Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MNM1D4 Arachis hypogaea HOM05D001097 ORTHO05D082735 4.7e-177 624.4 313 100.0
arahy.Tifrunner.gnm1.ann1.38SNYI Arachis hypogaea HOM05D001097 ORTHO05D001009 8.2e-12 75.5 41 92.7
arahy.Tifrunner.gnm1.ann1.D0UR3R Arachis hypogaea HOM05D001097 ORTHO05D001009 8.2e-12 75.5 41 92.7
Lj3g0013595 Lotus japonicus HOM05D001097 ORTHO05D001009 2.5e-08 63.9 41 73.2
Psat7g149720 Pisum sativum HOM05D001097 ORTHO05D001009 1.2e-07 61.6 41 73.2
TPR.G21654 Trifolium pratense HOM05D001097 ORTHO05D001009 1.6e-07 61.2 41 70.7
VMungo1080G1049 Vigna mungo HOM05D001097 ORTHO05D001009 3.6e-07 60.1 41 68.3
Ca_20708_v3 Cicer arietinum L. HOM05D001097 ORTHO05D001009 6.1e-07 59.3 41 68.3
Lalb_Chr03g0029111 Lupinus albus HOM05D001097 ORTHO05D001009 6.1e-07 59.3 41 73.2
Medtr4g045973 Medicago truncatula HOM05D001097 ORTHO05D001009 7.9e-07 58.9 41 68.3
arahy.Tifrunner.gnm1.ann1.4LY0R9 Arachis hypogaea HOM05D000071 ORTHO05D000029 1.0e-06 58.5 58 55.2
Lj3g0017358 Lotus japonicus HOM05D001097 ORTHO05D001009 1.0e-06 58.5 41 68.3
Lalb_Chr14g0366571 Lupinus albus HOM05D001097 ORTHO05D001009 1.4e-06 58.2 41 65.9
Glyma.12G200100 Glycine max HOM05D001097 ORTHO05D001009 2.3e-06 57.4 41 65.9
Medtr2g089785 Medicago truncatula HOM05D001097 ORTHO05D001009 2.3e-06 57.4 41 68.3
Ca_01545_v3 Cicer arietinum L. HOM05D001097 ORTHO05D001009 5.1e-06 56.2 41 68.3
arahy.Tifrunner.gnm1.ann1.IB5R27 Arachis hypogaea HOM05D001097 ORTHO05D001009 6.7e-06 55.8 41 65.9
Glyma.06G299200 Glycine max HOM05D001097 ORTHO05D001009 6.7e-06 55.8 41 68.3
Phvul.005G108700 Phaseolus vulgaris HOM05D001097 ORTHO05D001009 8.8e-06 55.5 41 61.0


User provided reference genes

Program Settings