Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M4LE0B Arachis hypogaea HOM05D007593 ORTHO05D009686 3.3e-129 465.3 277 100.0
Glyma.01G039400 Glycine max HOM05D007593 ORTHO05D009686 1.9e-81 306.6 319 58.0
Glyma.02G025300 Glycine max HOM05D007593 ORTHO05D009686 5.8e-78 295.0 319 57.7
Phvul.002G079500 Phaseolus vulgaris HOM05D007593 ORTHO05D009686 1.6e-72 276.9 302 56.6
Medtr5g037260 Medicago truncatula HOM05D007593 ORTHO05D009686 1.8e-66 256.9 329 52.3
Psat2g115200 Pisum sativum HOM05D007593 ORTHO05D009686 6.7e-66 255.0 278 57.6
Prupe.1G263900 Prunus persica HOM05D007593 ORTHO05D009686 5.9e-62 241.9 317 47.9
Thecc.02G236500 Theobroma cacao HOM05D007593 ORTHO05D009686 1.9e-60 236.9 318 47.2
QL03p066681 Quercus lobata HOM05D007593 ORTHO05D009686 7.2e-60 235.0 363 45.2
CiPaw.06G078500 Carya illinoinensis HOM05D007593 ORTHO05D009686 6.1e-59 231.9 295 50.5
Potri.008G190600 Populus trichocarpa HOM05D007593 ORTHO05D009686 1.8e-58 230.3 314 48.4
Atru.chr11.1889 Acer truncatum HOM05D007593 ORTHO05D009686 2.3e-58 229.9 310 45.8
VMungo1215G1938 Vigna mungo HOM05D007593 ORTHO05D009686 1.1e-57 227.6 264 55.7
FAN07G2090 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.5e-57 227.3 291 49.1
Lj2g0003805 Lotus japonicus HOM05D007593 ORTHO05D009686 1.5e-57 227.3 319 51.1
TWI75G0370 Tripterygium wilfordii HOM05D007593 ORTHO05D009686 3.3e-57 226.1 289 48.1
FAN12G2740 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.3e-56 224.2 296 48.3
Duzib268G1169 Durio zibethinus HOM05D007593 ORTHO05D009686 2.2e-56 223.4 319 44.2
Manes.01G193300 Manihot esculenta HOM05D007593 ORTHO05D009686 2.2e-56 223.4 313 46.6
MD13G1083000 Malus domestica HOM05D007593 ORTHO05D009686 1.1e-55 221.1 332 45.2
FAN22G1720 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.8e-55 220.3 296 47.6
FvH4_4g35470 Fragaria vesca HOM05D007593 ORTHO05D009686 2.0e-54 216.9 324 43.5
PGR102G2137 Punica granatum HOM05D007593 ORTHO05D009686 2.6e-54 216.5 291 45.0
FAN17G2874 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.1e-52 211.1 290 46.6
Ca_04684_v3 Cicer arietinum L. HOM05D007593 ORTHO05D009686 1.0e-50 204.5 167 70.1
Sabra08G0144600 Salix brachista HOM05D007593 ORTHO05D009686 1.0e-50 204.5 279 48.4
Nn3g17072 Nelumbo nucifera HOM05D007593 ORTHO05D009686 3.0e-50 203.0 318 40.9
Aqoxy3G00839 Aquilegia oxysepala HOM05D007593 ORTHO05D009686 1.1e-49 201.1 314 41.7
Hma1.2p1_0289F.1_g114430 Hydrangea macrophylla HOM05D007593 ORTHO05D009686 5.7e-49 198.7 270 46.3
AL1G21190 Arabidopsis lyrata HOM05D007593 ORTHO05D009686 9.7e-49 198.0 313 43.5
Carub.0001s0986 Capsella rubella HOM05D007593 ORTHO05D009686 1.7e-48 197.2 313 47.3
Sabra11G0071700 Salix brachista HOM05D007593 ORTHO05D009686 1.7e-48 197.2 279 47.7
Sabra11G0071900 Salix brachista HOM05D007593 ORTHO05D009686 1.7e-48 197.2 279 47.7
AUR62026494 Chenopodium quinoa HOM05D007593 ORTHO05D009686 3.7e-48 196.1 301 44.9
AT1G10417 Arabidopsis thaliana HOM05D007593 ORTHO05D009686 4.8e-48 195.7 293 48.1
PSO161G0019 Papaver somniferum HOM05D007593 ORTHO05D009686 1.4e-47 194.1 313 38.3
COL.COLO4_36239 Corchorus olitorius HOM05D007593 ORTHO05D009686 3.1e-47 193.0 270 44.4
Haze_12082 Corylus avellana HOM05D007593 ORTHO05D009686 4.1e-47 192.6 278 48.9
AUR62026300 Chenopodium quinoa HOM05D007593 ORTHO05D009686 5.3e-47 192.2 272 45.6
FAN12G3835 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.7e-45 187.2 184 58.2
Actinidia01171 Actinidia chinensis HOM05D007593 ORTHO05D009686 3.8e-45 186.0 271 44.3
Lsat_1_v5_gn_8_160680 Lactuca sativa HOM05D007593 ORTHO05D009686 5.0e-45 185.7 239 46.4
Gohir.A05G320500 Gossypium hirsutum HOM05D007593 ORTHO05D009686 6.5e-45 185.3 303 46.9
A06p07060 Brassica napus HOM05D007593 ORTHO05D009686 1.9e-44 183.7 344 38.7
Gorai.009G346400 Gossypium raimondii HOM05D007593 ORTHO05D009686 3.2e-44 183.0 356 40.7
Gohir.D05G322700 Gossypium hirsutum HOM05D007593 ORTHO05D009686 2.1e-43 180.3 356 40.4
BcaC05g24886 Brassica carinata HOM05D007593 ORTHO05D009686 3.6e-43 179.5 346 37.0
Thhalv10007877m.g Eutrema salsugineum HOM05D007593 ORTHO05D009686 4.7e-43 179.1 329 43.2
BraA06t23921Z Brassica rapa HOM05D007593 ORTHO05D009686 7.9e-43 178.3 324 38.6
BolC5t29606H Brassica oleracea HOM05D007593 ORTHO05D009686 1.8e-42 177.2 346 37.0
Sc04g0008660 Simmondsia chinensis HOM05D007593 ORTHO05D009686 3.9e-42 176.0 219 49.8
Cpa.g.sc5.302 Carica papaya HOM05D007593 ORTHO05D009686 5.2e-42 175.6 186 53.2
GSVIVG01020118001 Vitis vinifera HOM05D007593 ORTHO05D009686 5.7e-41 172.2 167 58.1
RcHm_v2.0_Chr4g0445111 Rosa chinensis HOM05D007593 ORTHO05D009686 4.8e-40 169.1 231 48.1
Ciclev10032856m.g Citrus clementina HOM05D007593 ORTHO05D009686 4.1e-39 166.0 167 55.7
C05p08550 Brassica napus HOM05D007593 ORTHO05D009686 2.6e-38 163.3 377 34.0
EL10Ac6g13115 Beta vulgaris HOM05D007593 ORTHO05D009686 2.9e-37 159.8 348 36.2
Nitab4.5_0002542g0050 Nicotiana tabacum HOM05D007593 ORTHO05D009686 2.9e-37 159.8 297 38.0
CARHR010560 Cardamine hirsuta HOM05D007593 ORTHO05D009686 6.5e-37 158.7 278 47.8
HanXRQChr12g0371131 Helianthus annuus HOM05D007593 ORTHO05D009686 2.7e-35 153.3 196 48.5
vmacro16309 Vaccinium macrocarpon HOM05D007593 ORTHO05D009686 1.0e-34 151.4 181 44.8
TAR629G1096 Trochodendron aralioides HOM05D007593 ORTHO05D009686 6.7e-34 148.7 155 58.1
TPR.G26746 Trifolium pratense HOM05D007593 ORTHO05D009686 2.0e-33 147.1 319 41.1
BcaC05g24925 Brassica carinata HOM05D007593 ORTHO05D009686 7.5e-33 145.2 339 38.6
Rhsim12G0127800 Rhododendron simsii HOM05D007593 ORTHO05D009686 3.7e-32 142.9 294 36.7
CANSAT07G0001 Cannabis sativa HOM05D007593 ORTHO05D009686 3.1e-31 139.8 370 34.1
Nitab4.5_0000791g0030 Nicotiana tabacum HOM05D007593 ORTHO05D009686 1.2e-30 137.9 281 34.9
ECA233G4970 Erigeron canadensis HOM05D007593 ORTHO05D009686 5.9e-30 135.6 331 30.2
Cc11_g13810 Coffea canephora HOM05D007593 ORTHO05D009686 1.5e-28 131.0 168 46.4
CAN.G27.56 Capsicum annuum HOM05D007593 ORTHO05D009686 1.6e-27 127.5 247 34.4
Eucgr.B03393 Eucalyptus grandis HOM05D007593 ORTHO05D009686 4.7e-27 125.9 134 48.5
BcaC05g24887 Brassica carinata HOM05D007593 ORTHO05D009686 5.4e-23 112.5 246 32.5
Lalb_Chr05g0217441 Lupinus albus HOM05D007593 ORTHO05D009686 2.0e-22 110.5 74 77.0
arahy.Tifrunner.gnm1.ann1.YHM9KM Arachis hypogaea HOM05D007593 ORTHO05D009686 1.2e-19 101.3 59 100.0
Hund25291 Selenicereus undatus HOM05D007593 ORTHO05D009686 4.9e-16 89.4 109 51.4
Lalb_Chr05g0217431 Lupinus albus HOM05D007593 ORTHO05D009686 1.1e-15 88.2 111 52.3
Zm00001eb223170 Zea mays HOM05D007593 ORTHO05D009686 2.0e-14 84.0 198 30.3
DCAR_031078 Daucus carota HOM05D007593 ORTHO05D009686 4.5e-14 82.8 177 32.2
RcHm_v2.0_Chr4g0445121 Rosa chinensis HOM05D007593 ORTHO05D009686 4.5e-14 82.8 85 51.8
Sp1g09040 Schrenkiella parvula HOM05D007593 ORTHO05D009686 2.9e-08 63.5 61 67.2
Sabra15G0067100 Salix brachista HOM05D007593 ORTHO05D009686 2.4e-07 60.5 61 65.6
CSS0023539 Camellia sinensis var. sinensis HOM05D007593 ORTHO05D009686 1.2e-06 58.2 114 53.5


User provided reference genes

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