Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LXQN6Z Arachis hypogaea HOM05D004001 ORTHO05D004559 1.4e-227 792.7 423 100.0
arahy.Tifrunner.gnm1.ann1.7YWS89 Arachis hypogaea HOM05D004001 ORTHO05D004559 3.1e-179 632.1 419 85.0
arahy.Tifrunner.gnm1.ann1.JKPH3R Arachis hypogaea HOM05D004001 ORTHO05D004559 3.6e-55 219.9 487 39.4
arahy.Tifrunner.gnm1.ann1.0Y1PWL Arachis hypogaea HOM05D004001 ORTHO05D004559 2.4e-54 217.2 509 38.9
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 3.1e-46 190.3 477 35.8
vmacro13388 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 3.1e-46 190.3 517 35.8
CiPaw.01G260600 Carya illinoinensis HOM05D004001 ORTHO05D004559 7.6e-45 185.7 506 34.8
Actinidia12272 Actinidia chinensis HOM05D004001 ORTHO05D004559 4.9e-44 183.0 518 33.4
CANSAT56G0321 Cannabis sativa HOM05D004001 ORTHO05D004559 1.1e-43 181.8 482 36.9
Rhsim07G0026000 Rhododendron simsii HOM05D004001 ORTHO05D004559 1.4e-43 181.4 310 44.5
Manes.05G044000 Manihot esculenta HOM05D004001 ORTHO05D004559 3.2e-43 180.3 474 35.0
Rhsim07G0025900 Rhododendron simsii HOM05D004001 ORTHO05D004559 4.2e-43 179.9 353 40.8
Nitab4.5_0010473g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 1.6e-42 177.9 309 44.7
Actinidia31422 Actinidia chinensis HOM05D004001 ORTHO05D004559 3.5e-42 176.8 344 39.5
Atru.chr5.325 Acer truncatum HOM05D004001 ORTHO05D004559 7.9e-42 175.6 487 34.1
TAR629G2254 Trochodendron aralioides HOM05D004001 ORTHO05D004559 7.9e-42 175.6 266 45.5
FvH4_7g12090 Fragaria vesca HOM05D004001 ORTHO05D004559 5.1e-41 172.9 275 44.7
FAN06G4715 Fragaria x ananassa HOM05D004001 ORTHO05D004559 5.1e-41 172.9 275 44.7
FAN10G1409 Fragaria x ananassa HOM05D004001 ORTHO05D004559 5.1e-41 172.9 275 44.7
TAR636G3381 Trochodendron aralioides HOM05D004001 ORTHO05D004559 6.7e-41 172.6 256 47.7
arahy.Tifrunner.gnm1.ann1.2UV9R4 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.5e-40 171.4 506 34.2
Lj1g0027935 Lotus japonicus HOM05D004001 ORTHO05D004559 1.5e-40 171.4 468 34.8
Sed0014964 Sechium edule HOM05D004001 ORTHO05D004559 1.5e-40 171.4 337 38.6
FAN06G2206 Fragaria x ananassa HOM05D004001 ORTHO05D004559 2.5e-40 170.6 275 44.4
Sc26g0001190 Simmondsia chinensis HOM05D004001 ORTHO05D004559 4.3e-40 169.9 424 36.1
SGA_v2.0_scaffold153G37027 Striga asiatica HOM05D004001 ORTHO05D001724 1.6e-39 167.9 232 49.1
Solyc01g091500.3 Solanum lycopersicum HOM05D004001 ORTHO05D004559 2.8e-39 167.2 317 43.8
FAN10G1690 Fragaria x ananassa HOM05D004001 ORTHO05D004559 3.7e-39 166.8 275 43.6
GSVIVG01027630001 Vitis vinifera HOM05D004001 ORTHO05D004559 4.8e-39 166.4 405 37.3
Sopen01g037250 Solanum pennellii HOM05D004001 ORTHO05D004559 8.1e-39 165.6 313 43.5
EL10Ac1g00911 Beta vulgaris HOM05D004001 ORTHO05D004559 7.6e-37 159.1 303 41.6
CAN.G170.4 Capsicum annuum HOM05D004001 ORTHO05D004559 7.6e-37 159.1 303 44.6
TWI14G1161 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 9.9e-37 158.7 440 34.8
arahy.Tifrunner.gnm1.ann1.H5PXMS Arachis hypogaea HOM05D004001 ORTHO05D004559 1.7e-36 157.9 498 33.1
CsaV3_3G009550 Cucumis sativus L. HOM05D004001 ORTHO05D004559 1.7e-36 157.9 336 36.9
Glyma.09G268000 Glycine max HOM05D004001 ORTHO05D004559 3.8e-36 156.8 354 39.5
arahy.Tifrunner.gnm1.ann1.CI1NNE Arachis hypogaea HOM05D004001 ORTHO05D004559 4.9e-36 156.4 506 33.6
Glyma.18G221900 Glycine max HOM05D004001 ORTHO05D004559 8.4e-36 155.6 519 33.7
Lj7C526G13 Lonicera japonica HOM05D004001 ORTHO05D004559 8.4e-36 155.6 298 43.3
Nitab4.5_0004320g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 1.2e-34 151.8 312 40.7
Oeu037907.1 Olea europaea HOM05D004001 ORTHO05D004559 1.6e-34 151.4 348 38.8
PSO478G3708 Papaver somniferum HOM05D004001 ORTHO05D004559 2.1e-34 151.0 281 40.2
CDE04G0282 Ceratophyllum demersum HOM05D004001 ORTHO05D004559 4.6e-34 149.8 340 37.9
Lalb_Chr12g0208391 Lupinus albus HOM05D004001 ORTHO05D004559 6.0e-34 149.4 470 33.0
Lalb_Chr12g0208441 Lupinus albus HOM05D004001 ORTHO05D004559 6.0e-34 149.4 470 33.0
Gohir.A12G102200 Gossypium hirsutum HOM05D004001 ORTHO05D004559 7.9e-34 149.1 462 32.9
Gohir.D11G086300 Gossypium hirsutum HOM05D004001 ORTHO05D004559 7.9e-34 149.1 343 37.3
Ca_07831_v3 Cicer arietinum L. HOM05D004001 ORTHO05D004559 1.0e-33 148.7 440 33.0
unitig_8.g3817 Utricularia gibba HOM05D004001 ORTHO05D004559 8.7e-33 145.6 404 35.6
arahy.Tifrunner.gnm1.ann1.5M5P73 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.1e-32 145.2 267 42.3
Haze_16831 Corylus avellana HOM05D004001 ORTHO05D004559 1.1e-32 145.2 496 30.6
Zm00001eb403560 Zea mays HOM05D004001 ORTHO05D004559 1.5e-32 144.8 271 42.4
SalBow5G4135 Salvia bowleyana HOM05D004001 ORTHO05D004559 1.9e-32 144.4 506 30.6
QL08p051978 Quercus lobata HOM05D004001 ORTHO05D004559 4.3e-32 143.3 488 31.1
Gorai.007G092200 Gossypium raimondii HOM05D004001 ORTHO05D004559 9.6e-32 142.1 337 36.5
Lalb_Chr07g0189651 Lupinus albus HOM05D004001 ORTHO05D004559 1.6e-31 141.4 302 40.1
MSTRG.20759 Avicennia marina HOM05D004001 ORTHO05D004559 2.1e-31 141.0 313 37.7
Eucgr.E01409 Eucalyptus grandis HOM05D004001 ORTHO05D004559 4.8e-31 139.8 342 35.4
Os03g0127600 Oryza sativa ssp. japonica HOM05D004001 ORTHO05D004559 8.2e-31 139.0 346 36.1
PGSC0003DMG400012752 Solanum tuberosum HOM05D004001 ORTHO05D004559 8.2e-31 139.0 332 38.9
Ciclev10018784m.g Citrus clementina HOM05D004001 ORTHO05D004559 1.1e-30 138.7 426 34.7
Thecc.01G374400 Theobroma cacao HOM05D004001 ORTHO05D004559 1.1e-30 138.7 485 31.8
ClCG05G002120 Citrullus lanatus HOM05D004001 ORTHO05D004559 1.8e-30 137.9 579 28.2
Peaxi162Scf00021g01316 Petunia axillaris HOM05D004001 ORTHO05D004559 2.4e-30 137.5 211 48.3
Potri.014G071400 Populus trichocarpa HOM05D004001 ORTHO05D004559 3.1e-30 137.1 228 43.9
arahy.Tifrunner.gnm1.ann1.K6PBMX Arachis hypogaea HOM05D004001 ORTHO05D004559 5.3e-30 136.3 160 53.1
Hund17008 Selenicereus undatus HOM05D004001 ORTHO05D004559 6.9e-30 136.0 365 36.2
unitig_31.g34038 Utricularia gibba HOM05D004001 ORTHO05D004559 3.4e-29 133.7 411 33.8
PSO782G3046 Papaver somniferum HOM05D004001 ORTHO05D004559 4.5e-29 133.3 280 36.4
Duzib138G1007 Durio zibethinus HOM05D004001 ORTHO05D004559 2.9e-28 130.6 258 41.5
Sabra14G0050700 Salix brachista HOM05D004001 ORTHO05D004559 2.9e-28 130.6 212 44.8
Cc02_g36540 Coffea canephora HOM05D004001 ORTHO05D004559 6.5e-28 129.4 272 39.3
Psat3g115320 Pisum sativum HOM05D004001 ORTHO05D004559 4.2e-27 126.7 472 30.9
Cfa001702 Carpinus fangiana HOM05D004001 ORTHO05D004559 5.5e-27 126.3 496 29.0
Medtr7g075140 Medicago truncatula HOM05D004001 ORTHO05D004559 9.3e-27 125.6 228 43.0
AUR62013619 Chenopodium quinoa HOM05D004001 ORTHO05D004559 1.2e-26 125.2 302 37.1
Prupe.2G147400 Prunus persica HOM05D004001 ORTHO05D004559 1.2e-26 125.2 516 30.4
MD02G1201400 Malus domestica HOM05D004001 ORTHO05D004559 1.6e-26 124.8 493 28.4
Aqoxy7G00586 Aquilegia oxysepala HOM05D004001 ORTHO05D004559 2.7e-26 124.0 283 36.4
AUR62004229 Chenopodium quinoa HOM05D004001 ORTHO05D004559 2.7e-26 124.0 306 37.3
RcHm_v2.0_Chr1g0350831 Rosa chinensis HOM05D004001 ORTHO05D004559 1.5e-24 118.2 272 35.3
arahy.Tifrunner.gnm1.ann1.RB3Z54 Arachis hypogaea HOM05D004001 ORTHO05D004559 2.5e-24 117.5 176 47.2
Nn4g26437 Nelumbo nucifera HOM05D004001 ORTHO05D004559 1.3e-23 115.2 229 39.3
arahy.Tifrunner.gnm1.ann1.DK59KL Arachis hypogaea HOM05D004001 ORTHO05D004559 1.6e-23 114.8 144 50.0
SHI13515 Sapria himalayana HOM05D004001 ORTHO05D004559 2.2e-23 114.4 221 37.1
arahy.Tifrunner.gnm1.ann1.R58KW0 Arachis hypogaea HOM05D004001 ORTHO05D084115 2.8e-23 114.0 63 98.4
SGA_v2.0_scaffold95G28893 Striga asiatica HOM05D004001 ORTHO05D004559 1.4e-22 111.7 371 32.3
FAN03G0266 Fragaria x ananassa HOM05D004001 ORTHO05D004559 2.4e-22 110.9 262 33.6
MELO3C006177.2 Cucumis melo HOM05D004001 ORTHO05D004559 6.9e-22 109.4 474 28.1
arahy.Tifrunner.gnm1.ann1.EYC1DY Arachis hypogaea HOM05D004001 ORTHO05D004559 1.2e-21 108.6 300 35.3
Migut.B01647 Erythranthe guttata HOM05D004001 ORTHO05D004559 2.6e-21 107.5 232 37.5
arahy.Tifrunner.gnm1.ann1.9J1L2I Arachis hypogaea HOM05D004001 ORTHO05D004559 7.7e-21 105.9 300 35.0
Zm00001eb002020 Zea mays HOM05D004001 ORTHO05D004559 1.0e-20 105.5 197 39.1
MBI11_g23939_MAGBIO Magnolia biondii HOM05D004001 ORTHO05D004559 1.3e-20 105.1 346 31.5
CARHR140650 Cardamine hirsuta HOM05D004001 ORTHO05D004559 1.1e-19 102.1 264 36.7
Lj9C572T3 Lonicera japonica HOM05D004001 ORTHO05D004559 1.6e-18 98.2 232 36.2
Sp4g27490 Schrenkiella parvula HOM05D004001 ORTHO05D004559 3.6e-18 97.1 298 33.6
Lsat_1_v5_gn_3_133301 Lactuca sativa HOM05D004001 ORTHO05D004559 4.6e-18 96.7 238 36.1
AL4G44630 Arabidopsis lyrata HOM05D004001 ORTHO05D004559 7.9e-18 95.9 303 33.0
Phvul.008G075200 Phaseolus vulgaris HOM05D004001 ORTHO05D004559 1.4e-17 95.1 364 31.3
CSS0038978 Camellia sinensis var. sinensis HOM05D004001 ORTHO05D004559 1.8e-17 94.7 166 40.4
PGR042G2753 Punica granatum HOM05D004001 ORTHO05D004559 2.3e-17 94.4 356 32.3
Gorai.008G114700 Gossypium raimondii HOM05D004001 ORTHO05D004559 3.9e-17 93.6 326 32.8
AT2G45460 Arabidopsis thaliana HOM05D004001 ORTHO05D004559 5.1e-17 93.2 301 32.9
HanXRQChr03g0093811 Helianthus annuus HOM05D004001 ORTHO05D004559 2.0e-16 91.3 333 29.7
SEGI_21780 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 3.3e-16 90.5 267 32.2
ATR0757G164 Amborella trichopoda HOM05D004001 ORTHO05D004559 4.3e-16 90.1 183 37.2
ECA240G2591 Erigeron canadensis HOM05D004001 ORTHO05D004559 1.7e-15 88.2 303 32.0
Cpa.g.sc18.133 Carica papaya HOM05D004001 ORTHO05D004559 1.1e-14 85.5 203 35.5
Ah.16g103740 Amaranthus hybridus HOM05D004001 ORTHO05D004559 2.4e-14 84.3 212 36.3
BcaB02g08998 Brassica carinata HOM05D004001 ORTHO05D004559 2.4e-14 84.3 359 28.7
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 2.0e-13 81.3 179 37.4
HPP92_018394 Vanilla planifolia HOM05D004001 ORTHO05D004559 2.6e-13 80.9 286 28.7
Thhalv10001303m.g Eutrema salsugineum HOM05D004001 ORTHO05D004559 5.9e-13 79.7 237 35.4
Aa31LG1G26960 Aethionema arabicum HOM05D004001 ORTHO05D004559 2.2e-12 77.8 297 30.0
COL.COLO4_12572 Corchorus olitorius HOM05D004001 ORTHO05D004559 5.0e-12 76.6 364 28.8
BraA05t19519Z Brassica rapa HOM05D004001 ORTHO05D004559 8.5e-12 75.9 273 30.8
arahy.Tifrunner.gnm1.ann1.2V3ERI Arachis hypogaea HOM05D004001 ORTHO05D004559 3.2e-11 73.9 172 37.2
arahy.Tifrunner.gnm1.ann1.63QVJR Arachis hypogaea HOM05D004001 ORTHO05D004559 9.4e-11 72.4 172 36.6
BcaC02g12205 Brassica carinata HOM05D004001 ORTHO05D004559 1.0e-09 68.9 272 29.4
arahy.Tifrunner.gnm1.ann1.XCJ58K Arachis hypogaea HOM05D004001 ORTHO05D004559 1.4e-09 68.6 289 29.1
arahy.Tifrunner.gnm1.ann1.73J9IG Arachis hypogaea HOM05D004001 ORTHO05D004559 1.8e-09 68.2 90 48.9
BolC4t22266H Brassica oleracea HOM05D004001 ORTHO05D004559 2.3e-09 67.8 361 27.1
DCAR_006876 Daucus carota HOM05D004001 ORTHO05D004559 3.9e-09 67.0 146 37.7
Gohir.A11G081700 Gossypium hirsutum HOM05D004001 ORTHO05D004559 5.1e-09 66.6 255 30.6
CSS0022656 Camellia sinensis var. sinensis HOM05D004001 ORTHO05D004559 6.7e-09 66.2 325 29.5
arahy.Tifrunner.gnm1.ann1.YQ72RL Arachis hypogaea HOM05D004001 ORTHO05D004559 1.1e-08 65.5 79 48.1
A05p05490 Brassica napus HOM05D004001 ORTHO05D004559 2.6e-08 64.3 272 28.7
SEGI_05063 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 5.7e-08 63.2 219 28.8
C04p06430 Brassica napus HOM05D004001 ORTHO05D004559 9.7e-08 62.4 308 27.6
Carub.0004s2807 Capsella rubella HOM05D004001 ORTHO05D004559 9.7e-08 62.4 297 29.0
arahy.Tifrunner.gnm1.ann1.FJEF2G Arachis hypogaea HOM05D004001 ORTHO05D004559 1.3e-07 62.0 167 35.3
Oeu005774.1 Olea europaea HOM05D004001 ORTHO05D004559 9.1e-06 55.8 159 28.9


User provided reference genes

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