Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 2.6e-57 225.7 168 100.0
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 2.5e-52 209.1 167 97.0
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.9e-31 139.8 167 59.3
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.5e-31 139.4 167 59.3
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 4.2e-23 112.1 180 42.8
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 3.0e-21 105.9 181 41.4
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 3.7e-19 99.0 184 39.7
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 6.3e-19 98.2 150 57.3
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 1.8e-18 96.7 181 42.5
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 7.0e-18 94.7 179 40.8
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 9.2e-18 94.4 170 47.6
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 1.0e-16 90.9 182 37.4
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.7e-16 90.1 150 46.0
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 2.9e-16 89.4 147 43.5
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 8.6e-16 87.8 149 47.7
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 2.5e-15 86.3 145 45.5
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 3.3e-15 85.9 171 37.4
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 7.3e-15 84.7 144 43.1
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 9.5e-15 84.3 146 49.3
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 9.5e-15 84.3 188 41.0
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 1.6e-14 83.6 141 43.3
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 2.8e-14 82.8 149 40.3
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 2.8e-14 82.8 147 36.7
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 2.8e-14 82.8 179 35.2
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 2.8e-14 82.8 145 37.9
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 2.8e-14 82.8 170 38.2
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 3.6e-14 82.4 148 42.6
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 4.7e-14 82.0 146 53.4
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 6.1e-14 81.6 146 37.7
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 8.0e-14 81.3 144 40.3
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 8.0e-14 81.3 144 44.4
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 8.0e-14 81.3 172 38.4
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 1.4e-13 80.5 164 43.3
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.4e-13 80.5 166 45.8
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.3e-13 79.7 170 38.2
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 2.3e-13 79.7 144 38.2
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 2.3e-13 79.7 141 39.0
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 4.0e-13 79.0 144 39.6
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 6.8e-13 78.2 169 37.3
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 6.8e-13 78.2 169 37.3
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 8.9e-13 77.8 143 36.4
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 2.0e-12 76.6 143 35.7
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 2.0e-12 76.6 144 50.7
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 2.6e-12 76.3 143 35.0
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 3.4e-12 75.9 177 33.9
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 4.4e-12 75.5 146 37.7
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 4.4e-12 75.5 169 39.1
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 5.7e-12 75.1 143 39.2
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 5.7e-12 75.1 145 35.2
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 5.7e-12 75.1 146 47.9
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 5.7e-12 75.1 145 35.2
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 5.7e-12 75.1 146 47.9
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 5.7e-12 75.1 148 35.1
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 5.7e-12 75.1 172 33.7
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 5.7e-12 75.1 145 36.6
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 5.7e-12 75.1 135 38.5
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 7.5e-12 74.7 146 40.4
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 7.5e-12 74.7 150 43.3
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 9.8e-12 74.3 146 36.3
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 9.8e-12 74.3 145 42.8
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 1.7e-11 73.6 166 33.1
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 1.7e-11 73.6 177 33.3
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.2e-11 73.2 158 38.6
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 2.2e-11 73.2 170 37.1
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 2.9e-11 72.8 145 42.8
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 2.9e-11 72.8 146 54.1
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 3.7e-11 72.4 181 33.7
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 3.7e-11 72.4 156 35.3
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 4.9e-11 72.0 146 44.5
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 4.9e-11 72.0 146 42.5
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 6.4e-11 71.6 146 34.9
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 6.4e-11 71.6 144 33.3
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 6.4e-11 71.6 150 36.0
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 6.4e-11 71.6 166 38.6
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.1e-10 70.9 181 35.4
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.1e-10 70.9 137 38.7
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.4e-10 70.5 143 37.8
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 1.8e-10 70.1 177 42.9
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 1.8e-10 70.1 154 37.7
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 1.8e-10 70.1 191 36.6
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 2.4e-10 69.7 146 45.2
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 3.2e-10 69.3 146 46.6
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 3.2e-10 69.3 139 36.0
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 4.1e-10 68.9 164 54.3
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 4.1e-10 68.9 171 40.4
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 5.4e-10 68.6 144 43.1
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 7.0e-10 68.2 145 39.3
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 7.0e-10 68.2 139 34.5
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 9.2e-10 67.8 146 46.6
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 2.0e-09 66.6 166 41.6
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 3.5e-09 65.9 184 31.0
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 4.6e-09 65.5 176 37.5
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 7.8e-09 64.7 183 36.1
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 1.0e-08 64.3 167 41.3
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 1.0e-08 64.3 216 29.2
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 1.0e-08 64.3 142 36.6
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 1.0e-08 64.3 202 33.2
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 2.3e-08 63.2 177 31.1
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 3.9e-08 62.4 130 42.3
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 5.0e-08 62.0 150 42.7
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 2.5e-07 59.7 157 34.4
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.8e-06 56.2 39 66.7
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 4.7e-06 55.5 165 33.9
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 4.7e-06 55.5 141 46.1
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 4.7e-06 55.5 174 32.2
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 8.0e-06 54.7 39 61.5
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 8.0e-06 54.7 53 56.6
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 8.0e-06 54.7 124 33.1


User provided reference genes

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