Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 9.6e-68 260.0 128 100.0
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.5e-41 172.9 157 63.1
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.8e-34 149.4 172 50.6
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 7.9e-30 134.0 136 58.1
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 8.8e-29 130.6 164 54.3
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.7e-27 126.3 183 44.8
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 9.1e-26 120.6 194 43.8
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.5e-25 119.8 68 77.9
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 6.5e-24 114.4 146 51.4
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.9e-23 112.8 164 50.6
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 5.5e-23 111.3 147 51.7
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 2.7e-22 109.0 170 42.9
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 6.1e-22 107.8 54 83.3
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 8.0e-22 107.5 155 50.3
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.0e-21 107.1 175 45.1
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.0e-21 107.1 151 47.0
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 1.4e-21 106.7 163 46.0
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.8e-21 106.3 168 45.8
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 8.8e-21 104.0 167 44.3
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.1e-20 103.6 145 49.7
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.1e-20 103.6 149 45.6
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.5e-20 103.2 150 46.7
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 4.4e-20 101.7 145 44.1
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 7.4e-20 100.9 167 43.1
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 9.7e-20 100.5 147 46.9
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 1.3e-19 100.1 151 45.7
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.7e-19 99.8 108 53.7
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 2.2e-19 99.4 149 44.3
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.8e-19 99.0 161 42.2
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 2.8e-19 99.0 161 44.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 3.7e-19 98.6 166 44.0
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 4.8e-19 98.2 144 45.8
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 4.8e-19 98.2 158 43.7
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 6.3e-19 97.8 150 44.0
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 6.3e-19 97.8 170 45.3
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.1e-18 97.1 149 46.3
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.4e-18 96.7 151 45.0
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 1.8e-18 96.3 148 43.2
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 1.8e-18 96.3 147 44.2
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.4e-18 95.9 150 44.7
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 3.1e-18 95.5 162 40.7
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 3.1e-18 95.5 161 41.6
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 4.1e-18 95.1 166 41.0
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 4.1e-18 95.1 164 44.5
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 4.1e-18 95.1 148 43.2
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 5.3e-18 94.7 121 50.4
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 5.3e-18 94.7 148 44.6
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 7.0e-18 94.4 156 41.7
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 7.0e-18 94.4 149 42.3
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 7.0e-18 94.4 152 42.1
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 1.2e-17 93.6 155 40.0
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 2.6e-17 92.4 168 42.3
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.5e-17 92.0 142 44.4
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 3.5e-17 92.0 172 40.1
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 3.5e-17 92.0 148 42.6
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.5e-17 91.7 148 42.6
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 4.5e-17 91.7 115 47.8
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 5.9e-17 91.3 111 46.8
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.0e-16 90.5 156 39.7
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.3e-16 90.1 149 41.6
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.7e-16 89.7 152 46.1
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.7e-16 89.7 151 41.7
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 1.7e-16 89.7 159 40.9
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.7e-16 89.7 111 47.7
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 2.2e-16 89.4 163 39.9
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 2.2e-16 89.4 142 43.7
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.9e-16 89.0 164 39.6
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 3.8e-16 88.6 138 43.5
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 3.8e-16 88.6 154 39.6
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 6.5e-16 87.8 143 40.6
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 6.5e-16 87.8 143 42.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 6.5e-16 87.8 105 49.5
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 8.5e-16 87.4 151 40.4
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 8.5e-16 87.4 159 44.0
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.1e-15 87.0 158 38.0
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.1e-15 87.0 114 44.7
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.5e-15 86.7 163 42.3
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.5e-15 85.9 129 43.4
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.2e-15 85.1 146 42.5
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 5.5e-15 84.7 163 39.9
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 7.2e-15 84.3 111 45.9
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.2e-14 83.6 151 40.4
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 1.2e-14 83.6 141 43.3
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.6e-14 82.0 111 42.3
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 6.1e-14 81.3 111 40.5
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.4e-13 80.1 111 41.4
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 3.0e-13 79.0 146 41.8
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 4.0e-13 78.6 155 35.5
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 5.2e-13 78.2 136 38.2
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 5.2e-13 78.2 152 36.2
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 5.2e-13 78.2 152 36.2
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 6.8e-13 77.8 144 37.5
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 6.8e-13 77.8 136 38.2
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 6.8e-13 77.8 140 44.3
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 8.8e-13 77.4 136 38.2
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 8.8e-13 77.4 128 39.1
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.2e-12 77.0 136 38.2
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 3.4e-12 75.5 105 43.8
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 2.2e-11 72.8 145 38.6
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 2.4e-10 69.3 116 36.2
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 1.9e-07 59.7 110 32.7
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 2.5e-07 59.3 135 34.1


User provided reference genes

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