Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M2NLAU Arachis hypogaea HOM05D000326 ORTHO05D003748 5.8e-43 177.2 91 100.0
arahy.Tifrunner.gnm1.ann1.JK8JKR Arachis hypogaea HOM05D002759 ORTHO05D003290 1.1e-14 83.2 68 66.2
arahy.Tifrunner.gnm1.ann1.1L9BHC Arachis hypogaea HOM05D000326 ORTHO05D003748 2.2e-13 79.0 40 97.5
arahy.Tifrunner.gnm1.ann1.GK2FLE Arachis hypogaea HOM05D000326 ORTHO05D003748 2.2e-13 79.0 40 97.5
arahy.Tifrunner.gnm1.ann1.65VZXH Arachis hypogaea HOM05D007334 ORTHO05D011873 3.7e-13 78.2 39 100.0
arahy.Tifrunner.gnm1.ann1.P5DNC9 Arachis hypogaea HOM05D000326 ORTHO05D003748 6.3e-13 77.4 46 84.8
arahy.Tifrunner.gnm1.ann1.H48B83 Arachis hypogaea HOM05D000326 ORTHO05D003748 8.2e-13 77.0 39 97.4
arahy.Tifrunner.gnm1.ann1.BKNL7R Arachis hypogaea HOM05D000326 ORTHO05D003748 2.4e-12 75.5 41 92.7
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 2.4e-12 75.5 39 94.9
arahy.Tifrunner.gnm1.ann1.N5JFEK Arachis hypogaea HOM05D000326 ORTHO05D003748 3.1e-12 75.1 39 94.9
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 4.1e-12 74.7 39 94.9
arahy.Tifrunner.gnm1.ann1.VC0084 Arachis hypogaea HOM05D000326 ORTHO05D003748 6.9e-12 73.9 76 59.2
arahy.Tifrunner.gnm1.ann1.FSX0YI Arachis hypogaea HOM05D000326 ORTHO05D084195 1.2e-11 73.2 39 89.7
arahy.Tifrunner.gnm1.ann1.ZDA2WA Arachis hypogaea HOM05D000326 ORTHO05D003748 1.5e-11 72.8 39 89.7
arahy.Tifrunner.gnm1.ann1.8Y6H0Q Arachis hypogaea HOM05D000326 ORTHO05D003748 1.7e-10 69.3 39 87.2
arahy.Tifrunner.gnm1.ann1.TZJ8UV Arachis hypogaea HOM05D000326 ORTHO05D003748 2.2e-10 68.9 38 89.5
arahy.Tifrunner.gnm1.ann1.7LZ8H1 Arachis hypogaea HOM05D000326 ORTHO05D003748 2.9e-10 68.6 39 84.6
Ca_21053_v3 Cicer arietinum L. HOM05D000326 ORTHO05D003748 2.9e-10 68.6 40 82.5
Phvul.003G082700 Phaseolus vulgaris HOM05D000326 ORTHO05D003748 2.9e-10 68.6 40 82.5
Lj6g0028133 Lotus japonicus HOM05D000182 ORTHO05D003748 3.8e-10 68.2 40 85.0
Eucgr.E03957 Eucalyptus grandis HOM05D000326 ORTHO05D003748 8.5e-10 67.0 40 82.5
Glyma.15G113300 Glycine max HOM05D000182 ORTHO05D003748 1.4e-09 66.2 40 82.5
Lj4g0020890 Lotus japonicus HOM05D000326 ORTHO05D003748 1.9e-09 65.9 40 80.0
SGA_v2.0_scaffold89G27492 Striga asiatica HOM05D000326 ORTHO05D003748 2.5e-09 65.5 71 50.7
VMungo1215G0871 Vigna mungo HOM05D000326 ORTHO05D003748 3.2e-09 65.1 40 80.0
Glyma.09G008900 Glycine max HOM05D000182 ORTHO05D003748 4.2e-09 64.7 40 80.0
Psat4g003600 Pisum sativum HOM05D000326 ORTHO05D003748 4.2e-09 64.7 40 77.5
COL.COLO4_31858 Corchorus olitorius HOM05D000326 ORTHO05D003748 9.4e-09 63.5 40 72.5
QL05p069871 Quercus lobata HOM05D000326 ORTHO05D003748 1.2e-08 63.2 39 74.4
TPR.G37042 Trifolium pratense HOM05D000326 ORTHO05D003748 1.2e-08 63.2 40 75.0
arahy.Tifrunner.gnm1.ann1.JST4VX Arachis hypogaea HOM05D000326 ORTHO05D003748 2.1e-08 62.4 48 68.8
FvH4_3g01160 Fragaria vesca HOM05D000326 ORTHO05D003748 2.1e-08 62.4 39 74.4
Phvul.006G144400 Phaseolus vulgaris HOM05D000182 ORTHO05D003748 2.1e-08 62.4 40 75.0
DCAR_004868 Daucus carota HOM05D000326 ORTHO05D003748 2.7e-08 62.0 39 74.4
Dinv07384 Davidia involucrata HOM05D000326 ORTHO05D003748 2.7e-08 62.0 39 74.4
MD05G1355400 Malus domestica HOM05D000326 ORTHO05D003748 2.7e-08 62.0 40 70.0
MD05G1355800 Malus domestica HOM05D000326 ORTHO05D003748 2.7e-08 62.0 40 70.0
Potri.011G022500 Populus trichocarpa HOM05D000326 ORTHO05D003748 2.7e-08 62.0 40 72.5
QL03p008385 Quercus lobata HOM05D000326 ORTHO05D003748 2.7e-08 62.0 39 74.4
QL05p069860 Quercus lobata HOM05D000326 ORTHO05D003748 2.7e-08 62.0 39 74.4
QL10p003421 Quercus lobata HOM05D000326 ORTHO05D003748 2.7e-08 62.0 39 74.4
TAR626G1478 Trochodendron aralioides HOM05D000326 ORTHO05D003748 2.7e-08 62.0 40 72.5
MELO3C021704.2 Cucumis melo HOM05D000326 ORTHO05D003748 3.6e-08 61.6 58 53.4
CsaV3_1G045840 Cucumis sativus L. HOM05D000326 ORTHO05D003748 3.6e-08 61.6 58 53.4
Duzib235G0859 Durio zibethinus HOM05D000182 ORTHO05D003748 3.6e-08 61.6 40 70.0
Medtr4g132850 Medicago truncatula HOM05D000326 ORTHO05D003748 3.6e-08 61.6 40 75.0
QL03p008379 Quercus lobata HOM05D000326 ORTHO05D003748 3.6e-08 61.6 39 71.8
Rhsim02G0104400 Rhododendron simsii HOM05D000326 ORTHO05D003748 3.6e-08 61.6 39 74.4
vmacro23325 Vaccinium macrocarpon HOM05D000326 ORTHO05D003748 3.6e-08 61.6 39 74.4
Atru.chr1.2493 Acer truncatum HOM05D000326 ORTHO05D003748 4.7e-08 61.2 40 70.0
arahy.Tifrunner.gnm1.ann1.5KTK5R Arachis hypogaea HOM05D000182 ORTHO05D003748 4.7e-08 61.2 40 75.0
arahy.Tifrunner.gnm1.ann1.C9QTWM Arachis hypogaea HOM05D000182 ORTHO05D003748 4.7e-08 61.2 40 75.0
ClCG01G009940 Citrullus lanatus HOM05D000326 ORTHO05D003748 4.7e-08 61.2 40 67.5
DCAR_030879 Daucus carota HOM05D000182 ORTHO05D003748 4.7e-08 61.2 39 74.4
Glyma.17G009400 Glycine max HOM05D000326 ORTHO05D003748 6.1e-08 60.8 40 72.5
HanXRQChr15g0470861 Helianthus annuus HOM05D000326 ORTHO05D003748 6.1e-08 60.8 40 70.0
QL03p008407 Quercus lobata HOM05D000326 ORTHO05D003748 6.1e-08 60.8 40 70.0
QL05p069854 Quercus lobata HOM05D000182 ORTHO05D003748 6.1e-08 60.8 40 70.0
QL10p003427 Quercus lobata HOM05D000182 ORTHO05D003748 6.1e-08 60.8 40 70.0
Thecc.06G231100 Theobroma cacao HOM05D000326 ORTHO05D003748 6.1e-08 60.8 40 70.0
DCAR_002211 Daucus carota HOM05D000326 ORTHO05D003748 7.9e-08 60.5 40 67.5
Oeu002754.1 Olea europaea HOM05D000326 ORTHO05D003748 7.9e-08 60.5 40 70.0
Sed0028075 Sechium edule HOM05D000326 ORTHO05D003748 7.9e-08 60.5 40 65.0
CANSAT56G1453 Cannabis sativa HOM05D000326 ORTHO05D003748 1.0e-07 60.1 40 67.5
CAN.G1263.7 Capsicum annuum HOM05D000326 ORTHO05D003748 1.0e-07 60.1 40 72.5
Cfa000128 Carpinus fangiana HOM05D000182 ORTHO05D003748 1.0e-07 60.1 40 67.5
Cc09_g01030 Coffea canephora HOM05D000326 ORTHO05D003748 1.0e-07 60.1 39 74.4
FAN25G3275 Fragaria x ananassa HOM05D000326 ORTHO05D003748 1.0e-07 60.1 39 71.8
TWI38G0552 Tripterygium wilfordii HOM05D000326 ORTHO05D003748 1.0e-07 60.1 40 67.5
CANSAT56G0281 Cannabis sativa HOM05D000326 ORTHO05D003748 1.4e-07 59.7 40 67.5
Glyma.02G116900 Glycine max HOM05D000326 ORTHO05D003748 1.4e-07 59.7 40 72.5
Gohir.D05G176700 Gossypium hirsutum HOM05D000326 ORTHO05D003748 1.4e-07 59.7 40 70.0
Gorai.009G182100 Gossypium raimondii HOM05D000326 ORTHO05D003748 1.4e-07 59.7 40 70.0
Lsat_1_v5_gn_0_39500 Lactuca sativa HOM05D000326 ORTHO05D003748 1.4e-07 59.7 40 70.0
CANSAT56G0392 Cannabis sativa HOM05D000182 ORTHO05D003748 1.8e-07 59.3 40 67.5
Lalb_Chr07g0177031 Lupinus albus HOM05D000326 ORTHO05D003748 1.8e-07 59.3 40 70.0
MD10G1329100 Malus domestica HOM05D000326 ORTHO05D003748 1.8e-07 59.3 40 67.5
Rhsim02G0104500 Rhododendron simsii HOM05D000326 ORTHO05D003748 1.8e-07 59.3 39 71.8
Solyc04g014670.3 Solanum lycopersicum HOM05D000326 ORTHO05D003748 1.8e-07 59.3 40 72.5
Sopen04g006770 Solanum pennellii HOM05D000326 ORTHO05D003748 1.8e-07 59.3 40 72.5
MSTRG.14619 Avicennia marina HOM05D000326 ORTHO05D003748 2.3e-07 58.9 39 69.2
EL10Ac8g20162 Beta vulgaris HOM05D000326 ORTHO05D003748 2.3e-07 58.9 40 67.5
Duzib235G0545 Durio zibethinus HOM05D000326 ORTHO05D003748 2.3e-07 58.9 40 67.5
Gohir.A05G173700 Gossypium hirsutum HOM05D000326 ORTHO05D003748 2.3e-07 58.9 40 67.5
Manes.16G001800 Manihot esculenta HOM05D000326 ORTHO05D003748 2.3e-07 58.9 39 66.7
Potri.011G022400 Populus trichocarpa HOM05D000326 ORTHO05D003748 2.3e-07 58.9 40 65.0
Sc17g0007650 Simmondsia chinensis HOM05D000326 ORTHO05D003748 2.3e-07 58.9 40 67.5
Migut.H01598 Erythranthe guttata HOM05D000326 ORTHO05D003748 3.0e-07 58.5 40 65.0
Gohir.D10G009900 Gossypium hirsutum HOM05D000326 ORTHO05D003748 3.0e-07 58.5 40 67.5
HanXRQChr10g0282041 Helianthus annuus HOM05D000326 ORTHO05D003748 3.0e-07 58.5 40 67.5
Sabra11G0013700 Salix brachista HOM05D000182 ORTHO05D003748 3.0e-07 58.5 40 67.5
CANSAT56G0433 Cannabis sativa HOM05D000326 ORTHO05D003748 3.9e-07 58.2 40 65.0
CAN.G1186.14 Capsicum annuum HOM05D000182 ORTHO05D003748 3.9e-07 58.2 40 65.0
Haze_06896 Corylus avellana HOM05D000182 ORTHO05D003748 3.9e-07 58.2 40 65.0
Duzib192G0921 Durio zibethinus HOM05D000326 ORTHO05D003748 3.9e-07 58.2 40 67.5
Gohir.A10G010200 Gossypium hirsutum HOM05D000326 ORTHO05D003748 3.9e-07 58.2 40 67.5
Hma1.2p1_0660F.1_g197520 Hydrangea macrophylla HOM05D000326 ORTHO05D003748 3.9e-07 58.2 40 67.5
CiPaw.10G076300 Carya illinoinensis HOM05D000182 ORTHO05D003748 5.1e-07 57.8 40 65.0
Gohir.A10G010100 Gossypium hirsutum HOM05D000326 ORTHO05D003748 5.1e-07 57.8 40 67.5
Gohir.D10G009800 Gossypium hirsutum HOM05D000326 ORTHO05D003748 5.1e-07 57.8 40 67.5
Gorai.011G010700 Gossypium raimondii HOM05D000326 ORTHO05D003748 5.1e-07 57.8 40 67.5
Gorai.011G010800 Gossypium raimondii HOM05D000326 ORTHO05D003748 5.1e-07 57.8 40 67.5
Lj1A1238T58 Lonicera japonica HOM05D000326 ORTHO05D003748 5.1e-07 57.8 40 65.0
PSO210G3324 Papaver somniferum HOM05D000326 ORTHO05D003748 5.1e-07 57.8 40 65.0
SalBow1G6431 Salvia bowleyana HOM05D000326 ORTHO05D003748 5.1e-07 57.8 39 69.2
BcaC04g21261 Brassica carinata HOM05D000326 ORTHO05D003748 6.7e-07 57.4 39 64.1
C09p33720 Brassica napus HOM05D000326 ORTHO05D003748 6.7e-07 57.4 39 64.1
BolC9t56206H Brassica oleracea HOM05D000326 ORTHO05D003748 6.7e-07 57.4 39 64.1
Ciclev10016358m.g Citrus clementina HOM05D000326 ORTHO05D003748 6.7e-07 57.4 40 60.0
ECA248G1340 Erigeron canadensis HOM05D000326 ORTHO05D003748 6.7e-07 57.4 40 67.5
Lsat_1_v5_gn_7_14601 Lactuca sativa HOM05D000326 ORTHO05D003748 6.7e-07 57.4 40 65.0
Manes.09G026500 Manihot esculenta HOM05D000326 ORTHO05D003748 6.7e-07 57.4 40 62.5
Nn1g03354 Nelumbo nucifera HOM05D000326 ORTHO05D003748 6.7e-07 57.4 38 68.4
Peaxi162Scf00442g00526 Petunia axillaris HOM05D000326 ORTHO05D003748 6.7e-07 57.4 40 67.5
TAR624G0942 Trochodendron aralioides HOM05D000326 ORTHO05D003748 6.7e-07 57.4 39 69.2
Aqoxy1G04159 Aquilegia oxysepala HOM05D000326 ORTHO05D003748 8.8e-07 57.0 40 62.5
EL10Ac8g20163 Beta vulgaris HOM05D000326 ORTHO05D003748 8.8e-07 57.0 40 60.0
CARHR253480 Cardamine hirsuta HOM05D000326 ORTHO05D003748 8.8e-07 57.0 39 61.5
Thhalv10028901m.g Eutrema salsugineum HOM05D000326 ORTHO05D003748 8.8e-07 57.0 40 60.0
PSO017G5127 Papaver somniferum HOM05D000326 ORTHO05D003748 8.8e-07 57.0 40 65.0
PSO675G4503 Papaver somniferum HOM05D000326 ORTHO05D003748 8.8e-07 57.0 40 65.0
PGR004G1603 Punica granatum HOM05D000326 ORTHO05D003748 8.8e-07 57.0 40 62.5
RcHm_v2.0_Chr5g0001721 Rosa chinensis HOM05D000326 ORTHO05D003748 8.8e-07 57.0 40 65.0
ATR1128G081 Amborella trichopoda HOM05D000326 ORTHO05D003748 1.1e-06 56.6 40 67.5
CSS0023135 Camellia sinensis var. sinensis HOM05D000326 ORTHO05D003748 1.1e-06 56.6 40 62.5
PGSC0003DMG400013266 Solanum tuberosum HOM05D000182 ORTHO05D003748 1.1e-06 56.6 40 65.0
Thecc.06G231000 Theobroma cacao HOM05D000326 ORTHO05D003748 1.1e-06 56.6 40 65.0
HPP92_003052 Vanilla planifolia HOM05D000326 ORTHO05D003748 1.1e-06 56.6 39 61.5
BcaB01g01773 Brassica carinata HOM05D000326 ORTHO05D003748 1.5e-06 56.2 39 61.5
BraA09t38233Z Brassica rapa HOM05D000326 ORTHO05D003748 1.5e-06 56.2 39 61.5
Peaxi162Scf00990g00125 Petunia axillaris HOM05D000182 ORTHO05D003748 1.5e-06 56.2 40 65.0
Prupe.4G012900 Prunus persica HOM05D000326 ORTHO05D003748 1.5e-06 56.2 40 62.5
SalBow1G6402 Salvia bowleyana HOM05D000326 ORTHO05D003748 1.5e-06 56.2 39 66.7
Cc04_g03920 Coffea canephora HOM05D000326 ORTHO05D003748 2.0e-06 55.8 39 69.2
HanXRQChr01g0006611 Helianthus annuus HOM05D000326 ORTHO05D003748 2.0e-06 55.8 40 65.0
Nitab4.5_0001198g0220 Nicotiana tabacum HOM05D000326 ORTHO05D003748 2.0e-06 55.8 40 65.0
Hund23413 Selenicereus undatus HOM05D000326 ORTHO05D003748 2.0e-06 55.8 40 62.5
A09p26600 Brassica napus HOM05D000326 ORTHO05D003748 2.6e-06 55.5 39 61.5
COL.COLO4_31856 Corchorus olitorius HOM05D000326 ORTHO05D003748 2.6e-06 55.5 41 65.9
Nitab4.5_0000143g0480 Nicotiana tabacum HOM05D000182 ORTHO05D003748 2.6e-06 55.5 40 65.0
Oeu007162.2 Olea europaea HOM05D000326 ORTHO05D003748 2.6e-06 55.5 40 60.0
Ah.14g087770 Amaranthus hybridus HOM05D000326 ORTHO05D003748 3.3e-06 55.1 40 62.5
Carub.0006s3199 Capsella rubella HOM05D000326 ORTHO05D003748 3.3e-06 55.1 39 59.0
Peaxi162Scf00558g00111 Petunia axillaris HOM05D000326 ORTHO05D003748 3.3e-06 55.1 40 62.5
Sabra11G0013500 Salix brachista HOM05D000326 ORTHO05D003748 3.3e-06 55.1 40 62.5
Sabra11G0013600 Salix brachista HOM05D000326 ORTHO05D003748 3.3e-06 55.1 40 62.5
Sp6g04810 Schrenkiella parvula HOM05D000326 ORTHO05D003748 4.4e-06 54.7 39 59.0
THA.LOC104813498 Tarenaya hassleriana HOM05D000326 ORTHO05D003748 4.4e-06 54.7 39 61.5
CDE04G1138 Ceratophyllum demersum HOM05D000326 ORTHO05D003748 5.7e-06 54.3 40 60.0
AUR62012777 Chenopodium quinoa HOM05D000326 ORTHO05D003748 5.7e-06 54.3 40 60.0
ECA248G0644 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-06 54.3 40 65.0
AUR62021879 Chenopodium quinoa HOM05D000326 ORTHO05D003748 7.4e-06 53.9 40 60.0
Nitab4.5_0008006g0010 Nicotiana tabacum HOM05D000182 ORTHO05D003748 7.4e-06 53.9 40 62.5


User provided reference genes

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