Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 7.1e-35 150.2 85 100.0
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 1.6e-34 149.1 85 98.8
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 6.2e-31 137.1 85 89.4
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 8.1e-31 136.7 85 89.4
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 1.1e-22 109.8 89 71.9
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 1.4e-22 109.4 88 72.7
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.8e-22 109.0 89 71.9
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 1.8e-22 109.0 81 75.3
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 2.0e-21 105.5 89 69.7
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 2.1e-18 95.5 87 66.7
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 1.8e-17 92.4 64 78.1
TPR.G23959 Trifolium pratense HOM05D005842 ORTHO05D007077 3.3e-16 88.2 60 78.3
Lalb_Chr03g0036861 Lupinus albus HOM05D005842 ORTHO05D007077 5.7e-16 87.4 64 75.0
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 1.2e-13 79.7 141 45.4
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 2.9e-12 75.1 127 43.3
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 3.8e-12 74.7 85 54.1
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.6e-10 69.3 85 56.5
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 2.1e-10 68.9 84 48.8
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 2.7e-10 68.6 85 50.6
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.0e-09 66.6 83 54.2
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 1.0e-09 66.6 89 48.3
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.4e-09 66.2 87 54.0
Medtr1g045950 Medicago truncatula HOM05D005842 ORTHO05D007077 1.4e-09 66.2 38 81.6
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 2.3e-09 65.5 88 47.7
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 3.0e-09 65.1 85 51.8
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 3.0e-09 65.1 83 50.6
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 8.8e-09 63.5 89 46.1
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.1e-08 63.2 87 47.1
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 1.5e-08 62.8 87 46.0
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.5e-08 62.8 85 50.6
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.5e-08 62.8 83 54.2
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 1.9e-08 62.4 87 44.8
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 2.5e-08 62.0 89 44.9
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 3.3e-08 61.6 60 58.3
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 5.7e-08 60.8 85 50.6
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 5.7e-08 60.8 83 49.4
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 5.7e-08 60.8 83 51.8
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 9.7e-08 60.1 88 44.3
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 1.3e-07 59.7 85 49.4
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 1.3e-07 59.7 85 49.4
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.3e-07 59.7 83 53.0
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.7e-07 59.3 83 51.8
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 2.2e-07 58.9 69 49.3
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 4.8e-07 57.8 88 47.7
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.3e-07 57.4 83 47.0
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 8.2e-07 57.0 84 46.4
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 8.2e-07 57.0 67 47.8
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 1.1e-06 56.6 89 50.6
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 1.1e-06 56.6 89 50.6
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 1.1e-06 56.6 89 50.6
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 1.1e-06 56.6 89 50.6
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 1.1e-06 56.6 89 50.6
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 1.1e-06 56.6 89 50.6
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 1.1e-06 56.6 89 50.6
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 1.1e-06 56.6 89 50.6
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.4e-06 56.2 88 43.2
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 1.8e-06 55.8 84 46.4
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 1.8e-06 55.8 67 52.2
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.8e-06 55.8 81 46.9
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 2.4e-06 55.5 83 47.0
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 3.1e-06 55.1 92 45.7
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 3.1e-06 55.1 88 43.2
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 3.1e-06 55.1 88 43.2
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 3.1e-06 55.1 85 44.7
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 3.1e-06 55.1 85 44.7
FvH4_3g44490 Fragaria vesca HOM05D010780 ORTHO05D010461 6.9e-06 53.9 30 86.7
FAN11G4005 Fragaria x ananassa HOM05D010780 ORTHO05D010461 6.9e-06 53.9 30 86.7
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 6.9e-06 53.9 85 44.7
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 9.1e-06 53.5 71 43.7
FAN25G2315 Fragaria x ananassa HOM05D010780 ORTHO05D010461 9.1e-06 53.5 35 74.3


User provided reference genes

Program Settings