Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.MB5P1Q Arachis hypogaea HOM05D006191 ORTHO05D007660 4.0e-23 110.9 72 100.0
arahy.Tifrunner.gnm1.ann1.HDQ2FX Arachis hypogaea HOM05D006191 ORTHO05D007660 9.0e-23 109.8 72 98.6
Glyma.04G138500 Glycine max HOM05D006191 ORTHO05D007660 3.4e-22 107.8 72 97.2
Phvul.005G027500 Phaseolus vulgaris HOM05D006191 ORTHO05D007660 4.5e-22 107.5 72 97.2
Lalb_Chr04g0264081 Lupinus albus HOM05D006191 ORTHO05D007660 1.7e-21 105.5 72 93.1
Lalb_Chr25g0282111 Lupinus albus HOM05D006191 ORTHO05D007660 1.7e-21 105.5 72 93.1
Lj3g0010990 Lotus japonicus HOM05D006191 ORTHO05D007660 1.9e-20 102.1 72 91.7
Psat5g217760 Pisum sativum HOM05D006191 ORTHO05D007660 1.9e-20 102.1 72 90.3
Medtr3g017440 Medicago truncatula HOM05D006191 ORTHO05D007660 7.1e-20 100.1 72 87.5
TPR.G17809 Trifolium pratense HOM05D006191 ORTHO05D007660 8.7e-18 93.2 68 85.3
Glyma.08G302200 Glycine max HOM05D006191 ORTHO05D007660 3.3e-17 91.3 68 83.8
CDE02G2705 Ceratophyllum demersum HOM05D006191 ORTHO05D007660 4.3e-17 90.9 68 80.9
Lj6g0026433 Lotus japonicus HOM05D006191 ORTHO05D007660 4.3e-17 90.9 68 82.4
PSO339G4970 Papaver somniferum HOM05D006191 ORTHO05D007660 4.3e-17 90.9 68 88.2
PSO384G4772 Papaver somniferum HOM05D006191 ORTHO05D007660 4.3e-17 90.9 68 88.2
CANSAT54G1797 Cannabis sativa HOM05D006191 ORTHO05D007660 9.7e-17 89.7 68 85.3
Migut.D00650 Erythranthe guttata HOM05D006191 ORTHO05D007660 1.3e-16 89.4 68 83.8
Glyma.18G117700 Glycine max HOM05D006191 ORTHO05D007660 1.3e-16 89.4 68 82.4
Manes.01G180500 Manihot esculenta HOM05D006191 ORTHO05D007660 1.3e-16 89.4 68 83.8
TPR.G8494 Trifolium pratense HOM05D006191 ORTHO05D007660 1.3e-16 89.4 68 82.4
HPP92_025477 Vanilla planifolia HOM05D006191 ORTHO05D007660 1.3e-16 89.4 68 85.3
MBI13_g01622_MAGBIO Magnolia biondii HOM05D006191 ORTHO05D007660 1.6e-16 89.0 68 82.4
Medtr3g434780 Medicago truncatula HOM05D006191 ORTHO05D007660 1.6e-16 89.0 68 82.4
Lalb_Chr07g0183161 Lupinus albus HOM05D006191 ORTHO05D007660 2.8e-16 88.2 68 83.8
DCAR_002114 Daucus carota HOM05D006191 ORTHO05D007660 3.7e-16 87.8 68 80.9
Gohir.D13G004600 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.7e-16 87.8 75 78.7
Gorai.013G005000 Gossypium raimondii HOM05D006191 ORTHO05D007660 3.7e-16 87.8 75 80.0
COL.COLO4_04799 Corchorus olitorius HOM05D006191 ORTHO05D007660 4.8e-16 87.4 68 80.9
Oeu030629.1 Olea europaea HOM05D006191 ORTHO05D007660 4.8e-16 87.4 68 82.4
GSVIVG01037255001 Vitis vinifera HOM05D006191 ORTHO05D007660 4.8e-16 87.4 68 83.8
CSS0014439 Camellia sinensis var. sinensis HOM05D006191 ORTHO05D007660 6.3e-16 87.0 68 82.4
Duzib106G0217 Durio zibethinus HOM05D006191 ORTHO05D007660 6.3e-16 87.0 68 82.4
Duzib128G0357 Durio zibethinus HOM05D006191 ORTHO05D007660 6.3e-16 87.0 68 82.4
Gohir.A10G183900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 6.3e-16 87.0 68 82.4
Gohir.D10G191200 Gossypium hirsutum HOM05D006191 ORTHO05D007660 6.3e-16 87.0 68 82.4
Gorai.011G214000 Gossypium raimondii HOM05D006191 ORTHO05D007660 6.3e-16 87.0 68 82.4
Thecc.10G162100 Theobroma cacao HOM05D006191 ORTHO05D007660 6.3e-16 87.0 68 80.9
TAR623G0607 Trochodendron aralioides HOM05D006191 ORTHO05D007660 6.3e-16 87.0 68 82.4
Potri.009G071900 Populus trichocarpa HOM05D006191 ORTHO05D007660 8.2e-16 86.7 68 80.9
Sabra09G0054200 Salix brachista HOM05D006191 ORTHO05D007660 8.2e-16 86.7 68 80.9
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 80.9
AagrBONN_evm.TU.Sc2ySwM_362.136 Anthoceros agrestis HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 79.4
CiPaw.14G114100 Carya illinoinensis HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 80.9
Nn2g14883 Nelumbo nucifera HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 79.4
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 1.1e-15 86.3 68 79.4
Potri.001G277100 Populus trichocarpa HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 79.4
THA.LOC104819131 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 80.9
TWI38G0245 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 79.4
TWI63G0884 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 1.1e-15 86.3 68 79.4
Atru.chr12.1349 Acer truncatum HOM05D006191 ORTHO05D007660 1.4e-15 85.9 68 79.4
Eucgr.J01186 Eucalyptus grandis HOM05D006191 ORTHO05D007660 1.4e-15 85.9 68 77.9
Hma1.2p1_0115F.1_g055930 Hydrangea macrophylla HOM05D006191 ORTHO05D007660 1.4e-15 85.9 68 79.4
Sopen12g034350 Solanum pennellii HOM05D006191 ORTHO05D007660 1.4e-15 85.9 68 79.4
MELO3C014567.2 Cucumis melo HOM05D006191 ORTHO05D007660 1.8e-15 85.5 68 80.9
CsaV3_6G039080 Cucumis sativus L. HOM05D006191 ORTHO05D007660 1.8e-15 85.5 68 80.9
Lsat_1_v5_gn_2_33900 Lactuca sativa HOM05D006191 ORTHO05D007660 1.8e-15 85.5 68 77.9
Oeu001494.1 Olea europaea HOM05D006191 ORTHO05D007660 2.4e-15 85.1 68 80.9
PGR031G0246 Punica granatum HOM05D006191 ORTHO05D007660 2.4e-15 85.1 68 77.9
Sopen11g024870 Solanum pennellii HOM05D006191 ORTHO05D007660 2.4e-15 85.1 68 79.4
PGSC0003DMG400031241 Solanum tuberosum HOM05D006191 ORTHO05D007660 2.4e-15 85.1 68 79.4
Dinv05064 Davidia involucrata HOM05D006191 ORTHO05D007660 3.1e-15 84.7 68 77.9
Duzib114G0719 Durio zibethinus HOM05D006191 ORTHO05D007660 3.1e-15 84.7 68 79.4
Peaxi162Scf00004g04011 Petunia axillaris HOM05D006191 ORTHO05D007660 3.1e-15 84.7 68 77.9
Sed0001199 Sechium edule HOM05D006191 ORTHO05D007660 3.1e-15 84.7 68 79.4
Sc11g0006400 Simmondsia chinensis HOM05D006191 ORTHO05D007660 3.1e-15 84.7 68 80.9
THA.LOC104825593 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 3.1e-15 84.7 68 79.4
VMungo1080G0693 Vigna mungo HOM05D006191 ORTHO05D007660 3.1e-15 84.7 117 59.0
Aa31LG5G18460 Aethionema arabicum HOM05D006191 ORTHO05D007660 4.1e-15 84.3 75 73.3
CARHR082640 Cardamine hirsuta HOM05D006191 ORTHO05D007660 4.1e-15 84.3 69 72.5
Cpa.g.sc3.359 Carica papaya HOM05D006191 ORTHO05D007660 4.1e-15 84.3 68 79.4
CAN.G484.24 Capsicum annuum HOM05D006191 ORTHO05D007660 5.3e-15 84.0 68 77.9
CDE04G1776 Ceratophyllum demersum HOM05D003123 ORTHO05D003492 6.9e-15 83.6 68 82.4
Nitab4.5_0004018g0100 Nicotiana tabacum HOM05D006191 ORTHO05D007660 6.9e-15 83.6 68 76.5
QL01p017491 Quercus lobata HOM05D006191 ORTHO05D007660 9.0e-15 83.2 68 79.4
Ciclev10017371m.g Citrus clementina HOM05D006191 ORTHO05D007660 1.2e-14 82.8 69 79.7
Solyc12g099705.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 1.2e-14 82.8 68 80.9
Thhalv10021870m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 1.5e-14 82.4 68 77.9
HanXRQChr06g0182571 Helianthus annuus HOM05D006191 ORTHO05D007660 2.0e-14 82.0 68 75.0
Thhalv10022475m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 2.6e-14 81.6 68 76.5
Solyc11g150142.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 2.6e-14 81.6 68 70.6
Atru.chr3.2798 Acer truncatum HOM05D006191 ORTHO05D007660 3.4e-14 81.3 64 82.8
CAN.G1850.1 Capsicum annuum HOM05D006191 ORTHO05D007660 3.4e-14 81.3 68 76.5
Potri.003G197801 Populus trichocarpa HOM05D006191 ORTHO05D007660 4.5e-14 80.9 68 76.5
Potri.T125106 Populus trichocarpa HOM05D006191 ORTHO05D007660 4.5e-14 80.9 68 76.5
Pp3c9_12820 Physcomitrium patens HOM05D006191 ORTHO05D007660 7.7e-14 80.1 69 66.7
EL10Ac2g02816 Beta vulgaris HOM05D006191 ORTHO05D007660 1.3e-13 79.3 68 73.5
A05p40330 Brassica napus HOM05D006191 ORTHO05D007660 1.7e-13 79.0 69 73.9
Prupe.4G268400 Prunus persica HOM05D006191 ORTHO05D007660 1.7e-13 79.0 65 80.0
BcaB04g21265 Brassica carinata HOM05D006191 ORTHO05D007660 2.2e-13 78.6 70 72.9
Cc01_g05600 Coffea canephora HOM05D006191 ORTHO05D007660 5.0e-13 77.4 68 76.5
Mapoly0046s0044 Marchantia polymorpha HOM05D006191 ORTHO05D007660 5.0e-13 77.4 68 77.9
BcaC09g47961 Brassica carinata HOM05D006191 ORTHO05D007660 6.5e-13 77.0 64 73.4
A03p35550 Brassica napus HOM05D006191 ORTHO05D007660 6.5e-13 77.0 68 73.5
C03p43190 Brassica napus HOM05D006191 ORTHO05D007660 6.5e-13 77.0 68 73.5
C05p59410 Brassica napus HOM05D006191 ORTHO05D007660 6.5e-13 77.0 69 71.0
BolC3t16588H Brassica oleracea HOM05D006191 ORTHO05D007660 6.5e-13 77.0 68 73.5
BolC5t34598H Brassica oleracea HOM05D006191 ORTHO05D007660 6.5e-13 77.0 69 71.0
BraA03t12731Z Brassica rapa HOM05D006191 ORTHO05D007660 6.5e-13 77.0 68 73.5
Sp3g06830 Schrenkiella parvula HOM05D006191 ORTHO05D007660 8.5e-13 76.6 65 75.4
MD00G1126200 Malus domestica HOM05D006191 ORTHO05D007660 1.4e-12 75.9 65 75.4
MD00G1154200 Malus domestica HOM05D006191 ORTHO05D007660 1.4e-12 75.9 65 75.4
Zm00001eb432230 Zea mays HOM05D006191 ORTHO05D007660 1.4e-12 75.9 69 72.5
Carub.0003s0749 Capsella rubella HOM05D006191 ORTHO05D007660 1.9e-12 75.5 65 72.3
ECA238G0093 Erigeron canadensis HOM05D006191 ORTHO05D007660 1.9e-12 75.5 68 69.1
Sabra16G0171200 Salix brachista HOM05D006191 ORTHO05D007660 2.5e-12 75.1 71 71.8
BcaC05g29581 Brassica carinata HOM05D006191 ORTHO05D007660 3.2e-12 74.7 69 68.1
Pp3c15_6032 Physcomitrium patens HOM05D006191 ORTHO05D007660 4.2e-12 74.3 69 63.8
RcHm_v2.0_Chr5g0050711 Rosa chinensis HOM05D006191 ORTHO05D007660 4.2e-12 74.3 68 67.6
ClCG02G022950 Citrullus lanatus HOM05D006191 ORTHO05D007660 5.5e-12 73.9 42 83.3
SMO301G0059 Selaginella moellendorffii HOM05D006191 ORTHO05D007660 5.5e-12 73.9 68 72.1
ATR0745G066 Amborella trichopoda HOM05D006191 ORTHO05D007660 7.2e-12 73.6 69 75.4
Haze_23211 Corylus avellana HOM05D000001 ORTHO05D000003 9.4e-12 73.2 42 81.0
AT3G07910 Arabidopsis thaliana HOM05D006191 ORTHO05D007660 1.2e-11 72.8 68 69.1
BcaC09g47957 Brassica carinata HOM05D006191 ORTHO05D007660 1.6e-11 72.4 69 71.0
BolC1t05519H Brassica oleracea HOM05D006191 ORTHO05D007660 1.6e-11 72.4 69 71.0
BraA01t04352Z Brassica rapa HOM05D006191 ORTHO05D007660 1.6e-11 72.4 69 71.0
Aqoxy2G00346 Aquilegia oxysepala HOM05D006191 ORTHO05D007660 2.1e-11 72.0 64 62.5
Gohir.A13G004900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 2.1e-11 72.0 75 70.7
AUR62037186 Chenopodium quinoa HOM05D006191 ORTHO05D007660 4.6e-11 70.9 42 76.2
FvH4_3g28030 Fragaria vesca HOM05D006191 ORTHO05D007660 6.1e-11 70.5 68 64.7
FAN16G3748 Fragaria x ananassa HOM05D006191 ORTHO05D007660 6.1e-11 70.5 68 64.7
FAN21G2777 Fragaria x ananassa HOM05D006191 ORTHO05D007660 6.1e-11 70.5 68 64.7
MCO15G227 Micromonas commoda HOM05D006191 ORTHO05D007660 1.0e-10 69.7 61 67.2
Zm00001eb068350 Zea mays HOM05D006191 ORTHO05D007660 1.0e-10 69.7 63 73.0
FAN25G1591 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.4e-10 69.3 68 63.2
Cfa010050 Carpinus fangiana HOM05D000477 ORTHO05D000338 3.0e-10 68.2 60 76.7
Cre01.g010500 Chlamydomonas reinhardtii HOM05D006191 ORTHO05D007660 1.3e-08 62.8 42 64.3
PRCOL_00002293 Prasinoderma coloniale HOM05D006191 ORTHO05D007660 1.1e-07 59.7 69 46.4
TAR633G2362 Trochodendron aralioides HOM05D006191 ORTHO05D007660 2.6e-06 55.1 69 58.0
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 3.4e-06 54.7 34 79.4


User provided reference genes

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