23G0996 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.7e-06 55.5 62 48.4
TWI31G1090 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.7e-06 55.5 62 48.4
TWI34G1578 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.7e-06 55.5 62 48.4
TWI63G0199 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.7e-06 55.5 58 46.6
TWI75G1494 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.7e-06 55.5 62 48.4
Medtr5g055390 Medicago truncatula HOM05D000876 ORTHO05D000285 2.2e-06 55.1 67 40.3
Rhsim06G0024000 Rhododendron simsii HOM05D000876 ORTHO05D000285 2.2e-06 55.1 56 48.2
Rhsim10G0146900 Rhododendron simsii HOM05D000876 ORTHO05D000285 2.2e-06 55.1 56 48.2
Gorai.004G036300 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.9e-06 54.7 60 46.7
Gorai.008G032400 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.9e-06 54.7 60 46.7
TWI34G1784 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.9e-06 54.7 62 48.4
TWI38G0708 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.9e-06 54.7 62 48.4
TWI38G1661 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.9e-06 54.7 62 48.4
TWI56G0680 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.9e-06 54.7 58 46.6
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 3.8e-06 54.3 44 52.3
Lj1g0012065 Lotus japonicus HOM05D000876 ORTHO05D000285 3.8e-06 54.3 68 44.1
Medtr1g016370 Medicago truncatula HOM05D000876 ORTHO05D000285 3.8e-06 54.3 67 41.8
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 3.8e-06 54.3 67 41.8
Medtr8g054100 Medicago truncatula HOM05D000876 ORTHO05D000285 3.8e-06 54.3 67 41.8
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 5.0e-06 53.9 42 57.1
Rhsim05G0157800 Rhododendron simsii HOM05D000876 ORTHO05D000285 5.0e-06 53.9 56 46.4
Rhsim06G0093500 Rhododendron simsii HOM05D000876 ORTHO05D000285 5.0e-06 53.9 56 46.4
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 6.5e-06 53.5 57 45.6
Glyma.18G191100 Glycine max HOM05D000876 ORTHO05D000285 6.5e-06 53.5 60 41.7
TWI12G1481 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.5e-06 53.5 62 48.4
TWI39G0385 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.5e-06 53.5 58 44.8
Glyma.01G052000 Glycine max HOM05D000876 ORTHO05D000285 8.5e-06 53.1 67 43.3


User provided reference genes

Program Settings