Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.5e-102 376.3 211 100.0
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.9e-100 369.4 211 90.5
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 9.9e-86 320.5 211 80.1
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 3.7e-85 318.5 211 80.6
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.0e-82 310.5 213 79.3
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 5.1e-82 308.1 222 75.2
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 3.2e-76 288.9 212 74.1
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.1e-75 286.2 213 75.1
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 5.1e-74 281.6 201 77.6
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 6.6e-74 281.2 214 73.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 8.7e-74 280.8 217 68.2
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 2.5e-73 279.3 211 69.2
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 3.3e-73 278.9 221 67.0
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 5.6e-73 278.1 214 69.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 7.3e-73 277.7 231 65.4
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.8e-72 275.8 211 70.1
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 4.8e-72 275.0 215 71.2
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 8.1e-72 274.2 214 68.2
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.4e-71 273.5 212 68.4
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.4e-71 273.5 221 67.0
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.4e-71 273.5 219 67.1
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 4.0e-71 271.9 211 69.7
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 4.0e-71 271.9 211 69.7
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 5.3e-71 271.6 216 69.0
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 3.4e-70 268.9 214 64.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 4.4e-70 268.5 216 69.0
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 4.4e-70 268.5 215 68.4
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 5.8e-70 268.1 221 63.8
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 3.8e-69 265.4 214 66.4
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 6.4e-69 264.6 228 64.0
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.1e-68 263.8 155 83.2
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.4e-68 263.5 216 66.7
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 2.4e-68 262.7 213 67.1
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.4e-68 262.7 155 82.6
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.4e-68 262.7 211 64.9
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 3.2e-68 262.3 223 63.2
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.2e-68 262.3 232 62.1
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 3.2e-68 262.3 214 66.4
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 4.2e-68 261.9 239 61.1
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 5.4e-68 261.5 218 62.4
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 9.3e-68 260.8 217 66.8
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 9.3e-68 260.8 216 66.7
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.2e-67 260.4 216 66.7
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.2e-67 260.4 211 64.5
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.6e-67 260.0 237 62.9
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.7e-66 256.5 216 63.4
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.3e-66 256.1 219 66.7
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 3.9e-66 255.4 150 82.0
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 5.1e-66 255.0 220 64.1
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 6.6e-66 254.6 219 66.7
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 6.6e-66 254.6 219 62.1
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 8.7e-66 254.2 211 70.1
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.9e-65 253.1 217 60.8
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 2.5e-65 252.7 210 64.8
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 4.3e-65 251.9 211 62.6
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 5.6e-65 251.5 211 62.1
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.1e-64 249.6 211 61.6
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 2.8e-64 249.2 155 77.4
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 3.6e-64 248.8 155 78.1
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 3.6e-64 248.8 150 79.3
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 6.2e-64 248.1 195 66.7
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 6.2e-64 248.1 150 80.0
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 6.9e-63 244.6 211 63.0
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.8e-62 241.5 195 65.1
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.8e-62 241.5 136 85.3
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.2e-61 239.6 214 65.4
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.9e-61 239.2 149 77.9
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 6.4e-61 238.0 152 75.0
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 6.4e-61 238.0 218 57.8
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 9.3e-60 234.2 211 63.0
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.1e-59 233.0 207 63.8
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 4.6e-59 231.9 214 57.0
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.0e-58 230.7 151 77.5
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 6.7e-58 228.0 149 72.5
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 6.7e-58 228.0 153 73.2
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 6.7e-58 228.0 213 55.9
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.1e-57 227.3 214 61.2
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.5e-57 226.9 211 63.5
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.5e-57 226.1 212 56.1
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 9.6e-57 224.2 200 58.0
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.3e-56 223.8 155 71.6
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 2.1e-56 223.0 155 72.3
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.8e-55 219.9 151 70.9
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.6e-54 216.1 213 55.9
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 2.6e-54 216.1 128 78.9
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 7.6e-54 214.5 150 70.7
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 7.6e-54 214.5 150 70.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.2e-53 213.0 161 68.3
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 2.2e-53 213.0 220 60.0
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 2.9e-53 212.6 223 53.8
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 4.9e-53 211.8 196 59.2
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 6.5e-53 211.5 217 56.7
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.4e-52 210.3 154 66.2
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 3.2e-52 209.1 175 60.0
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 4.2e-52 208.8 218 55.0
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 9.3e-52 207.6 156 60.9
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 3.0e-50 202.6 235 51.9
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.5e-49 200.3 156 60.3
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 3.7e-48 195.7 109 87.2
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.0e-46 189.9 144 63.9
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 2.9e-45 186.0 109 80.7
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.6e-43 180.3 110 80.9
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 9.0e-39 164.5 171 55.6
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 9.4e-36 154.5 161 57.8
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 2.7e-35 152.9 160 56.2
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.4e-34 150.6 101 72.3
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.0e-33 146.7 148 56.8
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 3.3e-33 146.0 146 58.9
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.4e-31 140.6 160 53.1
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.0e-29 134.4 72 86.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 6.1e-27 125.2 147 41.5
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 8.5e-21 104.8 68 72.1
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 8.5e-21 104.8 68 72.1
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 3.0e-18 96.3 101 55.4
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.2e-14 84.3 58 62.1
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 6.5e-13 78.6 49 75.5


User provided reference genes

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