Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 4.8e-133 478.0 272 100.0
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 3.4e-115 418.7 316 82.3
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 3.7e-45 186.0 273 52.0
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 3.6e-40 169.5 254 52.8
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 1.2e-38 164.5 249 49.4
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 1.5e-38 164.1 248 51.6
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 2.0e-38 163.7 253 52.6
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 1.2e-35 154.5 252 48.4
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 5.6e-33 145.6 248 48.0
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 1.7e-29 134.0 253 47.0
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 6.2e-24 115.5 275 39.3
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 4.0e-23 112.8 272 38.2
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 1.5e-22 110.9 267 36.7
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 3.4e-22 109.8 268 38.4
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 2.9e-21 106.7 274 39.1
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 3.8e-21 106.3 270 42.2
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 2.4e-20 103.6 202 43.6
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 5.4e-20 102.4 271 37.6
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 7.1e-20 102.1 268 37.3
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 2.7e-19 100.1 268 36.9
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 3.5e-19 99.8 206 36.4
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 4.6e-19 99.4 267 37.5
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 6.0e-19 99.0 279 36.6
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.0e-18 98.2 206 38.3
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 1.3e-18 97.8 235 37.9
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 6.7e-18 95.5 269 35.3
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 1.5e-17 94.4 151 44.4
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.3e-17 93.2 206 38.3
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 4.3e-17 92.8 270 37.8
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 1.6e-16 90.9 128 51.6
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 2.1e-16 90.5 276 36.2
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 2.8e-16 90.1 184 38.0
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 3.6e-16 89.7 128 53.9
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 4.8e-16 89.4 278 34.2
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 4.8e-16 89.4 150 39.3
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 4.8e-16 89.4 69 65.2
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 8.1e-16 88.6 152 42.8
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 1.1e-15 88.2 122 49.2
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.4e-15 87.8 246 37.8
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 1.8e-15 87.4 69 63.8
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 2.4e-15 87.0 184 39.7
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 3.1e-15 86.7 239 39.7
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 1.2e-14 84.7 273 34.1
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 1.5e-14 84.3 271 33.9
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 2.6e-14 83.6 266 35.3
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.4e-14 83.2 273 34.1
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 4.5e-14 82.8 61 63.9
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 4.5e-14 82.8 204 34.8
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 9.9e-14 81.6 192 37.0
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 1.3e-13 81.3 262 34.7
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.3e-13 81.3 128 45.3
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 1.3e-13 81.3 236 34.7
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.2e-13 80.5 207 39.1
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.9e-13 80.1 129 45.7
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 3.8e-13 79.7 207 38.6
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 3.8e-13 79.7 277 32.5
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 6.4e-13 79.0 274 31.8
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 8.4e-13 78.6 269 35.7
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 8.4e-13 78.6 246 36.2
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.1e-12 78.2 304 31.9
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 1.9e-12 77.4 273 34.1
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 1.9e-12 77.4 271 34.3
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 2.4e-12 77.0 122 41.0
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 3.2e-12 76.6 272 32.0
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 5.5e-12 75.9 275 34.2
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 1.2e-11 74.7 68 52.9
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.2e-11 74.7 267 31.8
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 2.7e-11 73.6 245 35.1
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 2.7e-11 73.6 276 33.7
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 3.5e-11 73.2 271 33.6
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 1.0e-10 71.6 56 64.3
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 1.3e-10 71.2 273 32.6
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 2.3e-10 70.5 268 34.7
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 2.3e-10 70.5 267 33.3
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 8.7e-10 68.6 265 30.2
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 2.5e-09 67.0 246 35.4
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 2.5e-09 67.0 271 31.4
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 1.3e-08 64.7 268 34.0
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 1.3e-08 64.7 268 34.0
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 3.7e-08 63.2 281 33.8
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 4.8e-08 62.8 207 35.7
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 6.2e-08 62.4 252 31.3
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 8.1e-08 62.0 41 68.3
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 8.1e-08 62.0 222 33.3
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 1.8e-07 60.8 260 32.3
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 2.4e-07 60.5 268 31.7
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.9e-07 58.9 62 50.0
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.9e-07 58.9 70 50.0
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.9e-07 58.9 62 50.0
TPR.G36127 Trifolium pratense HOM05D007490 ORTHO05D008750 6.9e-07 58.9 103 47.6
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 9.0e-07 58.5 251 32.3
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 9.0e-07 58.5 291 31.3
Os07g0656300 Oryza sativa ssp. japonica HOM05D022794 ORTHO05D023027 5.8e-06 55.8 66 48.5
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 7.6e-06 55.5 289 29.1
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 7.6e-06 55.5 256 31.2


User provided reference genes

Program Settings