Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M2WIVZ Arachis hypogaea HOM05D000274 ORTHO05D002552 5.0e-32 140.6 75 100.0
arahy.Tifrunner.gnm1.ann1.H8UXH3 Arachis hypogaea HOM05D000274 ORTHO05D002552 4.2e-23 110.9 106 62.3
arahy.Tifrunner.gnm1.ann1.3I6E4U Arachis hypogaea HOM05D000274 ORTHO05D002552 3.6e-22 107.8 106 63.2
arahy.Tifrunner.gnm1.ann1.JE9GG4 Arachis hypogaea HOM05D000274 ORTHO05D002552 3.6e-22 107.8 106 63.2
arahy.Tifrunner.gnm1.ann1.8S8FMR Arachis hypogaea HOM05D000274 ORTHO05D002552 3.0e-21 104.8 64 90.6
arahy.Tifrunner.gnm1.ann1.002YPW Arachis hypogaea HOM05D000274 ORTHO05D002552 8.8e-21 103.2 64 89.1
arahy.Tifrunner.gnm1.ann1.KX9QRC Arachis hypogaea HOM05D000274 ORTHO05D002552 8.8e-21 103.2 64 89.1
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 2.4e-18 95.1 61 83.6
Lalb_Chr07g0192041 Lupinus albus HOM05D000274 ORTHO05D002552 2.4e-18 95.1 61 83.6
CARHR282180 Cardamine hirsuta HOM05D000274 ORTHO05D002552 4.1e-18 94.4 61 82.0
ATCG00670 Arabidopsis thaliana HOM05D000274 ORTHO05D002552 5.3e-18 94.0 61 80.3
LjContig00318g0024179 Lotus japonicus HOM05D000274 ORTHO05D002552 5.3e-18 94.0 61 83.6
AL2G21640 Arabidopsis lyrata HOM05D000274 ORTHO05D002552 9.1e-18 93.2 61 80.3
Sc24g0000880 Simmondsia chinensis HOM05D000274 ORTHO05D002552 9.1e-18 93.2 61 80.3
Sc02g0004580 Simmondsia chinensis HOM05D000274 ORTHO05D002552 1.2e-17 92.8 61 78.7
PSO548G0031 Papaver somniferum HOM05D000274 ORTHO05D002552 1.6e-17 92.4 63 76.2
Cfa021574 Carpinus fangiana HOM05D000274 ORTHO05D002552 2.0e-17 92.0 61 78.7
BcaB02g11359 Brassica carinata HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
BcaC03g15273 Brassica carinata HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
BcaC07g42433 Brassica carinata HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
BNapus_Darmor_BZH_scaffold_287p00220 Brassica napus HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
C02p28700 Brassica napus HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
C02p43600 Brassica napus HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
C06p22930 Brassica napus HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
C06p23060 Brassica napus HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
BolSC29t60600H Brassica oleracea HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
BolSC35t60659H Brassica oleracea HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
BolSC46t61010H Brassica oleracea HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
BraSC138t45563Z Brassica rapa HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 80.3
PGR111G0023 Punica granatum HOM05D000274 ORTHO05D002552 2.6e-17 91.7 61 78.7
SabraPtG0003900 Salix brachista HOM05D000274 ORTHO05D002552 2.6e-17 91.7 62 77.4
Gohir.A05G285000 Gossypium hirsutum HOM05D000274 ORTHO05D002552 3.5e-17 91.3 61 78.7
Gohir.D01G102021 Gossypium hirsutum HOM05D000274 ORTHO05D002552 3.5e-17 91.3 61 78.7
DCAR_032510 Daucus carota HOM05D000274 ORTHO05D002552 4.5e-17 90.9 64 76.6
MBI13_g29602_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 4.5e-17 90.9 60 78.3
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 4.5e-17 90.9 60 76.7
Phvul.002G090301 Phaseolus vulgaris HOM05D000274 ORTHO05D002552 4.5e-17 90.9 61 78.7
C09p40540 Brassica napus HOM05D000274 ORTHO05D002552 7.7e-17 90.1 61 78.7
RcHm_v2.0_CPg0501991 Rosa chinensis HOM05D000274 ORTHO05D002552 7.7e-17 90.1 60 78.3
C04p42950 Brassica napus HOM05D000274 ORTHO05D002552 1.0e-16 89.7 61 78.7
BolC4t25865H Brassica oleracea HOM05D000274 ORTHO05D002552 1.0e-16 89.7 61 78.7
Gohir.D06G018300 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.0e-16 89.7 61 77.0
Gorai.009G282800 Gossypium raimondii HOM05D000274 ORTHO05D002552 1.0e-16 89.7 60 78.3
RcHm_v2.0_Chr6g0260431 Rosa chinensis HOM05D000274 ORTHO05D002552 1.0e-16 89.7 60 78.3
Gohir.A12G229201 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.3e-16 89.4 61 77.0
Sc09g0009710 Simmondsia chinensis HOM05D000274 ORTHO05D002552 1.3e-16 89.4 61 77.0
EL10Ac5g13040 Beta vulgaris HOM05D000274 ORTHO05D002552 1.7e-16 89.0 61 75.4
EL10As12g24030 Beta vulgaris HOM05D000274 ORTHO05D002552 1.7e-16 89.0 61 75.4
BraSC103t45477Z Brassica rapa HOM05D000274 ORTHO05D002552 1.7e-16 89.0 59 79.7
MBI14_g38260_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 1.7e-16 89.0 60 76.7
SalBow1G7090 Salvia bowleyana HOM05D000274 ORTHO05D002552 3.8e-16 87.8 61 75.4
MELO3C027089.2 Cucumis melo HOM05D000274 ORTHO05D002552 5.0e-16 87.4 61 73.8
Gohir.D06G113800 Gossypium hirsutum HOM05D000274 ORTHO05D002552 5.0e-16 87.4 61 75.4
Sed0002260 Sechium edule HOM05D000274 ORTHO05D002552 6.5e-16 87.0 60 76.7
Sed0002969 Sechium edule HOM05D000274 ORTHO05D002552 6.5e-16 87.0 60 76.7
Sed0019404 Sechium edule HOM05D000274 ORTHO05D002552 6.5e-16 87.0 60 76.7
Sed0022936 Sechium edule HOM05D000274 ORTHO05D002552 6.5e-16 87.0 60 76.7
Gohir.D07G185750 Gossypium hirsutum HOM05D000274 ORTHO05D002552 8.5e-16 86.7 61 75.4
Gorai.002G264000 Gossypium raimondii HOM05D000274 ORTHO05D002552 8.5e-16 86.7 60 76.7
Lalb_Chr03g0038761 Lupinus albus HOM05D000274 ORTHO05D002552 1.1e-15 86.3 61 77.0
HanXRQChr00c0314g0573521 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
HanXRQChr01g0020281 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
HanXRQChr10g0283621 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
HanXRQChr10g0284311 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
HanXRQChr10g0289321 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
HanXRQChr10g0318131 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
HanXRQChr11g0326901 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
HanXRQChr11g0345211 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
HanXRQCPg0580111 Helianthus annuus HOM05D000274 ORTHO05D002552 1.5e-15 85.9 69 69.6
ATR0303G006 Amborella trichopoda HOM05D000274 ORTHO05D002552 3.2e-15 84.7 61 75.4
CAN.G702.46 Capsicum annuum HOM05D000743 ORTHO05D000580 3.2e-15 84.7 72 62.5
HanXRQChr04g0095101 Helianthus annuus HOM05D000274 ORTHO05D002552 3.2e-15 84.7 70 67.1
Lsat_1_v5_gn_9_50981 Lactuca sativa HOM05D000274 ORTHO05D002552 3.2e-15 84.7 69 68.1
SalBow6G1627 Salvia bowleyana HOM05D000274 ORTHO05D002552 4.2e-15 84.3 61 72.1
ECA074G0006 Erigeron canadensis HOM05D000274 ORTHO05D002552 7.2e-15 83.6 69 68.1
EL10Ac1g01444 Beta vulgaris HOM05D000274 ORTHO05D002552 9.4e-15 83.2 61 72.1
Gohir.A10G134850 Gossypium hirsutum HOM05D000274 ORTHO05D002552 9.4e-15 83.2 61 68.9
Gohir.D01G217650 Gossypium hirsutum HOM05D000274 ORTHO05D002552 9.4e-15 83.2 60 75.0
Lsat_1_v5_gn_4_11460 Lactuca sativa HOM05D000274 ORTHO05D002552 9.4e-15 83.2 58 75.9
HanXRQChr04g0094301 Helianthus annuus HOM05D000274 ORTHO05D002552 1.2e-14 82.8 69 68.1
PGSC0003DMG402022617 Solanum tuberosum HOM05D000274 ORTHO05D002552 1.2e-14 82.8 62 66.1
Eucgr.I00671 Eucalyptus grandis HOM05D000274 ORTHO05D002552 1.6e-14 82.4 61 68.9
Ciclev10003424m.g Citrus clementina HOM05D000274 ORTHO05D002552 2.1e-14 82.0 61 68.9
HanXRQChr06g0177591 Helianthus annuus HOM05D000274 ORTHO05D002552 2.1e-14 82.0 70 64.3
MBI16_g04458_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 2.1e-14 82.0 60 71.7
Gohir.D06G104800 Gossypium hirsutum HOM05D000274 ORTHO05D002552 2.7e-14 81.6 61 72.1
Gorai.010G140000 Gossypium raimondii HOM05D000274 ORTHO05D002552 2.7e-14 81.6 60 73.3
MBI06_g25326_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 2.7e-14 81.6 60 71.7
Nitab4.5_0010531g0050 Nicotiana tabacum HOM05D000274 ORTHO05D002552 2.7e-14 81.6 61 68.9
MD11G1294400 Malus domestica HOM05D000274 ORTHO05D002552 3.6e-14 81.3 59 71.2
MBI18_g10796_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D002552 4.7e-14 80.9 63 69.8
Solyc00g500023.1 Solanum lycopersicum HOM05D000274 ORTHO05D002552 4.7e-14 80.9 72 56.9
HanXRQChr02g0052561 Helianthus annuus HOM05D000274 ORTHO05D002552 6.1e-14 80.5 59 76.3
Glyma.20G048700 Glycine max HOM05D000274 ORTHO05D002552 8.0e-14 80.1 54 77.8
Gorai.010G129800 Gossypium raimondii HOM05D000274 ORTHO05D002552 8.0e-14 80.1 54 77.8
EL10As15g24108 Beta vulgaris HOM05D000274 ORTHO05D002552 1.0e-13 79.7 62 66.1
CAN.G219.29 Capsicum annuum HOM05D000274 ORTHO05D002552 1.0e-13 79.7 62 67.7
CAN.G1739.8 Capsicum annuum HOM05D000274 ORTHO05D002552 1.4e-13 79.3 62 66.1
Lsat_1_v5_gn_4_118880 Lactuca sativa HOM05D000274 ORTHO05D002552 3.0e-13 78.2 69 63.8
ATR1132G067 Amborella trichopoda HOM05D000274 ORTHO05D002552 5.2e-13 77.4 59 67.8
Lsat_1_v5_gn_2_43961 Lactuca sativa HOM05D000274 ORTHO05D002552 5.2e-13 77.4 59 69.5
Medtr4g034690 Medicago truncatula HOM05D000274 ORTHO05D002552 5.2e-13 77.4 59 66.1
Medtr4g077730 Medicago truncatula HOM05D000274 ORTHO05D002552 5.2e-13 77.4 59 66.1
EL10Ac1g01196 Beta vulgaris HOM05D000274 ORTHO05D002552 6.8e-13 77.0 61 72.1
BolC7t41719H Brassica oleracea HOM05D000274 ORTHO05D002552 6.8e-13 77.0 61 68.9
Gohir.D02G116125 Gossypium hirsutum HOM05D000274 ORTHO05D002552 1.5e-12 75.9 57 68.4
Nitab4.5_0005769g0060 Nicotiana tabacum HOM05D000274 ORTHO05D002552 1.5e-12 75.9 61 65.6
Gohir.D09G093050 Gossypium hirsutum HOM05D000274 ORTHO05D002552 2.0e-12 75.5 67 65.7
Gohir.D01G169088 Gossypium hirsutum HOM05D000274 ORTHO05D002552 3.4e-12 74.7 70 60.0
COL.COLO4_02977 Corchorus olitorius HOM05D000274 ORTHO05D002552 7.5e-12 73.6 58 62.1
COL.COLO4_03028 Corchorus olitorius HOM05D000274 ORTHO05D002552 7.5e-12 73.6 58 62.1
COL.COLO4_03061 Corchorus olitorius HOM05D000274 ORTHO05D002552 7.5e-12 73.6 58 62.1
COL.COLO4_04073 Corchorus olitorius HOM05D000274 ORTHO05D002552 7.5e-12 73.6 58 62.1
Gohir.1Z050580 Gossypium hirsutum HOM05D000274 ORTHO05D002552 7.5e-12 73.6 51 74.5
Gorai.002G210500 Gossypium raimondii HOM05D000274 ORTHO05D002552 7.5e-12 73.6 59 67.8
HanXRQChr00c0557g0575781 Helianthus annuus HOM05D000274 ORTHO05D002552 1.7e-11 72.4 56 71.4
Solyc00g500070.1 Solanum lycopersicum HOM05D000274 ORTHO05D002552 1.7e-11 72.4 57 63.2
BcaC02g09867 Brassica carinata HOM05D000274 ORTHO05D002552 1.4e-10 69.3 49 73.5
C04p35750 Brassica napus HOM05D000274 ORTHO05D002552 1.4e-10 69.3 49 73.5
BolC4t25226H Brassica oleracea HOM05D000274 ORTHO05D002552 1.4e-10 69.3 49 73.5
CAN.G648.4 Capsicum annuum HOM05D000274 ORTHO05D002552 1.8e-10 68.9 59 59.3
Psat0s1446g0160 Pisum sativum HOM05D000274 ORTHO05D002552 1.8e-10 68.9 59 57.6
Psat0s7142g0080 Pisum sativum HOM05D000274 ORTHO05D002552 1.8e-10 68.9 59 57.6
SMO086G0017 Selaginella moellendorffii HOM05D000274 ORTHO05D002552 4.1e-10 67.8 60 55.0
Medtr0002s0730 Medicago truncatula HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb039170 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb255900 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb434890 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb435080 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb435150 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb435370 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb437160 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb439970 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
Zm00001eb440350 Zea mays HOM05D000274 ORTHO05D002552 9.1e-10 66.6 59 59.3
BolSC29t60479H Brassica oleracea HOM05D000274 ORTHO05D002552 2.7e-09 65.1 51 66.7
QL93p0311_0006 Quercus lobata HOM05D000274 ORTHO05D002552 5.9e-09 63.9 45 71.1
Gorai.013G004600 Gossypium raimondii HOM05D000274 ORTHO05D002552 7.7e-09 63.5 60 58.3
Hund10283 Selenicereus undatus HOM05D000274 ORTHO05D002552 2.5e-07 58.5 65 44.6
Hund27992 Selenicereus undatus HOM05D000274 ORTHO05D002552 4.2e-07 57.8 49 55.1
MBI14_g44884_MAGBIO Magnolia biondii HOM05D000537 ORTHO05D000415 1.2e-06 56.2 45 64.4
Duzib026G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib086G0003 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib124G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib125G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib162G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib185G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib225G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib252G0003 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Duzib275G0001 Durio zibethinus HOM05D000274 ORTHO05D002552 2.1e-06 55.5 53 49.1
Lsat_1_v5_gn_5_50301 Lactuca sativa HOM05D000274 ORTHO05D002552 2.7e-06 55.1 55 54.5
Hund27967 Selenicereus undatus HOM05D000274 ORTHO05D002552 2.7e-06 55.1 68 39.7
BraSC103t45453Z Brassica rapa HOM05D000274 ORTHO05D002552 8.0e-06 53.5 32 84.4


User provided reference genes

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