Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M13VEQ Arachis hypogaea HOM05D000729 ORTHO05D001063 7.7e-33 143.3 75 100.0
arahy.Tifrunner.gnm1.ann1.B0WG4N Arachis hypogaea HOM05D000729 ORTHO05D001063 1.9e-31 138.7 74 97.3
arahy.Tifrunner.gnm1.ann1.6Q4XIG Arachis hypogaea HOM05D000729 ORTHO05D001063 7.2e-31 136.7 74 95.9
arahy.Tifrunner.gnm1.ann1.984MHU Arachis hypogaea HOM05D000729 ORTHO05D001063 7.2e-31 136.7 74 94.6
arahy.Tifrunner.gnm1.ann1.E8A372 Arachis hypogaea HOM05D000729 ORTHO05D001063 4.7e-30 134.0 74 95.9
arahy.Tifrunner.gnm1.ann1.NY619X Arachis hypogaea HOM05D000729 ORTHO05D001063 4.4e-28 127.5 74 93.2
Gohir.A11G180330 Gossypium hirsutum HOM05D000729 ORTHO05D001063 2.4e-26 121.7 73 87.7
HanXRQChr00c0214g0572641 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr00c0264g0572891 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr00c0434g0574661 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr00c0747g0577151 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr01g0020151 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr02g0059631 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr05g0152351 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr05g0152491 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr07g0194901 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr10g0284481 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr11g0321181 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr11g0327111 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr11g0333791 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr12g0369921 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr13g0413721 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr13g0413871 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr15g0489701 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQChr17g0569661 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQCPg0580271 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
HanXRQCPg0580451 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
Peaxi162Scf00014g00287 Petunia axillaris HOM05D000729 ORTHO05D001063 2.8e-19 98.2 51 96.1
Nitab4.5_0004920g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 3.7e-19 97.8 61 85.2
C06p23140 Brassica napus HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BolC2t10586H Brassica oleracea HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BolSC29t60627H Brassica oleracea HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BolSC35t60718H Brassica oleracea HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BolSC37t60784H Brassica oleracea HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BolSC49t61156H Brassica oleracea HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BolSC49t61215H Brassica oleracea HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BraSC103t45493Z Brassica rapa HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BraSC138t45543Z Brassica rapa HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
BraSC58t46449Z Brassica rapa HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
CAN.G1298.16 Capsicum annuum HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
CAN.G612.3 Capsicum annuum HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
Gohir.A03G043250 Gossypium hirsutum HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
Gohir.A05G306433 Gossypium hirsutum HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
Gohir.A09G045500 Gossypium hirsutum HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
Hma1.2p1_0052F.1_g030753 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
Hma1.2p1_1244F.1_g270060 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
LjContig00319g0001918 Lotus japonicus HOM05D000729 ORTHO05D001063 8.2e-19 96.7 53 90.6
Potri.013G139112 Populus trichocarpa HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
RcHm_v2.0_CPg0501741 Rosa chinensis HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
RcHm_v2.0_CPg0502671 Rosa chinensis HOM05D000729 ORTHO05D001063 8.2e-19 96.7 51 94.1
RcHm_v2.0_Chr5g0051091 Rosa chinensis HOM05D000729 ORTHO05D001063 1.1e-18 96.3 51 92.2
CAN.G1738.18 Capsicum annuum HOM05D000729 ORTHO05D001063 1.4e-18 95.9 51 92.2
Migut.F01470 Erythranthe guttata HOM05D000729 ORTHO05D001063 1.4e-18 95.9 51 94.1
Solyc09g061460.3 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.4e-18 95.9 51 94.1
C06p21330 Brassica napus HOM05D000729 ORTHO05D001063 1.8e-18 95.5 51 92.2
CSS0034759 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 1.8e-18 95.5 51 92.2
DCAR_032530 Daucus carota HOM05D000729 ORTHO05D001063 1.8e-18 95.5 51 94.1
DCAR_032546 Daucus carota HOM05D000729 ORTHO05D001063 1.8e-18 95.5 51 94.1
HanXRQChr13g0413651 Helianthus annuus HOM05D000729 ORTHO05D001063 1.8e-18 95.5 51 94.1
HanXRQChr09g0249681 Helianthus annuus HOM05D000729 ORTHO05D001063 2.4e-18 95.1 51 94.1
Eucgr.I01854 Eucalyptus grandis HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Gohir.A05G307266 Gossypium hirsutum HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Gohir.D01G101826 Gossypium hirsutum HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
PGR111G0104 Punica granatum HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
PGR111G0125 Punica granatum HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Sed0008128 Sechium edule HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Sed0019191 Sechium edule HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund07988 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund08790 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund22780 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund27635 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund27858 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund27885 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund27951 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund28172 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund28540 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund28970 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund29048 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund29105 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund29118 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund29149 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Hund29155 Selenicereus undatus HOM05D000729 ORTHO05D001063 4.1e-18 94.4 51 92.2
Nn029s41588 Nelumbo nucifera HOM05D000729 ORTHO05D001063 5.3e-18 94.0 51 92.2
Nn031s41603 Nelumbo nucifera HOM05D000729 ORTHO05D001063 5.3e-18 94.0 51 92.2
Nn206s45069 Nelumbo nucifera HOM05D000729 ORTHO05D001063 5.3e-18 94.0 51 92.2
Nn219s45284 Nelumbo nucifera HOM05D000729 ORTHO05D001063 5.3e-18 94.0 51 92.2
Nn233s45561 Nelumbo nucifera HOM05D000729 ORTHO05D001063 5.3e-18 94.0 51 92.2
Nn269s46005 Nelumbo nucifera HOM05D000729 ORTHO05D001063 5.3e-18 94.0 51 92.2
Nitab4.5_0000729g0070 Nicotiana tabacum HOM05D000729 ORTHO05D001063 7.0e-18 93.6 50 94.0
PSO357G0279 Papaver somniferum HOM05D000729 ORTHO05D001063 7.0e-18 93.6 51 90.2
PSO548G0058 Papaver somniferum HOM05D000729 ORTHO05D001063 7.0e-18 93.6 51 90.2
PSO548G0065 Papaver somniferum HOM05D000729 ORTHO05D001063 7.0e-18 93.6 51 90.2
Thhalv10011731m.g Eutrema salsugineum HOM05D000729 ORTHO05D001063 1.2e-17 92.8 51 90.2
CAN.G398.11 Capsicum annuum HOM05D000729 ORTHO05D001063 2.0e-17 92.0 51 90.2
Hund01554 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.0e-17 92.0 51 90.2
Medtr3g035660 Medicago truncatula HOM05D000729 ORTHO05D001063 2.6e-17 91.7 54 85.2
CsaV3_UNG208970 Cucumis sativus L. HOM05D000729 ORTHO05D001063 3.5e-17 91.3 48 95.8
Sed0012918 Sechium edule HOM05D000729 ORTHO05D001063 3.5e-17 91.3 49 93.9
BolSC56t61238H Brassica oleracea HOM05D000729 ORTHO05D001063 4.5e-17 90.9 51 92.2
Gohir.A10G100333 Gossypium hirsutum HOM05D000729 ORTHO05D001063 4.5e-17 90.9 51 90.2
Hund03965 Selenicereus undatus HOM05D000729 ORTHO05D001063 5.9e-17 90.5 51 88.2
CAN.G30.9 Capsicum annuum HOM05D000729 ORTHO05D001063 7.7e-17 90.1 51 88.2
Solyc11g021120.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 7.7e-17 90.1 51 90.2
CAN.G1167.12 Capsicum annuum HOM05D000729 ORTHO05D001063 1.0e-16 89.7 51 90.2
Nitab4.5_0003957g0020 Nicotiana tabacum HOM05D000729 ORTHO05D002596 1.0e-16 89.7 64 76.6
CiPaw.03G002000 Carya illinoinensis HOM05D000729 ORTHO05D001063 1.3e-16 89.4 46 97.8
Nitab4.5_0000684g0120 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.7e-16 89.0 73 67.1
CAN.G1185.9 Capsicum annuum HOM05D000729 ORTHO05D001063 3.8e-16 87.8 51 84.3
Gohir.D01G134200 Gossypium hirsutum HOM05D000729 ORTHO05D001063 6.5e-16 87.0 51 86.3
Nitab4.5_0004929g0040 Nicotiana tabacum HOM05D000729 ORTHO05D001063 9.4e-15 83.2 57 78.9
Lsat_1_v5_gn_6_40860 Lactuca sativa HOM05D000729 ORTHO05D001063 1.6e-14 82.4 55 81.8
Solyc06g009580.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.6e-14 82.4 43 97.7
Medtr4g103280 Medicago truncatula HOM05D000729 ORTHO05D002596 6.1e-14 80.5 64 71.9
Hund23965 Selenicereus undatus HOM05D000729 ORTHO05D001063 6.8e-13 77.0 51 78.4
Phvul.003G089802 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 8.8e-13 76.6 40 95.0
Phvul.009G090272 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 8.8e-13 76.6 40 95.0
Lalb_Chr07g0191631 Lupinus albus HOM05D000729 ORTHO05D001063 2.6e-12 75.1 40 92.5
HanXRQChr00c0780g0577311 Helianthus annuus HOM05D000729 ORTHO05D001063 3.4e-12 74.7 39 94.9
HanXRQChr10g0317951 Helianthus annuus HOM05D000729 ORTHO05D001063 3.4e-12 74.7 39 94.9
HanXRQChr16g0530791 Helianthus annuus HOM05D000729 ORTHO05D001063 3.4e-12 74.7 39 94.9
SalBow1G3941 Salvia bowleyana HOM05D000729 ORTHO05D001063 3.4e-12 74.7 39 94.9
SalBow1G4562 Salvia bowleyana HOM05D000729 ORTHO05D001063 3.4e-12 74.7 39 94.9
SalBow1G6647 Salvia bowleyana HOM05D000729 ORTHO05D001063 3.4e-12 74.7 39 94.9
SalBow6G4786 Salvia bowleyana HOM05D000729 ORTHO05D001063 3.4e-12 74.7 39 94.9
HanXRQChr00c0379g0574301 Helianthus annuus HOM05D000729 ORTHO05D001063 5.7e-12 73.9 42 88.1
BraSC143t45669Z Brassica rapa HOM05D000729 ORTHO05D001063 9.7e-12 73.2 39 92.3
Gohir.A04G039450 Gossypium hirsutum HOM05D000729 ORTHO05D001063 9.7e-12 73.2 39 92.3
Gohir.D02G117466 Gossypium hirsutum HOM05D000729 ORTHO05D001063 9.7e-12 73.2 39 92.3
Gohir.D08G147600 Gossypium hirsutum HOM05D000729 ORTHO05D001063 9.7e-12 73.2 39 89.7
Hma1.2p1_0052F.1_g030756 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 9.7e-12 73.2 39 92.3
Hma1.2p1_1244F.1_g270050 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 9.7e-12 73.2 39 92.3
Hund27921 Selenicereus undatus HOM05D000729 ORTHO05D001063 9.7e-12 73.2 40 90.0
HanXRQChr02g0059781 Helianthus annuus HOM05D000729 ORTHO05D001063 1.3e-11 72.8 42 85.7
Gohir.D02G152152 Gossypium hirsutum HOM05D000729 ORTHO05D001063 2.2e-11 72.0 37 97.3
Nitab4.5_0006542g0040 Nicotiana tabacum HOM05D000729 ORTHO05D001063 3.7e-11 71.2 58 69.0
Gohir.A09G093100 Gossypium hirsutum HOM05D000729 ORTHO05D001063 8.3e-11 70.1 37 94.6
Lalb_Chr07g0191591 Lupinus albus HOM05D000729 ORTHO05D001063 8.3e-11 70.1 40 87.5
Nitab4.5_0007979g0050 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.8e-10 68.9 58 69.0
Solyc02g011890.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 1.8e-10 68.9 53 71.7
CSS0018773 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 2.4e-10 68.6 42 78.6
Sc20g0001970 Simmondsia chinensis HOM05D000680 ORTHO05D000738 3.1e-10 68.2 39 84.6
Lalb_Chr25g0281801 Lupinus albus HOM05D000729 ORTHO05D001063 4.1e-10 67.8 40 82.5
Nitab4.5_0012558g0020 Nicotiana tabacum HOM05D000729 ORTHO05D002596 5.3e-10 67.4 58 65.5
MD01G1004600 Malus domestica HOM05D000729 ORTHO05D001063 9.1e-10 66.6 39 87.2
Peaxi162Scf00005g04915 Petunia axillaris HOM05D000729 ORTHO05D001063 1.2e-09 66.2 39 87.2
Nitab4.5_0004533g0060 Nicotiana tabacum HOM05D000729 ORTHO05D001063 2.7e-09 65.1 39 82.1
Gohir.A06G098106 Gossypium hirsutum HOM05D000729 ORTHO05D001063 4.5e-09 64.3 39 87.2
Cc00_g23030 Coffea canephora HOM05D000729 ORTHO05D001063 5.9e-09 63.9 39 82.1
Psat5g286120 Pisum sativum HOM05D000729 ORTHO05D001063 7.7e-09 63.5 40 77.5
EL10As15g24113 Beta vulgaris HOM05D000729 ORTHO05D001063 1.1e-07 59.7 59 62.7
Potri.011G075051 Populus trichocarpa HOM05D000729 ORTHO05D001063 1.5e-07 59.3 29 96.6
Lalb_Chr25g0281891 Lupinus albus HOM05D000729 ORTHO05D001063 5.5e-07 57.4 40 72.5
HanXRQChr00c0634g0576581 Helianthus annuus HOM05D000729 ORTHO05D001063 2.1e-06 55.5 27 100.0


User provided reference genes

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