Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 2.7e-61 238.4 116 100.0
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 1.4e-54 216.1 116 91.4
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 7.1e-54 213.8 116 91.4
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 1.9e-38 162.5 117 72.6
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 1.9e-38 162.5 118 72.9
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 9.4e-38 160.2 118 72.0
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 2.7e-37 158.7 117 70.9
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 1.0e-36 156.8 119 70.6
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 3.7e-34 148.3 118 63.6
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 3.7e-34 148.3 118 65.3
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 3.1e-33 145.2 121 64.5
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 3.1e-33 145.2 117 65.0
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 1.4e-28 129.8 117 60.7
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 1.8e-28 129.4 118 56.8
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 3.0e-28 128.6 118 58.5
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 5.2e-28 127.9 118 59.3
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 1.1e-27 126.7 116 58.6
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 2.0e-27 125.9 116 56.9
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 9.7e-27 123.6 135 55.6
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 2.8e-26 122.1 118 55.9
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 2.8e-26 122.1 118 55.9
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 1.4e-25 119.8 120 55.0
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.4e-25 119.8 120 55.0
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.8e-25 119.4 120 54.2
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 3.1e-25 118.6 117 55.6
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 3.1e-25 118.6 117 54.7
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 4.1e-25 118.2 117 53.8
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 1.2e-24 116.7 117 53.8
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 3.5e-24 115.2 117 53.0
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 3.5e-24 115.2 118 58.5
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 3.5e-24 115.2 125 52.8
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 5.9e-24 114.4 115 55.7
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 5.9e-24 114.4 117 56.4
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 1.3e-23 113.2 115 51.3
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 1.3e-23 113.2 116 51.7
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 1.7e-23 112.8 115 53.0
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 2.9e-23 112.1 119 51.3
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 3.8e-23 111.7 116 51.7
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 8.5e-23 110.5 116 52.6
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 1.1e-22 110.2 117 51.3
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 1.5e-22 109.8 115 53.0
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 1.5e-22 109.8 115 50.4
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 2.5e-22 109.0 116 50.0
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 2.5e-22 109.0 116 50.0
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 3.2e-22 108.6 119 50.4
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 4.2e-22 108.2 116 51.7
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 5.5e-22 107.8 115 52.2
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 5.5e-22 107.8 118 51.7
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 1.6e-21 106.3 115 53.9
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 1.6e-21 106.3 114 51.8
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 1.6e-21 106.3 119 48.7
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 2.1e-21 105.9 114 51.8
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 3.6e-21 105.1 116 50.9
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 3.6e-21 105.1 117 47.0
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 4.7e-21 104.8 120 47.5
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 8.0e-21 104.0 122 48.4
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 1.4e-20 103.2 117 51.3
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 2.3e-20 102.4 115 46.1
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 3.0e-20 102.1 121 48.8
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 6.8e-20 100.9 115 48.7
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 8.8e-20 100.5 117 48.7
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 8.8e-20 100.5 116 50.0
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 1.2e-19 100.1 115 48.7
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 1.5e-19 99.8 118 48.3
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 4.4e-19 98.2 130 47.7
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 5.7e-19 97.8 120 49.2
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 5.7e-19 97.8 120 49.2
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 5.7e-19 97.8 117 45.3
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 9.7e-19 97.1 100 55.0
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 1.3e-18 96.7 115 48.7
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.3e-18 96.7 103 56.3
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 1.3e-18 96.7 116 48.3
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 2.2e-18 95.9 102 50.0
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 2.8e-18 95.5 119 46.2
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 2.8e-18 95.5 116 49.1
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 6.3e-18 94.4 101 55.4
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 8.3e-18 94.0 113 46.9
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 8.3e-18 94.0 116 47.4
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 1.1e-17 93.6 116 46.6
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 1.4e-17 93.2 122 43.4
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 9.1e-17 90.5 121 43.8
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 9.1e-17 90.5 76 64.5
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 1.2e-16 90.1 75 65.3
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 1.2e-16 90.1 115 44.3
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 1.3e-15 86.7 115 43.5
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 1.3e-15 86.7 116 44.8
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 1.3e-15 86.7 115 43.5
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 2.9e-15 85.5 119 44.5
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 5.0e-15 84.7 119 44.5
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 1.1e-14 83.6 118 46.6
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 3.2e-14 82.0 73 54.8
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 1.2e-13 80.1 133 39.1
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 2.1e-13 79.3 116 43.1
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 2.1e-13 79.3 100 48.0
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 8.0e-13 77.4 50 70.0
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 1.8e-12 76.3 202 30.2
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 3.4e-11 72.0 76 50.0
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 4.4e-11 71.6 89 46.1
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 7.5e-11 70.9 82 50.0
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 1.3e-10 70.1 78 46.2
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 1.3e-10 70.1 50 64.0
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 7.0e-09 64.3 124 33.9
Pp3c24_4990 Physcomitrium patens HOM05D007094 ORTHO05D008264 2.7e-08 62.4 121 33.1
Os07g0641800 Oryza sativa ssp. japonica HOM05D007094 ORTHO05D008264 7.7e-08 60.8 48 56.2
SalBow6G5897 Salvia bowleyana HOM05D007094 ORTHO05D008264 1.3e-07 60.1 56 55.4
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 2.3e-07 59.3 88 42.0
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 8.6e-07 57.4 84 39.3
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 1.1e-06 57.0 83 42.2
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 1.5e-06 56.6 88 37.5
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 1.9e-06 56.2 84 39.3
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 1.9e-06 56.2 84 39.3
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 7.2e-06 54.3 48 50.0


User provided reference genes

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