Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LRB7BH Arachis hypogaea HOM05D004677 ORTHO05D005746 1.2e-43 179.9 118 100.0
arahy.Tifrunner.gnm1.ann1.G1NRGV Arachis hypogaea HOM05D004677 ORTHO05D005746 1.9e-33 146.0 100 90.0
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 1.4e-28 129.8 105 79.0
arahy.Tifrunner.gnm1.ann1.4KWR91 Arachis hypogaea HOM05D004677 ORTHO05D082370 2.2e-18 95.9 70 75.7
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 1.9e-17 92.8 107 52.3
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 1.2e-16 90.1 69 68.1
arahy.Tifrunner.gnm1.ann1.B7RHXH Arachis hypogaea HOM05D004677 ORTHO05D005746 1.8e-15 86.3 66 83.3
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 3.0e-15 85.5 69 65.2
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 8.1e-13 77.4 69 59.4
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 2.4e-12 75.9 70 57.1
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 3.1e-12 75.5 72 58.3
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 4.0e-12 75.1 143 37.1
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 4.0e-12 75.1 69 55.1
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.0e-12 75.1 69 55.1
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.0e-12 75.1 69 55.1
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 4.0e-12 75.1 69 55.1
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 5.3e-12 74.7 69 60.9
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 5.3e-12 74.7 70 60.0
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 6.9e-12 74.3 69 59.4
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 6.9e-12 74.3 69 60.9
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 6.9e-12 74.3 70 60.0
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 9.0e-12 73.9 70 60.0
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 9.0e-12 73.9 70 58.6
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.2e-11 73.6 69 53.6
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 1.5e-11 73.2 69 56.5
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 2.0e-11 72.8 69 59.4
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 2.0e-11 72.8 98 43.9
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 2.0e-11 72.8 70 58.6
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 2.0e-11 72.8 70 60.0
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 4.5e-11 71.6 70 58.6
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 5.8e-11 71.2 69 59.4
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 5.8e-11 71.2 69 58.0
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 5.8e-11 71.2 69 58.0
MD17G1099200 Malus domestica HOM05D004677 ORTHO05D005746 5.8e-11 71.2 72 56.9
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 5.8e-11 71.2 69 58.0
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 7.6e-11 70.9 69 56.5
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 7.6e-11 70.9 70 57.1
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 9.9e-11 70.5 69 52.2
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 9.9e-11 70.5 69 52.2
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 9.9e-11 70.5 69 52.2
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 1.7e-10 69.7 70 55.7
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 1.7e-10 69.7 69 56.5
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 2.2e-10 69.3 69 58.0
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 2.2e-10 69.3 61 57.4
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 2.9e-10 68.9 73 54.8
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 4.9e-10 68.2 69 55.1
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 4.9e-10 68.2 70 55.7
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 4.9e-10 68.2 69 53.6
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 6.4e-10 67.8 76 51.3
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 6.4e-10 67.8 69 56.5
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 6.4e-10 67.8 68 54.4
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 8.4e-10 67.4 67 58.2
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 8.4e-10 67.4 61 55.7
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 1.1e-09 67.0 68 57.4
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 1.1e-09 67.0 68 57.4
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 1.4e-09 66.6 68 55.9
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 1.4e-09 66.6 68 51.5
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 1.4e-09 66.6 68 55.9
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 1.4e-09 66.6 68 55.9
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 1.4e-09 66.6 60 56.7
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 1.4e-09 66.6 60 55.0
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 1.4e-09 66.6 67 56.7
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 1.9e-09 66.2 68 54.4
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 1.9e-09 66.2 68 54.4
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 1.9e-09 66.2 69 55.1
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 2.4e-09 65.9 69 53.6
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 4.2e-09 65.1 65 56.9
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 5.5e-09 64.7 67 53.7
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 7.1e-09 64.3 67 53.7
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 9.3e-09 63.9 69 53.6
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 9.3e-09 63.9 69 53.6
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 9.3e-09 63.9 70 50.0
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 9.3e-09 63.9 65 47.7
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 9.3e-09 63.9 65 55.4
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 1.2e-08 63.5 61 50.8
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 1.6e-08 63.2 68 54.4
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 1.6e-08 63.2 68 54.4
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 1.6e-08 63.2 68 54.4
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 1.6e-08 63.2 68 54.4
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 1.6e-08 63.2 69 49.3
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 2.1e-08 62.8 68 52.9
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 2.7e-08 62.4 70 50.0
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 2.7e-08 62.4 59 52.5
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 2.7e-08 62.4 71 47.9
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 3.5e-08 62.0 67 50.7
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 3.5e-08 62.0 67 50.7
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 3.5e-08 62.0 70 51.4
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 3.5e-08 62.0 69 47.8
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 6.0e-08 61.2 66 50.0
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 6.0e-08 61.2 69 47.8
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 6.0e-08 61.2 69 47.8
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 6.0e-08 61.2 70 48.6
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 7.9e-08 60.8 67 46.3
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 1.0e-07 60.5 65 49.2
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 1.3e-07 60.1 59 54.2
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 1.3e-07 60.1 59 54.2
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 1.3e-07 60.1 59 54.2
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 1.3e-07 60.1 116 31.9
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 1.8e-07 59.7 59 52.5
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 1.8e-07 59.7 60 48.3
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 1.8e-07 59.7 59 52.5
DCAR_013148 Daucus carota HOM05D004677 ORTHO05D005746 3.0e-07 58.9 69 44.9
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 3.0e-07 58.9 68 50.0
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 5.1e-07 58.2 27 92.6
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 5.1e-07 58.2 61 44.3
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 6.7e-07 57.8 85 40.0
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 6.7e-07 57.8 61 50.8
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 6.7e-07 57.8 69 46.4
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 6.7e-07 57.8 61 47.5
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 1.1e-06 57.0 40 60.0
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 1.5e-06 56.6 67 47.8
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 1.5e-06 56.6 66 40.9
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 1.9e-06 56.2 59 50.8
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 1.9e-06 56.2 63 47.6
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 2.5e-06 55.8 27 88.9
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 2.5e-06 55.8 70 42.9
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 3.3e-06 55.5 67 49.3
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 5.6e-06 54.7 65 46.2
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 7.4e-06 54.3 71 42.3


User provided reference genes

Program Settings