Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M1DMSE Arachis hypogaea HOM05D046358 ORTHO05D086116 5.9e-80 300.8 155 100.0
arahy.Tifrunner.gnm1.ann1.BPM56L Arachis hypogaea HOM05D046358 ORTHO05D086050 3.1e-12 75.9 63 66.7
Lalb_Chr10g0107021 Lupinus albus HOM05D000228 ORTHO05D001122 2.3e-07 59.7 32 84.4
LjContig00272g0005901 Lotus japonicus HOM05D000228 ORTHO05D001122 1.1e-06 57.4 32 81.2
Medtr1g075520 Medicago truncatula HOM05D000228 ORTHO05D001122 1.1e-06 57.4 32 81.2
TPR.G1067 Trifolium pratense HOM05D000228 ORTHO05D001122 2.5e-06 56.2 32 81.2
Duzib213G0011 Durio zibethinus HOM05D000228 ORTHO05D001122 4.3e-06 55.5 32 78.1
Thecc.07G035200 Theobroma cacao HOM05D000228 ORTHO05D001122 5.7e-06 55.1 32 75.0
BcaB03g12518 Brassica carinata HOM05D000228 ORTHO05D001122 7.4e-06 54.7 32 75.0
BcaC07g38261 Brassica carinata HOM05D000228 ORTHO05D001122 7.4e-06 54.7 32 75.0
A08p20630 Brassica napus HOM05D000228 ORTHO05D001122 7.4e-06 54.7 32 75.0
C08p10080 Brassica napus HOM05D000228 ORTHO05D001122 7.4e-06 54.7 32 75.0
BolC8t48686H Brassica oleracea HOM05D000228 ORTHO05D001122 7.4e-06 54.7 32 75.0
BraA08t34017Z Brassica rapa HOM05D000228 ORTHO05D001122 7.4e-06 54.7 32 75.0
Thhalv10024309m.g Eutrema salsugineum HOM05D000228 ORTHO05D001122 9.7e-06 54.3 32 75.0


User provided reference genes

Program Settings