Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 2.3e-169 599.0 333 100.0
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 7.9e-106 387.9 334 73.1
arahy.Tifrunner.gnm1.ann1.5875FQ Arachis hypogaea HOM05D005570 ORTHO05D005864 1.3e-63 247.7 157 86.0
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 3.7e-63 246.1 159 85.5
arahy.Tifrunner.gnm1.ann1.JXA9IA Arachis hypogaea HOM05D005570 ORTHO05D005864 1.4e-62 244.2 157 85.4
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 8.0e-58 228.4 155 82.6
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 1.8e-57 227.3 209 65.1
arahy.Tifrunner.gnm1.ann1.TQSI6C Arachis hypogaea HOM05D005570 ORTHO05D005864 1.5e-56 224.2 173 74.0
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 2.0e-56 223.8 197 68.5
arahy.Tifrunner.gnm1.ann1.093KP0 Arachis hypogaea HOM05D002360 ORTHO05D006297 5.6e-51 205.7 150 77.3
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 1.1e-46 191.4 138 85.5
arahy.Tifrunner.gnm1.ann1.C5PCA3 Arachis hypogaea HOM05D007788 ORTHO05D008462 6.0e-45 185.7 148 77.0
arahy.Tifrunner.gnm1.ann1.NQ2DUC Arachis hypogaea HOM05D005570 ORTHO05D005864 5.6e-43 179.1 155 69.0
arahy.Tifrunner.gnm1.ann1.9489MQ Arachis hypogaea HOM05D006218 ORTHO05D007338 1.2e-42 177.9 106 90.6
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 1.6e-42 177.6 106 87.7
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 3.8e-39 166.4 153 66.0
arahy.Tifrunner.gnm1.ann1.411P2H Arachis hypogaea HOM05D001273 ORTHO05D000023 5.4e-38 162.5 127 85.8
arahy.Tifrunner.gnm1.ann1.TDW0BY Arachis hypogaea HOM05D005185 ORTHO05D006075 4.3e-35 152.9 117 76.9
arahy.Tifrunner.gnm1.ann1.RXW997 Arachis hypogaea HOM05D003997 ORTHO05D002698 4.8e-34 149.4 153 69.3
arahy.Tifrunner.gnm1.ann1.H72Z00 Arachis hypogaea HOM05D003946 ORTHO05D005257 2.4e-33 147.1 86 89.5
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 2.2e-31 140.6 152 59.9
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 3.8e-31 139.8 151 54.3
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 4.9e-31 139.4 153 57.5
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 6.4e-31 139.0 156 55.1
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 8.4e-31 138.7 152 55.3
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 1.1e-30 138.3 152 59.2
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.1e-30 138.3 155 56.1
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 2.4e-30 137.1 143 55.9
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 5.1e-28 129.4 145 53.1
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 5.1e-28 129.4 147 54.4
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 8.7e-28 128.6 150 54.7
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.5e-27 127.1 137 52.6
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 2.5e-27 127.1 149 52.3
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 3.3e-27 126.7 128 58.6
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 1.3e-26 124.8 147 53.1
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 1.3e-26 124.8 129 55.8
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 1.3e-26 124.8 134 50.0
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 2.8e-26 123.6 139 54.7
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 3.6e-26 123.2 150 53.3
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 4.8e-26 122.9 150 49.3
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 4.8e-26 122.9 129 55.0
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 4.8e-26 122.9 129 55.0
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 4.8e-26 122.9 146 50.7
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 6.2e-26 122.5 122 54.9
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 1.1e-25 121.7 152 50.0
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 1.1e-25 121.7 146 50.7
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 1.1e-25 121.7 146 54.1
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 1.4e-25 121.3 151 49.0
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.8e-25 120.9 146 50.0
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 2.4e-25 120.6 152 48.0
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 2.4e-25 120.6 153 49.7
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 3.1e-25 120.2 149 51.7
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 4.0e-25 119.8 124 52.4
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 4.0e-25 119.8 153 47.1
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 5.3e-25 119.4 132 51.5
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 5.3e-25 119.4 124 52.4
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 9.0e-25 118.6 146 49.3
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 9.0e-25 118.6 146 49.3
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 9.0e-25 118.6 145 52.4
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 9.0e-25 118.6 124 52.4
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 9.0e-25 118.6 123 52.8
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 9.0e-25 118.6 144 47.9
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 1.2e-24 118.2 201 43.8
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 1.5e-24 117.9 146 49.3
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 1.5e-24 117.9 153 52.9
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 2.0e-24 117.5 130 52.3
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 2.6e-24 117.1 139 48.9
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 2.6e-24 117.1 153 48.4
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 3.4e-24 116.7 142 51.4
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 4.5e-24 116.3 146 48.6
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 4.5e-24 116.3 152 52.0
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 7.6e-24 115.5 131 50.4
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 7.6e-24 115.5 148 47.3
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 9.9e-24 115.2 129 49.6
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 9.9e-24 115.2 124 53.2
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 1.3e-23 114.8 128 50.8
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 1.3e-23 114.8 157 46.5
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 1.7e-23 114.4 150 46.7
arahy.Tifrunner.gnm1.ann1.N9VQ32 Arachis hypogaea HOM05D002986 ORTHO05D003966 2.2e-23 114.0 72 84.7
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 3.8e-23 113.2 161 49.7
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 3.8e-23 113.2 152 47.4
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 4.9e-23 112.8 145 48.3
arahy.Tifrunner.gnm1.ann1.Y9P708 Arachis hypogaea HOM05D000386 ORTHO05D000406 6.4e-23 112.5 158 58.2
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 6.4e-23 112.5 144 50.0
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 6.4e-23 112.5 155 48.4
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 6.4e-23 112.5 155 48.4
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 8.4e-23 112.1 135 50.4
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 8.4e-23 112.1 150 50.7
arahy.Tifrunner.gnm1.ann1.4C0J8W Arachis hypogaea HOM05D000001 ORTHO05D001705 1.9e-22 110.9 83 74.7
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 1.9e-22 110.9 125 52.8
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 3.2e-22 110.2 150 47.3
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 4.2e-22 109.8 152 45.4
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 9.3e-22 108.6 136 50.7
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 1.2e-21 108.2 127 50.4
arahy.Tifrunner.gnm1.ann1.9DH571 Arachis hypogaea HOM05D016340 ORTHO05D005864 3.5e-21 106.7 118 57.6
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 3.5e-21 106.7 151 44.4
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 7.9e-21 105.5 149 47.0
arahy.Tifrunner.gnm1.ann1.H2MGKB Arachis hypogaea HOM05D010382 ORTHO05D005864 1.0e-20 105.1 140 62.9
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 2.3e-20 104.0 189 39.2
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 2.3e-20 104.0 138 46.4
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 3.0e-20 103.6 151 43.7
arahy.Tifrunner.gnm1.ann1.9VNC38 Arachis hypogaea HOM05D005570 ORTHO05D005864 6.7e-20 102.4 146 59.6
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 6.7e-20 102.4 150 42.0
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 8.7e-20 102.1 107 55.1
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 8.7e-20 102.1 126 48.4
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 8.7e-20 102.1 130 45.4
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 1.5e-19 101.3 107 56.1
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 1.5e-19 101.3 159 41.5
arahy.Tifrunner.gnm1.ann1.BJCX7Z Arachis hypogaea HOM05D010382 ORTHO05D005864 1.9e-19 100.9 147 53.1
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 2.5e-19 100.5 149 43.0
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 3.3e-19 100.1 151 43.0
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 4.3e-19 99.8 122 46.7
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 5.6e-19 99.4 203 37.9
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 7.4e-19 99.0 117 46.2
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 7.4e-19 99.0 103 55.3
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 9.6e-19 98.6 116 52.6
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 9.6e-19 98.6 151 45.0
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.3e-18 98.2 127 52.0
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 2.8e-18 97.1 120 46.7
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 8.1e-18 95.5 117 57.3
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.1e-17 95.1 104 53.8
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 5.8e-16 89.4 150 40.7
arahy.Tifrunner.gnm1.ann1.KW6T12 Arachis hypogaea HOM05D004774 ORTHO05D005514 2.2e-15 87.4 118 55.9
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 2.9e-15 87.0 150 40.0
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 3.8e-15 86.7 158 36.7
arahy.Tifrunner.gnm1.ann1.QI3CHY Arachis hypogaea HOM05D005570 ORTHO05D005864 1.4e-14 84.7 62 91.9
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 1.9e-14 84.3 102 48.0
arahy.Tifrunner.gnm1.ann1.EWZ1G2 Arachis hypogaea HOM05D010382 ORTHO05D005864 4.2e-14 83.2 136 52.9
arahy.Tifrunner.gnm1.ann1.NDR98S Arachis hypogaea HOM05D000257 ORTHO05D008527 5.5e-14 82.8 76 69.7
arahy.Tifrunner.gnm1.ann1.QLC8G3 Arachis hypogaea HOM05D010382 ORTHO05D005864 5.5e-14 82.8 50 86.0
arahy.Tifrunner.gnm1.ann1.XZE3L4 Arachis hypogaea HOM05D000001 ORTHO05D001705 5.5e-14 82.8 157 45.2
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 9.3e-14 82.0 90 52.2
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 9.3e-14 82.0 135 43.0
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 2.7e-13 80.5 104 56.7
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 3.5e-13 80.1 114 45.6
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 6.0e-13 79.3 136 39.0
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 3.0e-12 77.0 86 54.7
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 3.9e-12 76.6 112 46.4
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 8.7e-12 75.5 106 42.5
arahy.Tifrunner.gnm1.ann1.JHWM2T Arachis hypogaea HOM05D000384 ORTHO05D006260 8.7e-12 75.5 94 54.3
arahy.Tifrunner.gnm1.ann1.A2CAGE Arachis hypogaea HOM05D010382 ORTHO05D005864 2.5e-11 73.9 68 66.2
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 1.3e-10 71.6 165 36.4
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 1.6e-10 71.2 149 37.6
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 4.8e-10 69.7 77 48.1
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 6.2e-10 69.3 140 35.0
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 6.2e-10 69.3 140 35.0
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 6.2e-10 69.3 103 42.7
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 8.2e-10 68.9 75 49.3
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 8.2e-10 68.9 89 47.2
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 3.1e-09 67.0 37 91.9
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 4.1e-09 66.6 74 45.9
arahy.Tifrunner.gnm1.ann1.H4TYTD Arachis hypogaea HOM05D003922 ORTHO05D004492 5.3e-09 66.2 75 57.3
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 1.2e-08 65.1 134 37.3
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.5e-08 64.7 149 40.9
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 2.0e-08 64.3 93 50.5
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 3.4e-08 63.5 94 41.5
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 3.4e-08 63.5 127 39.4
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 4.5e-08 63.2 114 38.6
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 1.0e-07 62.0 123 35.0
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 1.3e-07 61.6 62 50.0
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 1.3e-07 61.6 105 41.9
arahy.Tifrunner.gnm1.ann1.MX4EXC Arachis hypogaea HOM05D004380 ORTHO05D005134 2.2e-07 60.8 89 53.9
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 6.5e-07 59.3 94 41.5
arahy.Tifrunner.gnm1.ann1.689Y8G Arachis hypogaea HOM05D005570 ORTHO05D005864 6.5e-07 59.3 34 91.2
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 8.4e-07 58.9 63 61.9
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 8.4e-07 58.9 105 42.9
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 1.1e-06 58.5 97 42.3
arahy.Tifrunner.gnm1.ann1.HAI34B Arachis hypogaea HOM05D005194 ORTHO05D003357 2.5e-06 57.4 39 84.6
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 2.5e-06 57.4 108 38.9
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 3.2e-06 57.0 122 33.6
arahy.Tifrunner.gnm1.ann1.MP6I0Q Arachis hypogaea HOM05D010382 ORTHO05D005864 5.5e-06 56.2 30 96.7


User provided reference genes

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