Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MTT5DF Arachis hypogaea HOM05D003430 ORTHO05D014065 3.9e-57 224.6 113 100.0
arahy.Tifrunner.gnm1.ann1.B82PT4 Arachis hypogaea HOM05D003430 ORTHO05D014065 2.4e-38 162.2 114 76.3
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 5.0e-36 154.5 106 76.4
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 3.2e-35 151.8 108 75.9
BraSC48t46246Z Brassica rapa HOM05D003430 ORTHO05D014065 3.2e-35 151.8 108 75.9
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 8.0e-34 147.1 109 75.2
arahy.Tifrunner.gnm1.ann1.J6HUIG Arachis hypogaea HOM05D003430 ORTHO05D026951 1.0e-33 146.7 98 78.6
C01p34970 Brassica napus HOM05D003430 ORTHO05D014065 2.2e-31 139.0 108 71.3
BolC1t03463H Brassica oleracea HOM05D003430 ORTHO05D014065 2.2e-31 139.0 108 71.3
SHI31750 Sapria himalayana HOM05D003430 ORTHO05D014065 1.5e-24 116.3 94 70.2
COL.COLO4_04428 Corchorus olitorius HOM05D003430 ORTHO05D004809 2.2e-23 112.5 78 74.4
arahy.Tifrunner.gnm1.ann1.U8L35G Arachis hypogaea HOM05D003430 ORTHO05D014065 2.0e-21 105.9 107 61.7
COL.COLO4_04429 Corchorus olitorius HOM05D003430 ORTHO05D004809 1.7e-20 102.8 74 71.6
Hma1.2p1_0040F.1_g025060 Hydrangea macrophylla HOM05D003430 ORTHO05D014065 9.5e-19 97.1 87 66.7
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 3.6e-18 95.1 82 67.1
SabraMtG0000400 Salix brachista HOM05D003430 ORTHO05D004809 1.3e-15 86.7 65 70.8
BraSC77t46629Z Brassica rapa HOM05D003430 ORTHO05D014065 4.9e-15 84.7 75 65.3
Sabra12G0092700 Salix brachista HOM05D003430 ORTHO05D004809 1.4e-14 83.2 101 50.5
arahy.Tifrunner.gnm1.ann1.FZ2FI3 Arachis hypogaea HOM05D003430 ORTHO05D014065 3.0e-12 75.5 38 100.0
arahy.Tifrunner.gnm1.ann1.MDP5TU Arachis hypogaea HOM05D003430 ORTHO05D014065 3.0e-12 75.5 38 100.0
arahy.Tifrunner.gnm1.ann1.SLB19S Arachis hypogaea HOM05D003430 ORTHO05D014065 3.0e-12 75.5 38 100.0
BraSC54t46374Z Brassica rapa HOM05D003430 ORTHO05D014065 6.6e-12 74.3 68 64.7
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 8.6e-12 73.9 98 50.0
Sc11g0004430 Simmondsia chinensis HOM05D003430 ORTHO05D014065 9.5e-11 70.5 36 97.2
Dinv06858 Davidia involucrata HOM05D003430 ORTHO05D014065 3.6e-10 68.6 35 97.1
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 4.7e-10 68.2 38 89.5
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 1.4e-09 66.6 52 69.2
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 1.4e-09 66.6 52 69.2
BraSC177t45749Z Brassica rapa HOM05D003430 ORTHO05D026951 2.2e-07 59.3 30 93.3
arahy.Tifrunner.gnm1.ann1.N4Y7JX Arachis hypogaea HOM05D003430 ORTHO05D026951 1.1e-06 57.0 26 100.0
arahy.Tifrunner.gnm1.ann1.XP9ZJX Arachis hypogaea HOM05D003430 ORTHO05D026951 1.1e-06 57.0 26 100.0


User provided reference genes

Program Settings