Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.8e-204 715.7 363 100.0
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.4e-201 706.1 363 98.9
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.8e-167 592.8 361 80.3
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 7.0e-164 580.9 359 78.0
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 6.5e-162 574.3 354 76.8
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 1.5e-161 573.2 362 79.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.9e-161 572.8 353 75.1
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 9.4e-161 570.5 352 77.8
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 7.5e-158 560.8 354 73.4
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 5.0e-154 548.1 353 73.4
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.5e-153 545.8 354 72.6
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 1.6e-152 543.1 361 71.2
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.1e-152 542.7 353 74.2
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 2.7e-152 542.3 354 72.6
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 3.6e-152 542.0 353 73.4
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 4.7e-152 541.6 354 70.6
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.8e-151 539.7 351 74.1
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.0e-151 538.9 351 74.1
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 3.0e-151 538.9 352 75.6
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 3.0e-151 538.9 353 73.7
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 4.0e-151 538.5 363 72.2
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 8.8e-151 537.3 351 73.8
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 3.7e-149 531.9 332 74.1
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 3.7e-149 531.9 358 67.9
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.8e-148 529.6 356 69.4
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 2.0e-147 526.2 352 71.0
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.3e-146 522.7 359 69.4
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.1e-145 520.4 352 67.9
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.1e-144 516.2 354 70.1
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 2.3e-143 512.7 460 56.3
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 3.0e-143 512.3 352 66.8
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 5.2e-143 511.5 354 66.1
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 5.2e-143 511.5 358 66.2
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.2e-142 510.4 351 67.5
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 7.5e-142 507.7 358 66.5
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.3e-141 506.9 358 66.2
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 4.9e-141 505.0 352 64.8
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 6.3e-141 504.6 354 67.2
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 6.3e-141 504.6 351 65.5
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.1e-140 503.8 352 67.0
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 3.1e-140 502.3 354 66.9
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 5.4e-140 501.5 360 61.4
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 5.4e-140 501.5 351 65.5
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.2e-139 500.4 388 61.6
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 2.7e-139 499.2 351 65.5
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 2.5e-137 492.7 361 62.9
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 4.9e-133 478.4 416 57.2
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 3.2e-132 475.7 364 60.7
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 5.4e-132 474.9 353 68.3
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.0e-132 474.6 416 57.0
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 7.3e-129 464.5 358 59.8
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.6e-128 463.4 353 63.2
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.2e-126 457.2 353 66.9
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.2e-126 457.2 353 66.9
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.8e-126 454.9 353 66.3
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.1e-124 450.7 501 49.1
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 4.1e-124 448.7 320 63.8
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.0e-122 444.1 353 58.9
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 3.0e-122 442.6 363 58.1
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.1e-121 440.7 359 57.7
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 8.1e-120 434.5 353 58.6
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 8.3e-117 424.5 355 59.4
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.9e-116 423.3 457 50.5
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.1e-100 370.9 286 61.9
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 3.0e-98 362.8 195 84.1
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 7.1e-92 341.7 208 74.5
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 4.0e-87 325.9 231 65.4
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 6.0e-83 312.0 292 52.7
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 2.3e-82 310.1 219 69.9
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 5.6e-81 305.4 363 41.6
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.3e-79 298.9 358 43.0
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 5.1e-74 282.3 344 46.8
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 4.8e-64 249.2 167 66.5
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 9.1e-63 245.0 233 49.8
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.0e-61 241.5 148 68.2
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 2.4e-55 220.3 250 48.8
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 9.1e-55 218.4 140 68.6
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.1e-49 201.4 357 34.2
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 2.0e-46 190.7 161 66.5
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.0e-42 178.3 116 69.0
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 7.7e-38 162.2 111 73.9
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 7.2e-36 155.6 423 27.9
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.7e-32 143.3 398 28.9
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.6e-27 127.9 104 62.5
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.7e-27 126.3 108 53.7
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.8e-26 122.5 70 75.7
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 8.9e-26 122.1 70 70.0
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 8.9e-26 122.1 70 70.0
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 2.0e-25 120.9 69 73.9
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.7e-22 110.5 68 73.5
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.5e-22 110.2 68 72.1
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.5e-22 110.2 103 53.4
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.5e-22 110.2 124 41.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.0e-21 108.6 68 72.1
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.0e-21 108.6 58 75.9
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.9e-21 107.1 68 72.1
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-19 101.7 114 50.0
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.6e-19 101.3 292 27.4
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 4.4e-17 93.2 197 39.6
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 9.8e-17 92.0 57 78.9
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.2e-16 90.9 89 53.9
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.4e-15 87.4 74 62.2
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.7e-13 81.3 49 69.4
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 6.6e-13 79.3 98 56.1
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.8e-10 71.2 49 61.2
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.0e-10 70.1 164 31.1
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.0e-10 70.1 94 38.3
arahy.Tifrunner.gnm1.ann1.XAPW6D Arachis hypogaea HOM05D000023 ORTHO05D009998 8.3e-08 62.4 31 83.9
arahy.Tifrunner.gnm1.ann1.AE4AVU Arachis hypogaea HOM05D036121 ORTHO05D084650 1.9e-07 61.2 40 70.0


User provided reference genes

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