Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M2QILT Arachis hypogaea HOM05D007796 ORTHO05D009853 2.4e-34 148.3 75 100.0
Psat4g158920 Pisum sativum HOM05D007796 ORTHO05D009853 2.2e-19 98.6 74 70.3
TPR.G5064 Trifolium pratense HOM05D007796 ORTHO05D009853 1.2e-17 92.8 74 66.2
Ca_23572_v3 Cicer arietinum L. HOM05D007796 ORTHO05D009853 2.6e-17 91.7 67 70.1
Ca_23581_v3 Cicer arietinum L. HOM05D007796 ORTHO05D009853 2.6e-17 91.7 67 70.1
Lj3g0021991 Lotus japonicus HOM05D007796 ORTHO05D009853 1.0e-16 89.7 72 63.9
Medtr8g028085 Medicago truncatula HOM05D007796 ORTHO05D009853 5.0e-16 87.4 68 63.2
Migut.G01293 Erythranthe guttata HOM05D007796 ORTHO05D009853 1.2e-12 76.3 73 54.8
PGR083G0658 Punica granatum HOM05D007796 ORTHO05D009853 1.5e-12 75.9 55 61.8
Lalb_Chr17g0342271 Lupinus albus HOM05D007796 ORTHO05D009853 2.6e-12 75.1 72 54.2
Manes.12G058902 Manihot esculenta HOM05D007796 ORTHO05D009853 4.4e-12 74.3 72 52.8
Aa31LG5G18120 Aethionema arabicum HOM05D007796 ORTHO05D009853 5.7e-12 73.9 70 54.3
Eucgr.H00678 Eucalyptus grandis HOM05D007796 ORTHO05D009853 5.7e-12 73.9 58 58.6
Oeu022686.1 Olea europaea HOM05D007796 ORTHO05D009853 5.7e-12 73.9 55 60.0
Gohir.A07G088800 Gossypium hirsutum HOM05D007796 ORTHO05D009853 9.7e-12 73.2 72 54.2
THA.LOC104822455 Tarenaya hassleriana HOM05D007796 ORTHO05D009853 1.7e-11 72.4 71 52.1
Atru.chr6.3486 Acer truncatum HOM05D007796 ORTHO05D009853 2.8e-11 71.6 58 56.9
FvH4_4g06110 Fragaria vesca HOM05D007796 ORTHO05D009853 3.7e-11 71.2 67 58.2
FAN07G1080 Fragaria x ananassa HOM05D007796 ORTHO05D009853 3.7e-11 71.2 67 58.2
FAN12G2913 Fragaria x ananassa HOM05D007796 ORTHO05D009853 3.7e-11 71.2 67 58.2
FAN17G0402 Fragaria x ananassa HOM05D007796 ORTHO05D009853 3.7e-11 71.2 67 58.2
Gohir.D07G093800 Gossypium hirsutum HOM05D007796 ORTHO05D009853 4.8e-11 70.9 72 51.4
Gorai.001G100500 Gossypium raimondii HOM05D007796 ORTHO05D009853 4.8e-11 70.9 72 51.4
Ciclev10018341m.g Citrus clementina HOM05D007796 ORTHO05D009853 6.3e-11 70.5 56 58.9
MD16G1238500 Malus domestica HOM05D007796 ORTHO05D009853 6.3e-11 70.5 65 53.8
CSS0002213 Camellia sinensis var. sinensis HOM05D007796 ORTHO05D009853 8.3e-11 70.1 69 50.7
CSS0009025 Camellia sinensis var. sinensis HOM05D007796 ORTHO05D009853 8.3e-11 70.1 69 50.7
Nn7g37568 Nelumbo nucifera HOM05D007796 ORTHO05D009853 8.3e-11 70.1 55 58.2
Thecc.01G204800 Theobroma cacao HOM05D007796 ORTHO05D009853 1.1e-10 69.7 72 52.8
Cpa.g.sc8.20 Carica papaya HOM05D007796 ORTHO05D009853 1.8e-10 68.9 71 49.3
MD13G1233500 Malus domestica HOM05D007796 ORTHO05D009853 1.8e-10 68.9 65 52.3
CANSAT35G1173 Cannabis sativa HOM05D007796 ORTHO05D009853 2.4e-10 68.6 55 56.4
CARHR082260 Cardamine hirsuta HOM05D007796 ORTHO05D009853 2.4e-10 68.6 71 49.3
Hma1.2p1_0487F.1_g163590 Hydrangea macrophylla HOM05D007796 ORTHO05D009853 3.1e-10 68.2 55 58.2
Lsat_1_v5_gn_2_38801 Lactuca sativa HOM05D007796 ORTHO05D009853 3.1e-10 68.2 57 54.4
Rhsim09G0019400 Rhododendron simsii HOM05D007796 ORTHO05D009853 3.1e-10 68.2 54 53.7
RcHm_v2.0_Chr4g0397691 Rosa chinensis HOM05D007796 ORTHO05D009853 3.1e-10 68.2 67 55.2
TWI36G1414 Tripterygium wilfordii HOM05D007796 ORTHO05D009853 3.1e-10 68.2 64 48.4
vmacro00674 Vaccinium macrocarpon HOM05D007796 ORTHO05D009853 3.1e-10 68.2 65 49.2
Nitab4.5_0000242g0120 Nicotiana tabacum HOM05D007796 ORTHO05D009853 4.1e-10 67.8 69 50.7
Rhsim09G0019700 Rhododendron simsii HOM05D007796 ORTHO05D009853 4.1e-10 67.8 70 45.7
AL3G18920 Arabidopsis lyrata HOM05D007796 ORTHO05D009853 7.0e-10 67.0 71 47.9
FAN22G0383 Fragaria x ananassa HOM05D007796 ORTHO05D009853 7.0e-10 67.0 56 60.7
A05p40630 Brassica napus HOM05D007796 ORTHO05D009853 9.1e-10 66.6 74 45.9
BraA05t22794Z Brassica rapa HOM05D007796 ORTHO05D009853 9.1e-10 66.6 74 45.9
Prupe.1G064700 Prunus persica HOM05D007796 ORTHO05D009853 9.1e-10 66.6 58 56.9
Nitab4.5_0001521g0060 Nicotiana tabacum HOM05D007796 ORTHO05D009853 1.2e-09 66.2 65 52.3
MELO3C012717.2 Cucumis melo HOM05D007796 ORTHO05D009853 1.6e-09 65.9 71 47.9
CsaV3_7G027090 Cucumis sativus L. HOM05D007796 ORTHO05D009853 1.6e-09 65.9 70 52.9
Thhalv10021850m.g Eutrema salsugineum HOM05D007796 ORTHO05D009853 1.6e-09 65.9 71 47.9
Sp3g06500 Schrenkiella parvula HOM05D007796 ORTHO05D009853 1.6e-09 65.9 70 47.1
AT3G07568 Arabidopsis thaliana HOM05D007796 ORTHO05D009853 2.0e-09 65.5 71 46.5
C05p59740 Brassica napus HOM05D007796 ORTHO05D009853 2.0e-09 65.5 70 45.7
Manes.13G057800 Manihot esculenta HOM05D007796 ORTHO05D009853 2.7e-09 65.1 72 45.8
Rhsim09G0018700 Rhododendron simsii HOM05D007796 ORTHO05D009853 2.7e-09 65.1 54 51.9
SalBow2G2954 Salvia bowleyana HOM05D007796 ORTHO05D009853 2.7e-09 65.1 55 54.5
Actinidia27090 Actinidia chinensis HOM05D007796 ORTHO05D009853 3.5e-09 64.7 54 57.4
Carub.0003s0713 Capsella rubella HOM05D007796 ORTHO05D009853 3.5e-09 64.7 71 43.7
QL09p048026 Quercus lobata HOM05D007796 ORTHO05D009853 3.5e-09 64.7 68 52.9
Nitab4.5_0012444g0010 Nicotiana tabacum HOM05D007796 ORTHO05D009853 4.5e-09 64.3 54 55.6
MSTRG.9748 Avicennia marina HOM05D007796 ORTHO05D009853 5.9e-09 63.9 69 49.3
COL.COLO4_04515 Corchorus olitorius HOM05D007796 ORTHO05D009853 5.9e-09 63.9 72 48.6
BcaC05g29552 Brassica carinata HOM05D000328 ORTHO05D000191 7.7e-09 63.5 70 44.3
BolC5t34628H Brassica oleracea HOM05D007796 ORTHO05D009853 7.7e-09 63.5 70 44.3
Glyma.07G059400 Glycine max HOM05D007796 ORTHO05D009853 7.7e-09 63.5 74 48.6
Peaxi162Scf00075g01546 Petunia axillaris HOM05D007796 ORTHO05D009853 7.7e-09 63.5 73 47.9
unitig_0.g2392 Utricularia gibba HOM05D007796 ORTHO05D009853 2.9e-08 61.6 55 49.1
Sopen08g004900 Solanum pennellii HOM05D007796 ORTHO05D009853 3.8e-08 61.2 56 51.8
Phvul.010G110050 Phaseolus vulgaris HOM05D007796 ORTHO05D009853 5.0e-08 60.8 75 46.7
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 6.5e-08 60.5 65 46.2
Haze_03600 Corylus avellana HOM05D007796 ORTHO05D009853 8.5e-08 60.1 63 47.6
CiPaw.13G057300 Carya illinoinensis HOM05D007796 ORTHO05D009853 1.1e-07 59.7 54 53.7
PSO017G5834 Papaver somniferum HOM05D007796 ORTHO05D009853 1.5e-07 59.3 55 52.7
Potri.014G197400 Populus trichocarpa HOM05D007796 ORTHO05D009853 2.5e-07 58.5 68 45.6
DCAR_005469 Daucus carota HOM05D007796 ORTHO05D009853 4.2e-07 57.8 54 50.0
ATR0743G114 Amborella trichopoda HOM05D007796 ORTHO05D009853 7.2e-07 57.0 72 44.4
HanXRQChr12g0382011 Helianthus annuus HOM05D007796 ORTHO05D009853 7.2e-07 57.0 53 43.4
Glyma.16G028300 Glycine max HOM05D007796 ORTHO05D009853 1.2e-06 56.2 62 45.2
Sed0024779 Sechium edule HOM05D007796 ORTHO05D009853 2.1e-06 55.5 59 47.5
Phvul.010G110100 Phaseolus vulgaris HOM05D007796 ORTHO05D009853 3.6e-06 54.7 56 50.0
GSVIVG01004106001 Vitis vinifera HOM05D007796 ORTHO05D009853 4.7e-06 54.3 73 42.5
MBI07_g07943_MAGBIO Magnolia biondii HOM05D007796 ORTHO05D009853 6.1e-06 53.9 76 38.2


User provided reference genes

Program Settings