Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M1HUIQ Arachis hypogaea HOM05D005470 ORTHO05D006855 2.0e-65 252.3 130 100.0
arahy.Tifrunner.gnm1.ann1.K5YBAW Arachis hypogaea HOM05D005470 ORTHO05D006855 4.1e-42 174.9 117 82.9
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea HOM05D005470 ORTHO05D006855 5.8e-36 154.5 125 70.4
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea HOM05D005470 ORTHO05D006855 7.5e-36 154.1 126 71.4
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea HOM05D005470 ORTHO05D006855 7.5e-36 154.1 126 71.4
Phvul.007G209400 Phaseolus vulgaris HOM05D005470 ORTHO05D006855 9.5e-31 137.1 126 63.5
Glyma.18G172500 Glycine max HOM05D005470 ORTHO05D006855 2.1e-30 136.0 126 62.7
VMungo0516G0001 Vigna mungo HOM05D005470 ORTHO05D006855 6.2e-30 134.4 126 61.9
Ca_07533_v3 Cicer arietinum L. HOM05D005470 ORTHO05D006855 3.1e-29 132.1 121 64.5
Lj1g0018515 Lotus japonicus HOM05D005470 ORTHO05D006855 2.2e-27 125.9 121 60.3
Medtr7g058920 Medicago truncatula HOM05D005470 ORTHO05D006855 2.2e-27 125.9 121 61.2
Psat3g144240 Pisum sativum HOM05D005470 ORTHO05D006855 2.9e-27 125.6 121 62.8
TPR.G15281 Trifolium pratense HOM05D005470 ORTHO05D006855 3.7e-27 125.2 121 62.8
Lalb_Chr19g0125551 Lupinus albus HOM05D005470 ORTHO05D006855 9.2e-26 120.6 120 60.0
Actinidia37584 Actinidia chinensis HOM05D005470 ORTHO05D006855 1.6e-25 119.8 121 57.9
Gohir.A07G156000 Gossypium hirsutum HOM05D005470 ORTHO05D006855 1.6e-25 119.8 121 57.9
Gohir.D07G162300 Gossypium hirsutum HOM05D005470 ORTHO05D006855 1.6e-25 119.8 121 57.9
Gorai.001G185900 Gossypium raimondii HOM05D005470 ORTHO05D006855 1.6e-25 119.8 121 57.9
QL03p049466 Quercus lobata HOM05D005470 ORTHO05D006855 4.6e-25 118.2 121 57.9
Manes.12G042650 Manihot esculenta HOM05D005470 ORTHO05D006855 6.0e-25 117.9 121 57.9
Dinv04663 Davidia involucrata HOM05D005470 ORTHO05D006855 1.0e-24 117.1 121 57.9
Haze_24781 Corylus avellana HOM05D005470 ORTHO05D006855 1.7e-24 116.3 121 57.0
Thecc.01G227800 Theobroma cacao HOM05D005470 ORTHO05D006855 3.0e-24 115.5 121 56.2
Duzib211G0062 Durio zibethinus HOM05D005470 ORTHO05D006855 3.9e-24 115.2 121 56.2
RcHm_v2.0_Chr6g0285101 Rosa chinensis HOM05D005470 ORTHO05D006855 3.9e-24 115.2 121 55.4
Sabra02G0183400 Salix brachista HOM05D005470 ORTHO05D006855 3.9e-24 115.2 121 56.2
DCAR_018553 Daucus carota HOM05D005470 ORTHO05D006855 5.1e-24 114.8 121 56.2
EL10Ac7g17787 Beta vulgaris HOM05D005470 ORTHO05D006855 8.6e-24 114.0 121 53.7
CiPaw.04G106400 Carya illinoinensis HOM05D005470 ORTHO05D006855 1.1e-23 113.6 121 55.4
AUR62008875 Chenopodium quinoa HOM05D005470 ORTHO05D006855 1.9e-23 112.8 121 57.0
ClCG07G001860 Citrullus lanatus HOM05D005470 ORTHO05D006855 1.9e-23 112.8 121 57.0
Atru.chr5.1498 Acer truncatum HOM05D005470 ORTHO05D006855 2.5e-23 112.5 121 54.5
MD10G1166100 Malus domestica HOM05D005470 ORTHO05D006855 2.5e-23 112.5 121 53.7
Nn3g19926 Nelumbo nucifera HOM05D005470 ORTHO05D006855 2.5e-23 112.5 121 55.4
FvH4_2g19300 Fragaria vesca HOM05D005470 ORTHO05D006855 3.3e-23 112.1 120 55.8
FAN24G1307 Fragaria x ananassa HOM05D005470 ORTHO05D006855 3.3e-23 112.1 120 55.8
Lj2A1133T34 Lonicera japonica HOM05D005470 ORTHO05D006855 3.3e-23 112.1 121 54.5
Potri.002G240800 Populus trichocarpa HOM05D005470 ORTHO05D006855 3.3e-23 112.1 121 54.5
TAR365G1033 Trochodendron aralioides HOM05D005470 ORTHO05D006855 3.3e-23 112.1 121 57.0
PGR083G1301 Punica granatum HOM05D005470 ORTHO05D006855 4.3e-23 111.7 121 55.4
Eucgr.H00804 Eucalyptus grandis HOM05D005470 ORTHO05D006855 5.6e-23 111.3 121 54.5
Hund18358 Selenicereus undatus HOM05D005470 ORTHO05D006855 7.3e-23 110.9 121 53.7
vmacro02749 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 7.3e-23 110.9 120 55.0
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 9.5e-23 110.5 121 56.2
Cc01_g17220 Coffea canephora HOM05D005470 ORTHO05D006855 1.2e-22 110.2 121 54.5
Nitab4.5_0000866g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 1.2e-22 110.2 121 55.4
PSO478G2025 Papaver somniferum HOM05D005470 ORTHO05D006855 1.2e-22 110.2 121 55.4
Ah.08g214020 Amaranthus hybridus HOM05D005470 ORTHO05D006855 1.6e-22 109.8 120 54.2
AUR62031834 Chenopodium quinoa HOM05D005470 ORTHO05D006855 1.6e-22 109.8 120 56.7
Sp2g19240 Schrenkiella parvula HOM05D005470 ORTHO05D006855 1.6e-22 109.8 122 57.4
CSS0013378 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 2.1e-22 109.4 121 52.9
CAN.G1273.33 Capsicum annuum HOM05D005470 ORTHO05D006855 2.8e-22 109.0 121 53.7
Aa31sc866G40 Aethionema arabicum HOM05D005470 ORTHO05D006855 3.6e-22 108.6 121 54.5
Nitab4.5_0000866g0080 Nicotiana tabacum HOM05D005470 ORTHO05D006855 3.6e-22 108.6 121 52.9
THA.LOC104802678 Tarenaya hassleriana HOM05D005470 ORTHO05D006855 3.6e-22 108.6 121 55.4
Oeu015466.1 Olea europaea HOM05D005470 ORTHO05D006855 4.7e-22 108.2 121 53.7
PSO017G3643 Papaver somniferum HOM05D005470 ORTHO05D006855 4.7e-22 108.2 121 54.5
Nitab4.5_0003790g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 8.1e-22 107.5 121 52.1
Sed0016487 Sechium edule HOM05D005470 ORTHO05D006855 8.1e-22 107.5 121 57.0
Aqoxy2G03764 Aquilegia oxysepala HOM05D005470 ORTHO05D006855 1.4e-21 106.7 121 55.4
CDE01G0096 Ceratophyllum demersum HOM05D005470 ORTHO05D006855 1.4e-21 106.7 121 52.1
CsaV3_3G028840 Cucumis sativus L. HOM05D005470 ORTHO05D006855 1.4e-21 106.7 121 53.7
CsaV3_6G036910 Cucumis sativus L. HOM05D005470 ORTHO05D006855 1.4e-21 106.7 121 53.7
Sc17g0002580 Simmondsia chinensis HOM05D005470 ORTHO05D006855 1.4e-21 106.7 121 52.9
Os03g0851800 Oryza sativa ssp. japonica HOM05D005470 ORTHO05D006855 1.8e-21 106.3 121 53.7
Sopen09g024670 Solanum pennellii HOM05D005470 ORTHO05D006855 1.8e-21 106.3 121 51.2
PGSC0003DMG400002375 Solanum tuberosum HOM05D005470 ORTHO05D006855 1.8e-21 106.3 120 52.5
Solyc09g061680.3 Solanum lycopersicum HOM05D005470 ORTHO05D006855 2.4e-21 105.9 121 52.1
GSVIVG01028578001 Vitis vinifera HOM05D005470 ORTHO05D006855 2.4e-21 105.9 121 54.5
MELO3C026704.2 Cucumis melo HOM05D005470 ORTHO05D006855 4.0e-21 105.1 121 53.7
arahy.Tifrunner.gnm1.ann1.GL96XS Arachis hypogaea HOM05D005470 ORTHO05D006855 5.2e-21 104.8 79 74.7
BcaC06g30753 Brassica carinata HOM05D005470 ORTHO05D006855 6.8e-21 104.4 124 52.4
BolC7t44465H Brassica oleracea HOM05D005470 ORTHO05D006855 6.8e-21 104.4 124 52.4
Thhalv10004618m.g Eutrema salsugineum HOM05D005470 ORTHO05D006855 6.8e-21 104.4 124 53.2
BraA06t26801Z Brassica rapa HOM05D005470 ORTHO05D006855 8.9e-21 104.0 125 53.6
ECA236G4489 Erigeron canadensis HOM05D005470 ORTHO05D006855 8.9e-21 104.0 121 52.1
HanXRQChr04g0110691 Helianthus annuus HOM05D005470 ORTHO05D006855 8.9e-21 104.0 121 52.1
CANSAT56G1556 Cannabis sativa HOM05D005470 ORTHO05D006855 1.2e-20 103.6 126 52.4
ATR0736G181 Amborella trichopoda HOM05D005470 ORTHO05D006855 2.0e-20 102.8 120 51.7
Cpa.g.sc8.172 Carica papaya HOM05D005470 ORTHO05D006855 2.0e-20 102.8 120 51.7
AL8G22020 Arabidopsis lyrata HOM05D005470 ORTHO05D006855 2.6e-20 102.4 125 52.0
CARHR182880 Cardamine hirsuta HOM05D005470 ORTHO05D006855 3.4e-20 102.1 125 52.0
CANSAT01G1736 Cannabis sativa HOM05D005470 ORTHO05D006855 4.4e-20 101.7 120 53.3
Ciclev10021316m.g Citrus clementina HOM05D005470 ORTHO05D006855 4.4e-20 101.7 121 52.9
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 4.4e-20 101.7 121 51.2
Peaxi162Scf00107g01116 Petunia axillaris HOM05D005470 ORTHO05D006855 5.8e-20 101.3 121 50.4
Carub.0008s0857 Capsella rubella HOM05D005470 ORTHO05D006855 7.6e-20 100.9 125 51.2
AT5G48840 Arabidopsis thaliana HOM05D005470 ORTHO05D006855 1.3e-19 100.1 125 50.4
C07p39460 Brassica napus HOM05D005470 ORTHO05D006855 1.3e-19 100.1 125 52.0
Zm00001eb064670 Zea mays HOM05D005470 ORTHO05D006855 1.3e-19 100.1 121 49.6
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 2.9e-19 99.0 111 55.0
HPP92_021568 Vanilla planifolia HOM05D005470 ORTHO05D006855 3.8e-19 98.6 121 49.6
Migut.D00523 Erythranthe guttata HOM05D005470 ORTHO05D006855 6.4e-19 97.8 121 49.6
Lsat_1_v5_gn_8_90101 Lactuca sativa HOM05D005470 ORTHO05D006855 6.4e-19 97.8 120 49.2
MSTRG.21429 Avicennia marina HOM05D005470 ORTHO05D006855 1.1e-18 97.1 122 45.9
arahy.Tifrunner.gnm1.ann1.HRPB72 Arachis hypogaea HOM05D005470 ORTHO05D006855 1.9e-18 96.3 73 75.3
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 2.4e-18 95.9 111 56.8
Migut.I00044 Erythranthe guttata HOM05D005470 ORTHO05D006855 4.2e-18 95.1 122 47.5
SEGI_32261 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 1.2e-17 93.6 120 49.2
TWI75G1873 Tripterygium wilfordii HOM05D005470 ORTHO05D006855 1.6e-17 93.2 121 49.6
Glyma.08G355700 Glycine max HOM05D005470 ORTHO05D006855 1.3e-16 90.1 135 45.2
SHI28627 Sapria himalayana HOM05D005470 ORTHO05D006855 5.1e-16 88.2 110 49.1
Pp3c24_12730 Physcomitrium patens HOM05D005470 ORTHO05D006855 2.5e-15 85.9 120 45.0
arahy.Tifrunner.gnm1.ann1.6Q4MDY Arachis hypogaea HOM05D005470 ORTHO05D038880 7.3e-15 84.3 43 90.7
SMO144G0038 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 7.3e-15 84.3 120 42.5
Cfa002558 Carpinus fangiana HOM05D005470 ORTHO05D006855 1.3e-14 83.6 89 57.3
unitig_92.g28105 Utricularia gibba HOM05D005470 ORTHO05D006855 1.3e-14 83.6 123 43.1
SMO351G0371 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 2.8e-14 82.4 121 41.3
Mapoly0006s0023 Marchantia polymorpha HOM05D005470 ORTHO05D006855 4.8e-14 81.6 120 45.0
vmacro15781 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 4.8e-14 81.6 110 48.2
CBR_g41676 Chara braunii HOM05D005470 ORTHO05D006855 3.4e-12 75.5 120 40.0
COL.COLO4_06654 Corchorus olitorius HOM05D005470 ORTHO05D006855 4.4e-12 75.1 50 72.0
FAN15G3610 Fragaria x ananassa HOM05D005470 ORTHO05D006855 1.7e-11 73.2 55 63.6
Nn1g07786 Nelumbo nucifera HOM05D005470 ORTHO05D006855 1.4e-10 70.1 82 51.2
Prupe.8G204600 Prunus persica HOM05D005470 ORTHO05D006855 3.0e-08 62.4 84 48.8
MCO10G244 Micromonas commoda HOM05D005470 ORTHO05D006855 3.3e-07 58.9 131 32.8
BcaC06g30729 Brassica carinata HOM05D005470 ORTHO05D006855 9.6e-07 57.4 83 47.0


User provided reference genes

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