Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MI7UCB Arachis hypogaea HOM05D004182 ORTHO05D007321 1.2e-56 223.0 117 100.0
arahy.Tifrunner.gnm1.ann1.04MME8 Arachis hypogaea HOM05D004182 ORTHO05D007321 7.7e-56 220.3 117 99.1
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 7.7e-48 193.7 115 90.4
Hma1.2p1_0043F.1_g025830 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 2.2e-47 192.2 117 84.6
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 3.2e-46 188.3 115 88.7
Hma1.2p1_0594F.1_g185812 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 2.1e-45 185.7 115 87.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.0e-44 183.3 117 84.6
BolSC29t60624H Brassica oleracea HOM05D004182 ORTHO05D007321 5.2e-44 181.0 106 89.6
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 5.2e-44 181.0 106 89.6
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 5.2e-44 181.0 106 89.6
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 5.2e-44 181.0 106 89.6
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 5.2e-44 181.0 106 89.6
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 5.2e-44 181.0 106 89.6
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 1.2e-43 179.9 106 91.5
Nn029s41584 Nelumbo nucifera HOM05D004182 ORTHO05D007321 7.5e-43 177.2 107 86.9
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 6.3e-42 174.1 106 86.8
PGSC0003DMG400027965 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.1e-41 173.3 106 84.0
PGSC0003DMG400041917 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.1e-41 173.3 106 84.0
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 1.8e-41 172.6 113 83.2
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 1.7e-39 166.0 107 82.2
Nn212s45203 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.5e-38 162.2 107 82.2
Nn264s45947 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.5e-38 162.2 107 82.2
Nn304s46229 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.5e-38 162.2 107 82.2
BraSC58t46455Z Brassica rapa HOM05D004182 ORTHO05D007321 2.1e-37 159.1 112 77.7
arahy.Tifrunner.gnm1.ann1.GMF9U8 Arachis hypogaea HOM05D004182 ORTHO05D007321 2.8e-37 158.7 111 79.3
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 3.6e-37 158.3 106 81.1
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 4.7e-37 157.9 116 72.4
BraSC179t45780Z Brassica rapa HOM05D004182 ORTHO05D007321 1.2e-35 153.3 96 83.3
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 5.4e-33 144.4 83 89.2
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 5.4e-33 144.4 78 93.6
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 1.2e-32 143.3 83 88.0
BolSC49t61151H Brassica oleracea HOM05D004182 ORTHO05D007321 1.3e-31 139.8 84 88.1
arahy.Tifrunner.gnm1.ann1.096T0J Arachis hypogaea HOM05D004182 ORTHO05D007321 7.3e-30 134.0 158 51.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.6e-29 132.9 137 61.3
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 1.4e-28 129.8 69 98.6
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.4e-28 129.8 69 98.6
arahy.Tifrunner.gnm1.ann1.TV6F30 Arachis hypogaea HOM05D004182 ORTHO05D007321 5.2e-28 127.9 68 98.5
arahy.Tifrunner.gnm1.ann1.UTH6FS Arachis hypogaea HOM05D004182 ORTHO05D007321 1.5e-27 126.3 68 97.1
arahy.Tifrunner.gnm1.ann1.NV4G0I Arachis hypogaea HOM05D004182 ORTHO05D007321 4.4e-27 124.8 68 97.1
arahy.Tifrunner.gnm1.ann1.73L6LP Arachis hypogaea HOM05D004182 ORTHO05D007321 2.2e-26 122.5 68 95.6
BolSC29t60499H Brassica oleracea HOM05D004182 ORTHO05D007321 1.4e-25 119.8 72 87.5
BolSC47t61059H Brassica oleracea HOM05D004182 ORTHO05D007321 5.4e-25 117.9 71 87.3
Sopen06g015050 Solanum pennellii HOM05D004182 ORTHO05D007321 9.2e-25 117.1 68 89.7
Sopen09g020810 Solanum pennellii HOM05D004182 ORTHO05D007321 9.2e-25 117.1 68 89.7
arahy.Tifrunner.gnm1.ann1.8WTZ4N Arachis hypogaea HOM05D004182 ORTHO05D007321 4.6e-24 114.8 62 96.8
Nn064s42221 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.6e-24 114.8 68 89.7
Nn349s46475 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.6e-24 114.8 68 89.7
Nn403s46571 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.6e-24 114.8 68 89.7
Nn4g25379 Nelumbo nucifera HOM05D004182 ORTHO05D007321 4.6e-24 114.8 68 89.7
BcaC04g20782 Brassica carinata HOM05D004182 ORTHO05D007321 2.3e-23 112.5 68 86.8
CARHR282390 Cardamine hirsuta HOM05D004182 ORTHO05D007321 2.3e-23 112.5 68 86.8
CARHR282490 Cardamine hirsuta HOM05D004182 ORTHO05D007321 2.3e-23 112.5 68 86.8
Psat0s9163g0080 Pisum sativum HOM05D004182 ORTHO05D007321 5.0e-23 111.3 84 72.6
Sopen10g016590 Solanum pennellii HOM05D004182 ORTHO05D007321 6.6e-23 110.9 68 85.3
Nn031s41606 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.1e-22 110.2 69 88.4
Lsat_1_v5_gn_0_47640 Lactuca sativa HOM05D004182 ORTHO05D007321 1.9e-22 109.4 68 86.8
Gohir.1Z051066 Gossypium hirsutum HOM05D004182 ORTHO05D007321 2.5e-22 109.0 68 85.3
Gohir.A04G039255 Gossypium hirsutum HOM05D004182 ORTHO05D007321 2.5e-22 109.0 68 85.3
Gohir.A12G165450 Gossypium hirsutum HOM05D004182 ORTHO05D007321 2.5e-22 109.0 68 85.3
arahy.Tifrunner.gnm1.ann1.Y35SJI Arachis hypogaea HOM05D004182 ORTHO05D007321 3.3e-22 108.6 106 59.4
Gohir.1Z049982 Gossypium hirsutum HOM05D004182 ORTHO05D007321 3.3e-22 108.6 68 83.8
Psat7g033600 Pisum sativum HOM05D004182 ORTHO05D007321 3.3e-22 108.6 68 85.3
Psat5g118800 Pisum sativum HOM05D004182 ORTHO05D007321 5.6e-22 107.8 84 70.2
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 9.5e-22 107.1 56 98.2
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 1.2e-21 106.7 115 59.1
Hma1.2p1_1418F.1_g282260 Hydrangea macrophylla HOM05D004182 ORTHO05D007321 1.6e-21 106.3 68 83.8
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-21 105.9 54 96.3
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 2.1e-21 105.9 54 96.3
EL10Ac7g17372 Beta vulgaris HOM05D004182 ORTHO05D007321 6.2e-21 104.4 68 82.4
EL10As10g23966 Beta vulgaris HOM05D004182 ORTHO05D007321 6.2e-21 104.4 68 82.4
Atru.chr6.228 Acer truncatum HOM05D004182 ORTHO05D004271 8.0e-21 104.0 53 96.2
Psat0s2011g0080 Pisum sativum HOM05D004182 ORTHO05D007321 1.8e-20 102.8 91 63.7
Nn219s45281 Nelumbo nucifera HOM05D004182 ORTHO05D007321 3.1e-20 102.1 61 88.5
Nn442s46688 Nelumbo nucifera HOM05D004182 ORTHO05D007321 3.1e-20 102.1 61 88.5
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 5.2e-20 101.3 68 80.9
Glyma.09G133950 Glycine max HOM05D004182 ORTHO05D007321 8.9e-20 100.5 68 77.9
Cpa.g.c43052.1 Carica papaya HOM05D004182 ORTHO05D007321 2.0e-19 99.4 108 58.3
arahy.Tifrunner.gnm1.ann1.5LT2YD Arachis hypogaea HOM05D000580 ORTHO05D007321 3.4e-19 98.6 65 81.5
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 4.4e-19 98.2 114 56.1
Phvul.010G035850 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 5.8e-19 97.8 69 79.7
PGSC0003DMG400043035 Solanum tuberosum HOM05D004182 ORTHO05D007321 1.7e-18 96.3 63 84.1
CARHR044290 Cardamine hirsuta HOM05D004182 ORTHO05D007321 2.9e-18 95.5 60 81.7
Sed0007203 Sechium edule HOM05D004182 ORTHO05D007321 4.9e-18 94.7 68 79.4
Sed0018388 Sechium edule HOM05D004182 ORTHO05D007321 4.9e-18 94.7 68 79.4
Sed0018833 Sechium edule HOM05D004182 ORTHO05D007321 4.9e-18 94.7 68 79.4
Sed0022676 Sechium edule HOM05D004182 ORTHO05D007321 4.9e-18 94.7 68 79.4
Glyma.09G164000 Glycine max HOM05D004182 ORTHO05D007321 1.1e-17 93.6 55 90.9
Gohir.A05G323708 Gossypium hirsutum HOM05D004182 ORTHO05D007321 3.2e-17 92.0 49 93.9
BraSC143t45651Z Brassica rapa HOM05D004182 ORTHO05D007321 4.1e-17 91.7 60 78.3
Gohir.D05G169433 Gossypium hirsutum HOM05D004182 ORTHO05D007321 4.1e-17 91.7 68 76.5
Phvul.010G003500 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 7.0e-17 90.9 68 76.5
BraSC58t46465Z Brassica rapa HOM05D004182 ORTHO05D007321 9.2e-17 90.5 61 80.3
EL10Ac8g19701 Beta vulgaris HOM05D004182 ORTHO05D007321 1.6e-16 89.7 63 77.8
Nn070s42382 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.1e-16 89.4 69 72.5
BraSC59t46543Z Brassica rapa HOM05D004182 ORTHO05D007321 2.7e-16 89.0 64 76.6
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 2.7e-16 89.0 67 74.6
PGSC0003DMG400027964 Solanum tuberosum HOM05D004182 ORTHO05D007321 2.7e-16 89.0 58 79.3
SHI36542 Sapria himalayana HOM05D004182 ORTHO05D007321 7.8e-16 87.4 68 72.1
arahy.Tifrunner.gnm1.ann1.P0IFIP Arachis hypogaea HOM05D004182 ORTHO05D007321 2.3e-15 85.9 49 87.8
Gohir.D13G041550 Gossypium hirsutum HOM05D004182 ORTHO05D007321 2.3e-15 85.9 68 70.6
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 5.1e-15 84.7 60 75.0
arahy.Tifrunner.gnm1.ann1.0KS2YP Arachis hypogaea HOM05D004182 ORTHO05D007321 6.6e-15 84.3 48 85.4
Gorai.007G258700 Gossypium raimondii HOM05D004182 ORTHO05D007321 1.1e-14 83.6 49 85.7
Sc03g0005670 Simmondsia chinensis HOM05D004182 ORTHO05D007321 1.1e-14 83.6 58 77.6
Sc14g0004760 Simmondsia chinensis HOM05D004182 ORTHO05D007321 1.1e-14 83.6 76 68.4
Sc21g0003840 Simmondsia chinensis HOM05D004182 ORTHO05D007321 1.5e-14 83.2 66 72.7
Sed0024115 Sechium edule HOM05D004182 ORTHO05D007321 2.5e-14 82.4 68 69.1
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 4.3e-14 81.6 66 71.2
Sopen09g015240 Solanum pennellii HOM05D000004 ORTHO05D011466 7.3e-14 80.9 46 84.8
arahy.Tifrunner.gnm1.ann1.5LAD0A Arachis hypogaea HOM05D004182 ORTHO05D007321 1.2e-13 80.1 70 64.3
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.2e-13 80.1 66 69.7
Gohir.D10G118433 Gossypium hirsutum HOM05D004182 ORTHO05D007321 1.6e-13 79.7 49 77.6
Gohir.A07G125450 Gossypium hirsutum HOM05D004182 ORTHO05D007321 4.7e-13 78.2 49 79.6
VMungo1127G1475 Vigna mungo HOM05D000959 ORTHO05D000775 4.7e-13 78.2 63 66.7
VMungo0720G0883 Vigna mungo HOM05D004182 ORTHO05D007321 6.2e-13 77.8 46 87.0
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 4.0e-12 75.1 50 80.0
HPP92_028384 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.9e-12 73.9 49 83.7
HPP92_028405 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.9e-12 73.9 49 83.7
HPP92_028414 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.9e-12 73.9 49 83.7
HPP92_028420 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.9e-12 73.9 49 83.7
HPP92_028429 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.9e-12 73.9 49 83.7
HPP92_028433 Vanilla planifolia HOM05D004182 ORTHO05D007321 8.9e-12 73.9 49 83.7
Nn6g32823 Nelumbo nucifera HOM05D004182 ORTHO05D007321 2.0e-11 72.8 78 61.5
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 7.5e-11 70.9 108 50.9
CAN.G1119.15 Capsicum annuum HOM05D002978 ORTHO05D003339 7.5e-11 70.9 62 62.9
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 1.7e-10 69.7 108 50.9
Nn8g40575 Nelumbo nucifera HOM05D004182 ORTHO05D007321 1.7e-10 69.7 48 79.2
Sed0012210 Sechium edule HOM05D004182 ORTHO05D007321 2.9e-10 68.9 68 60.3
Phvul.010G068400 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 6.4e-10 67.8 48 81.2
Phvul.003G041600 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 1.4e-09 66.6 49 77.6
Glyma.01G163400 Glycine max HOM05D004182 ORTHO05D007321 5.4e-09 64.7 49 75.5
BcaC05g26432 Brassica carinata HOM05D004182 ORTHO05D007321 9.2e-09 63.9 58 63.8
Glyma.03G084500 Glycine max HOM05D004182 ORTHO05D007321 1.2e-08 63.5 43 83.7
Psat3g186560 Pisum sativum HOM05D001387 ORTHO05D001250 7.8e-08 60.8 48 70.8
Migut.I00342 Erythranthe guttata HOM05D004182 ORTHO05D007321 1.3e-07 60.1 38 86.8
ECA247G0006 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.3e-07 59.3 81 49.4
Phvul.010G151800 Phaseolus vulgaris HOM05D004182 ORTHO05D007321 3.9e-07 58.5 68 54.4
Ciclev10010312m.g Citrus clementina HOM05D000071 ORTHO05D000029 4.3e-06 55.1 37 81.1


User provided reference genes

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