Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.M08FD2 Arachis hypogaea HOM05D000913 ORTHO05D000687 1.1e-62 243.4 146 100.0
arahy.Tifrunner.gnm1.ann1.B2ZTLF Arachis hypogaea HOM05D000913 ORTHO05D000687 4.2e-51 204.9 146 90.4
Lj2g0027181 Lotus japonicus HOM05D000913 ORTHO05D000687 1.6e-13 80.1 81 56.8
Medtr6g082180 Medicago truncatula HOM05D000913 ORTHO05D000687 2.9e-12 75.9 70 62.9
TPR.G31615 Trifolium pratense HOM05D000913 ORTHO05D000687 1.1e-11 73.9 71 59.2
Lalb_Chr22g0353251 Lupinus albus HOM05D000913 ORTHO05D000687 1.5e-11 73.6 73 56.2
Psat0s172g0040 Pisum sativum HOM05D000913 ORTHO05D000687 5.5e-11 71.6 65 63.1
arahy.Tifrunner.gnm1.ann1.IVAP43 Arachis hypogaea HOM05D000913 ORTHO05D000687 9.4e-11 70.9 81 50.6
arahy.Tifrunner.gnm1.ann1.29G5I6 Arachis hypogaea HOM05D000913 ORTHO05D000687 1.6e-10 70.1 80 52.5
Lalb_Chr22g0353261 Lupinus albus HOM05D000913 ORTHO05D000687 1.6e-10 70.1 75 53.3
MD03G1038900 Malus domestica HOM05D000913 ORTHO05D000687 2.1e-10 69.7 81 50.6
arahy.Tifrunner.gnm1.ann1.EN7GHH Arachis hypogaea HOM05D000913 ORTHO05D000687 2.7e-10 69.3 79 49.4
arahy.Tifrunner.gnm1.ann1.JV1GEI Arachis hypogaea HOM05D000913 ORTHO05D000687 2.7e-10 69.3 79 49.4
arahy.Tifrunner.gnm1.ann1.S87WCM Arachis hypogaea HOM05D000913 ORTHO05D000687 2.7e-10 69.3 81 49.4
Medtr6g082190 Medicago truncatula HOM05D000913 ORTHO05D000687 2.7e-10 69.3 65 63.1
arahy.Tifrunner.gnm1.ann1.HRA598 Arachis hypogaea HOM05D000913 ORTHO05D000687 3.6e-10 68.9 80 52.5
Migut.M01600 Erythranthe guttata HOM05D000913 ORTHO05D000687 3.6e-10 68.9 76 50.0
SalBow8G3675 Salvia bowleyana HOM05D000913 ORTHO05D000687 3.6e-10 68.9 75 53.3
SalBow8G4938 Salvia bowleyana HOM05D000913 ORTHO05D000687 3.6e-10 68.9 75 53.3
Glyma.09G179800 Glycine max HOM05D000913 ORTHO05D000687 4.7e-10 68.6 81 51.9
Oeu049442.1 Olea europaea HOM05D000913 ORTHO05D000687 4.7e-10 68.6 73 49.3
Psat0s172g0120 Pisum sativum HOM05D000913 ORTHO05D000687 4.7e-10 68.6 65 61.5
SalBow8G5506 Salvia bowleyana HOM05D000913 ORTHO05D000687 4.7e-10 68.6 74 51.4
Phvul.004G153100 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 6.1e-10 68.2 72 52.8
Oeu049450.1 Olea europaea HOM05D000913 ORTHO05D000687 1.0e-09 67.4 73 47.9
SalBow8G4274 Salvia bowleyana HOM05D000913 ORTHO05D000687 1.4e-09 67.0 75 50.7
SalBow8G4609 Salvia bowleyana HOM05D000913 ORTHO05D000687 1.4e-09 67.0 75 50.7
TPR.G17672 Trifolium pratense HOM05D000913 ORTHO05D000687 5.2e-09 65.1 70 54.3
CiPaw.11G208300 Carya illinoinensis HOM05D000913 ORTHO05D000687 6.7e-09 64.7 76 48.7
Medtr5g084660 Medicago truncatula HOM05D000913 ORTHO05D000687 6.7e-09 64.7 71 53.5
Duzib268G1294 Durio zibethinus HOM05D000913 ORTHO05D000687 8.8e-09 64.3 81 45.7
Lalb_Chr04g0250241 Lupinus albus HOM05D000913 ORTHO05D000687 8.8e-09 64.3 70 50.0
Phvul.008G282300 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 8.8e-09 64.3 81 48.1
Prupe.6G030200 Prunus persica HOM05D000913 ORTHO05D000687 8.8e-09 64.3 78 48.7
MD11G1039300 Malus domestica HOM05D000913 ORTHO05D000687 1.2e-08 63.9 79 50.6
QL05p005810 Quercus lobata HOM05D000913 ORTHO05D000687 2.0e-08 63.2 81 46.9
MD03G1038400 Malus domestica HOM05D000913 ORTHO05D000687 2.6e-08 62.8 76 47.4
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 2.6e-08 62.8 81 48.1
arahy.Tifrunner.gnm1.ann1.U821IZ Arachis hypogaea HOM05D000913 ORTHO05D000687 3.3e-08 62.4 74 48.6
CANSAT11G0550 Cannabis sativa HOM05D000913 ORTHO05D000687 3.3e-08 62.4 75 49.3
CiPaw.01G191500 Carya illinoinensis HOM05D000913 ORTHO05D000687 3.3e-08 62.4 80 47.5
CiPaw.14G082800 Carya illinoinensis HOM05D000913 ORTHO05D000687 4.4e-08 62.0 75 48.0
Glyma.07G098500 Glycine max HOM05D000913 ORTHO05D000687 5.7e-08 61.6 75 52.0
Glyma.14G051600 Glycine max HOM05D000913 ORTHO05D000687 5.7e-08 61.6 69 47.8
VMungo0647G1502 Vigna mungo HOM05D000913 ORTHO05D000687 5.7e-08 61.6 69 49.3
QL05p004858 Quercus lobata HOM05D000913 ORTHO05D000687 7.5e-08 61.2 81 43.2
A05p40590 Brassica napus HOM05D000913 ORTHO05D000687 9.7e-08 60.8 79 43.0
BraA05t22790Z Brassica rapa HOM05D000913 ORTHO05D000687 9.7e-08 60.8 79 43.0
Prupe.6G030300 Prunus persica HOM05D000913 ORTHO05D000687 9.7e-08 60.8 81 45.7
Cfa016930 Carpinus fangiana HOM05D000913 ORTHO05D000687 1.3e-07 60.5 76 51.3
Thecc.07G019800 Theobroma cacao HOM05D000913 ORTHO05D000687 1.3e-07 60.5 75 45.3
Haze_09888 Corylus avellana HOM05D000913 ORTHO05D000687 1.7e-07 60.1 77 44.2
FvH4_3g42050 Fragaria vesca HOM05D000913 ORTHO05D000687 1.7e-07 60.1 80 46.2
Haze_09880 Corylus avellana HOM05D000913 ORTHO05D000687 2.2e-07 59.7 75 46.7
MD03G1039100 Malus domestica HOM05D000913 ORTHO05D000687 2.2e-07 59.7 80 48.8
Oeu049439.1 Olea europaea HOM05D000913 ORTHO05D000687 2.2e-07 59.7 75 48.0
arahy.Tifrunner.gnm1.ann1.E2IRB4 Arachis hypogaea HOM05D000913 ORTHO05D000687 2.8e-07 59.3 74 45.9
arahy.Tifrunner.gnm1.ann1.J75ZHQ Arachis hypogaea HOM05D000913 ORTHO05D000687 2.8e-07 59.3 82 50.0
RcHm_v2.0_Chr5g0075281 Rosa chinensis HOM05D000913 ORTHO05D000687 2.8e-07 59.3 80 46.2
arahy.Tifrunner.gnm1.ann1.FE2NQF Arachis hypogaea HOM05D000913 ORTHO05D000687 3.7e-07 58.9 82 50.0
Prupe.6G030400 Prunus persica HOM05D000913 ORTHO05D000687 3.7e-07 58.9 78 47.4
QL05p004788 Quercus lobata HOM05D000913 ORTHO05D000687 3.7e-07 58.9 81 44.4
Cpa.g.sc12.95 Carica papaya HOM05D000913 ORTHO05D000687 4.8e-07 58.5 76 43.4
COL.COLO4_09796 Corchorus olitorius HOM05D000913 ORTHO05D000687 4.8e-07 58.5 81 43.2
MD03G1039000 Malus domestica HOM05D000913 ORTHO05D000687 4.8e-07 58.5 74 48.6
Manes.11G055424 Manihot esculenta HOM05D000913 ORTHO05D000687 4.8e-07 58.5 81 46.9
Gorai.009G446400 Gossypium raimondii HOM05D000913 ORTHO05D000687 6.3e-07 58.2 75 45.3
LjContig00029g0025163 Lotus japonicus HOM05D000913 ORTHO05D000687 6.3e-07 58.2 67 47.8
Nn1g06060 Nelumbo nucifera HOM05D000913 ORTHO05D000687 6.3e-07 58.2 75 46.7
Atru.chr2.3866 Acer truncatum HOM05D000913 ORTHO05D000687 8.2e-07 57.8 71 52.1
CARHR095770 Cardamine hirsuta HOM05D000913 ORTHO05D000687 8.2e-07 57.8 143 32.2
Duzib213G0636 Durio zibethinus HOM05D000913 ORTHO05D000687 8.2e-07 57.8 80 38.8
Hma1.2p1_0048F.1_g028140 Hydrangea macrophylla HOM05D000913 ORTHO05D000687 8.2e-07 57.8 75 48.0
Medtr6g082280 Medicago truncatula HOM05D000913 ORTHO05D000687 8.2e-07 57.8 75 50.7
Medtr6g082330 Medicago truncatula HOM05D000913 ORTHO05D000687 8.2e-07 57.8 75 50.7
Oeu049436.1 Olea europaea HOM05D000913 ORTHO05D000687 8.2e-07 57.8 75 45.3
Manes.03G137300 Manihot esculenta HOM05D000913 ORTHO05D000687 1.1e-06 57.4 76 50.0
Medtr3g082250 Medicago truncatula HOM05D000913 ORTHO05D000687 1.1e-06 57.4 80 41.2
Prupe.6G030500 Prunus persica HOM05D000913 ORTHO05D000687 1.1e-06 57.4 70 48.6
Haze_09886 Corylus avellana HOM05D001067 ORTHO05D000876 1.4e-06 57.0 73 49.3
FvH4_3g42060 Fragaria vesca HOM05D000913 ORTHO05D000687 1.4e-06 57.0 80 42.5
FAN16G2023 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.4e-06 57.0 80 43.8
FAN16G3426 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.4e-06 57.0 79 43.0
FAN11G3382 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.8e-06 56.6 78 43.6
FAN21G3003 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.8e-06 56.6 80 43.8
Manes.11G060239 Manihot esculenta HOM05D000913 ORTHO05D000687 1.8e-06 56.6 80 47.5
Prupe.6G031000 Prunus persica HOM05D000913 ORTHO05D000687 1.8e-06 56.6 80 45.0
CiPaw.11G201200 Carya illinoinensis HOM05D000913 ORTHO05D000687 2.4e-06 56.2 80 46.2
FvH4_3g42100 Fragaria vesca HOM05D000913 ORTHO05D000687 2.4e-06 56.2 72 41.7
Gohir.A04G008700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 2.4e-06 56.2 75 44.0
MD11G1039200 Malus domestica HOM05D000913 ORTHO05D000687 2.4e-06 56.2 77 45.5
Manes.11G060024 Manihot esculenta HOM05D000913 ORTHO05D000687 2.4e-06 56.2 76 48.7
Gohir.A04G003500 Gossypium hirsutum HOM05D000913 ORTHO05D000687 3.1e-06 55.8 81 40.7
Gohir.A04G009400 Gossypium hirsutum HOM05D000913 ORTHO05D000687 3.1e-06 55.8 81 39.5
Nn5g28779 Nelumbo nucifera HOM05D000913 ORTHO05D000687 3.1e-06 55.8 80 42.5
Nn5g28781 Nelumbo nucifera HOM05D000913 ORTHO05D000687 3.1e-06 55.8 80 42.5
Oeu040052.1 Olea europaea HOM05D000913 ORTHO05D000687 3.1e-06 55.8 80 45.0
RcHm_v2.0_Chr5g0075291 Rosa chinensis HOM05D000913 ORTHO05D000687 3.1e-06 55.8 79 43.0
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 3.1e-06 55.8 80 46.2
VMungo0464G1890 Vigna mungo HOM05D000913 ORTHO05D000687 3.1e-06 55.8 68 47.1
Cpa.g.sc12.187 Carica papaya HOM05D000913 ORTHO05D000687 4.1e-06 55.5 81 44.4
Dinv05335 Davidia involucrata HOM05D000913 ORTHO05D000687 4.1e-06 55.5 81 44.4
Gohir.D07G169300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 4.1e-06 55.5 81 43.2
Gorai.001G189300 Gossypium raimondii HOM05D000913 ORTHO05D000687 4.1e-06 55.5 81 43.2
Gorai.009G452700 Gossypium raimondii HOM05D000913 ORTHO05D000687 4.1e-06 55.5 78 44.9
BcaB03g14690 Brassica carinata HOM05D000913 ORTHO05D000687 5.3e-06 55.1 81 38.3
CSS0038172 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 5.3e-06 55.1 81 43.2
Duzib213G0838 Durio zibethinus HOM05D000913 ORTHO05D000687 5.3e-06 55.1 72 41.7
Gorai.007G164300 Gossypium raimondii HOM05D000913 ORTHO05D000687 5.3e-06 55.1 81 45.7
TPR.G27426 Trifolium pratense HOM05D000913 ORTHO05D000687 5.3e-06 55.1 80 42.5
VMungo0647G1590 Vigna mungo HOM05D000913 ORTHO05D000687 5.3e-06 55.1 72 44.4
Aqoxy4G01749 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 7.0e-06 54.7 81 40.7
DCAR_019659 Daucus carota HOM05D000913 ORTHO05D000687 7.0e-06 54.7 82 45.1
DCAR_021079 Daucus carota HOM05D000913 ORTHO05D000687 7.0e-06 54.7 80 45.0
DCAR_021080 Daucus carota HOM05D000913 ORTHO05D000687 7.0e-06 54.7 82 43.9
Dinv03824 Davidia involucrata HOM05D000913 ORTHO05D000687 7.0e-06 54.7 76 44.7
Duzib268G0517 Durio zibethinus HOM05D000913 ORTHO05D000687 7.0e-06 54.7 76 43.4
Gohir.D11G154200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 7.0e-06 54.7 81 44.4
GSVIVG01014798001 Vitis vinifera HOM05D000913 ORTHO05D000687 7.0e-06 54.7 75 45.3
BcaC01g01566 Brassica carinata HOM05D011788 ORTHO05D014339 9.1e-06 54.3 72 45.8
DCAR_019660 Daucus carota HOM05D000913 ORTHO05D000687 9.1e-06 54.3 149 36.9
Thhalv10021695m.g Eutrema salsugineum HOM05D000913 ORTHO05D000687 9.1e-06 54.3 81 37.0
FAN21G2856 Fragaria x ananassa HOM05D000913 ORTHO05D000687 9.1e-06 54.3 70 45.7
FAN25G2144 Fragaria x ananassa HOM05D000913 ORTHO05D000687 9.1e-06 54.3 70 45.7
Thecc.07G019700 Theobroma cacao HOM05D000913 ORTHO05D000687 9.1e-06 54.3 81 42.0
Zm00001eb080170 Zea mays HOM05D000913 ORTHO05D000687 9.1e-06 54.3 76 46.1
Zm00001eb080210 Zea mays HOM05D000913 ORTHO05D000687 9.1e-06 54.3 79 45.6


User provided reference genes

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