Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 1.8e-252 875.5 475 100.0
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 1.3e-231 806.2 459 95.9
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 9.6e-230 800.0 459 95.4
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.0e-223 780.0 459 93.5
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 2.3e-223 778.9 470 91.7
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 4.6e-192 674.9 459 83.0
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 9.2e-132 474.6 459 58.4
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 6.0e-131 471.9 459 61.4
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 2.1e-128 463.4 459 56.2
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 3.0e-122 443.0 459 57.3
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 1.9e-121 440.3 462 59.3
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 3.6e-120 436.0 459 56.2
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 4.4e-118 429.1 466 52.4
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 5.8e-118 428.7 468 52.4
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 5.8e-118 428.7 468 52.4
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.2e-115 421.0 459 52.1
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 1.1e-111 407.9 474 49.8
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 1.8e-111 407.1 432 53.2
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 2.6e-110 403.3 432 53.0
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 2.4e-108 396.7 455 49.5
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 3.2e-108 396.4 462 48.7
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 5.4e-108 395.6 455 49.7
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 2.7e-107 393.3 461 49.2
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 9.6e-105 384.8 463 48.6
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 3.6e-104 382.9 471 47.8
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 9.0e-103 378.3 455 50.1
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 4.5e-102 375.9 456 49.1
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.3e-101 374.4 457 46.8
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 1.7e-101 374.0 460 44.8
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 4.9e-101 372.5 453 45.5
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 8.4e-101 371.7 459 49.7
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 2.1e-99 367.1 462 46.3
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 6.0e-99 365.5 451 46.1
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.3e-98 363.6 458 49.3
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.3e-97 359.4 458 49.1
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 9.6e-97 358.2 458 48.7
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 9.6e-97 358.2 440 48.4
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.6e-96 357.5 460 44.6
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.1e-96 357.1 458 48.7
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 3.1e-95 353.2 440 50.2
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 4.0e-95 352.8 434 44.2
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 2.0e-94 350.5 455 42.6
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 4.5e-94 349.4 456 45.2
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 5.8e-94 349.0 453 47.0
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.7e-93 347.4 425 44.2
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 2.9e-93 346.7 462 44.8
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.1e-92 344.7 398 46.2
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 7.1e-92 342.0 428 45.8
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 9.3e-92 341.7 403 45.2
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 1.2e-91 341.3 457 44.0
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.3e-90 337.0 429 43.4
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 3.0e-90 336.7 457 43.8
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.1e-90 335.9 458 44.1
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 8.7e-90 335.1 429 43.4
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 8.7e-90 335.1 439 42.8
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 2.1e-88 330.5 430 44.9
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 2.1e-88 330.5 460 47.0
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.1e-87 328.2 457 47.3
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.4e-87 327.8 444 44.4
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 1.4e-87 327.8 462 47.4
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 1.8e-87 327.4 427 43.8
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 1.8e-87 327.4 456 44.1
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 3.1e-87 326.6 509 41.3
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 3.1e-87 326.6 456 40.8
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 4.0e-87 326.2 426 42.7
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.3e-87 325.9 455 45.1
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 6.9e-87 325.5 426 44.4
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 9.0e-87 325.1 471 41.6
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 1.5e-86 324.3 465 41.7
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 1.5e-86 324.3 439 41.7
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.0e-86 323.9 455 44.6
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 5.8e-86 322.4 426 42.3
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.2e-85 320.5 458 44.5
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 6.5e-85 318.9 462 41.6
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 2.5e-84 317.0 462 44.4
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 7.1e-84 315.5 464 41.8
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 4.6e-83 312.8 425 41.6
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 5.1e-82 309.3 465 45.4
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 6.7e-82 308.9 469 39.9
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 1.3e-80 304.7 434 41.7
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 1.3e-80 304.7 462 41.3
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 3.1e-79 300.1 433 41.3
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 9.0e-79 298.5 471 39.7
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.2e-78 298.1 432 42.1
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 4.5e-78 296.2 456 41.0
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 2.9e-77 293.5 439 41.0
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 6.5e-77 292.4 474 40.9
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 1.1e-76 291.6 465 39.4
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 1.4e-76 291.2 465 39.4
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 1.4e-76 291.2 465 39.4
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 1.9e-76 290.8 465 38.9
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 1.9e-76 290.8 435 40.7
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 2.5e-76 290.4 435 40.9
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.5e-76 290.4 437 41.4
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 3.2e-76 290.0 437 40.7
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 3.2e-76 290.0 451 39.5
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 4.2e-76 289.7 465 38.7
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 4.6e-75 286.2 463 39.1
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 1.8e-74 284.3 475 37.5
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 2.3e-74 283.9 434 40.8
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.5e-73 281.2 444 42.3
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 9.7e-73 278.5 461 39.9
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 4.8e-72 276.2 435 39.5
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 8.2e-72 275.4 379 44.1
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 4.1e-71 273.1 459 36.6
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 1.2e-70 271.6 455 37.4
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 4.5e-70 269.6 467 39.0
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 1.1e-68 265.0 461 36.2
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 9.4e-68 261.9 464 36.4
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 3.6e-67 260.0 461 37.5
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 8.8e-66 255.4 460 35.7
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 8.8e-66 255.4 453 37.5
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 2.0e-65 254.2 461 39.9
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 5.7e-65 252.7 461 39.9
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 4.8e-64 249.6 461 39.5
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 1.8e-63 247.7 390 42.3
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 1.2e-62 245.0 461 36.9
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 2.9e-61 240.4 470 34.3
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.1e-60 238.4 491 34.6
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 3.6e-59 233.4 470 34.5
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.0e-58 230.3 276 42.0
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-55 221.5 177 66.7
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 1.4e-55 221.5 461 33.2
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 4.1e-55 219.9 421 33.3
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 7.7e-54 215.7 399 32.1
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 8.5e-53 212.2 237 47.3
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 3.5e-46 190.3 437 35.2
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 4.5e-46 189.9 143 62.9
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.3e-45 188.3 148 61.5
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 3.8e-45 186.8 252 47.6
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 2.3e-42 177.6 472 30.1
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 8.8e-42 175.6 162 53.1
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 5.0e-37 159.8 363 30.6
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.0e-34 152.1 135 54.1
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 4.9e-32 143.3 369 29.5
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.0e-30 137.9 255 39.6
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 8.6e-29 132.5 431 27.1
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 4.3e-28 130.2 449 24.9
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 5.2e-26 123.2 164 43.3
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.6e-25 120.9 143 40.6
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 3.4e-25 120.6 135 41.5
arahy.Tifrunner.gnm1.ann1.7PH810 Arachis hypogaea HOM05D003578 ORTHO05D004021 7.5e-25 119.4 111 66.7
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 3.2e-23 114.0 432 25.5
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.3e-21 108.6 208 36.5
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.0e-21 107.5 130 46.2
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.9e-20 104.8 149 43.0
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 2.5e-20 104.4 139 41.0
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 5.6e-20 103.2 90 63.3
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 1.2e-19 102.1 134 42.5
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.8e-19 100.9 143 35.7
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 6.2e-19 99.8 103 46.6
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 4.0e-18 97.1 454 23.3
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 8.9e-18 95.9 384 23.7
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 4.9e-16 90.1 128 39.1
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 2.4e-15 87.8 76 52.6
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 3.2e-15 87.4 158 40.5
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 3.2e-15 87.4 123 37.4
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 3.0e-13 80.9 446 22.6
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 3.9e-13 80.5 68 57.4
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.5e-12 78.6 91 44.0
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 1.6e-11 75.1 119 38.7
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 4.0e-10 70.5 300 23.0
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 8.9e-10 69.3 121 38.8
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.0e-09 68.2 64 51.6
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.0e-09 68.2 64 51.6
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 2.2e-08 64.7 82 42.7


User provided reference genes

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