Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LRB6U9 Arachis hypogaea HOM05D003493 ORTHO05D003980 8.6e-168 593.6 299 100.0
arahy.Tifrunner.gnm1.ann1.Y1U1WE Arachis hypogaea HOM05D003493 ORTHO05D003980 8.1e-126 454.1 297 83.2
arahy.Tifrunner.gnm1.ann1.W0PAIX Arachis hypogaea HOM05D003493 ORTHO05D003980 3.5e-105 385.6 539 48.1
arahy.Tifrunner.gnm1.ann1.K1F8KI Arachis hypogaea HOM05D003493 ORTHO05D003980 5.8e-100 368.2 581 44.4
arahy.Tifrunner.gnm1.ann1.28MV8S Arachis hypogaea HOM05D003493 ORTHO05D003980 7.4e-87 324.7 228 79.4
arahy.Tifrunner.gnm1.ann1.PSQB2R Arachis hypogaea HOM05D003493 ORTHO05D003980 2.0e-79 300.1 151 100.0
arahy.Tifrunner.gnm1.ann1.AF40JB Arachis hypogaea HOM05D003493 ORTHO05D003980 9.7e-79 297.7 151 98.7
Glyma.16G209600 Glycine max HOM05D003493 ORTHO05D003980 4.0e-64 249.2 529 35.5
Medtr6g066300 Medicago truncatula HOM05D003493 ORTHO05D003980 1.2e-63 247.7 518 35.1
Lj2g0009881 Lotus japonicus HOM05D003493 ORTHO05D003980 5.7e-63 245.4 533 35.1
Glyma.09G160200 Glycine max HOM05D003493 ORTHO05D003980 4.8e-62 242.3 530 36.0
Phvul.004G135600 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 4.5e-60 235.7 529 34.2
Lalb_Chr14g0370061 Lupinus albus HOM05D003493 ORTHO05D003980 5.9e-60 235.3 535 34.8
TPR.G8860 Trifolium pratense HOM05D003493 ORTHO05D003980 1.0e-59 234.6 522 33.5
VMungo0464G0665 Vigna mungo HOM05D003493 ORTHO05D003980 7.2e-58 228.4 528 33.3
Glyma.10G174700 Glycine max HOM05D003493 ORTHO05D003980 9.4e-58 228.0 503 35.6
VMungo0720G0805 Vigna mungo HOM05D003493 ORTHO05D003980 4.4e-55 219.2 500 35.0
Phvul.L006701 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 5.7e-55 218.8 505 34.5
arahy.Tifrunner.gnm1.ann1.ZVJ3VC Arachis hypogaea HOM05D003493 ORTHO05D003980 2.2e-54 216.9 503 33.6
Lj5g0000329 Lotus japonicus HOM05D003493 ORTHO05D003980 7.0e-53 211.8 532 32.7
Psat1g117720 Pisum sativum HOM05D003493 ORTHO05D003980 9.1e-53 211.5 570 31.1
Lalb_Chr21g0311711 Lupinus albus HOM05D003493 ORTHO05D003980 8.6e-51 204.9 528 32.6
Hma1.2p1_0807F.1_g221460 Hydrangea macrophylla HOM05D003493 ORTHO05D003980 1.5e-50 204.1 527 31.7
Prupe.5G246400 Prunus persica HOM05D003493 ORTHO05D003980 2.5e-50 203.4 532 31.0
Lalb_Chr06g0168711 Lupinus albus HOM05D003493 ORTHO05D003980 1.2e-49 201.1 540 32.0
MD14G1000100 Malus domestica HOM05D003493 ORTHO05D003980 1.2e-49 201.1 532 30.3
CiPaw.16G076700 Carya illinoinensis HOM05D003493 ORTHO05D003980 6.1e-49 198.7 533 31.1
Cfa017818 Carpinus fangiana HOM05D003493 ORTHO05D003980 1.8e-48 197.2 507 31.6
QL10p036794 Quercus lobata HOM05D003493 ORTHO05D003980 2.3e-48 196.8 521 31.3
QL10p035454 Quercus lobata HOM05D003493 ORTHO05D003980 6.8e-48 195.3 521 31.1
RcHm_v2.0_Chr7g0176841 Rosa chinensis HOM05D003493 ORTHO05D003980 1.5e-47 194.1 531 31.1
Haze_18391 Corylus avellana HOM05D003493 ORTHO05D003980 2.6e-47 193.4 527 30.2
FAN04G2252 Fragaria x ananassa HOM05D003493 ORTHO05D003980 2.8e-46 189.9 534 30.0
CSS0005530 Camellia sinensis var. sinensis HOM05D003493 ORTHO05D003980 3.7e-46 189.5 533 31.0
Medtr1g077470 Medicago truncatula HOM05D003493 ORTHO05D003980 4.9e-46 189.1 517 32.1
FvH4_5g18670 Fragaria vesca HOM05D003493 ORTHO05D003980 8.3e-46 188.3 540 29.8
FAN08G2984 Fragaria x ananassa HOM05D003493 ORTHO05D003980 3.1e-45 186.4 532 30.5
FAN18G2761 Fragaria x ananassa HOM05D003493 ORTHO05D003980 3.1e-45 186.4 540 29.8
Dinv11742 Davidia involucrata HOM05D003493 ORTHO05D003980 7.0e-45 185.3 510 31.0
Actinidia06838 Actinidia chinensis HOM05D003493 ORTHO05D003980 3.5e-44 183.0 531 29.9
arahy.Tifrunner.gnm1.ann1.HH6FHR Arachis hypogaea HOM05D003493 ORTHO05D003980 4.5e-44 182.6 90 100.0
Thecc.06G006900 Theobroma cacao HOM05D003493 ORTHO05D003980 5.9e-44 182.2 515 30.1
Atru.chr9.57 Acer truncatum HOM05D003493 ORTHO05D003980 7.8e-44 181.8 526 30.0
TPR.G8876 Trifolium pratense HOM05D003493 ORTHO05D003980 1.3e-43 181.0 516 31.8
Manes.02G118200 Manihot esculenta HOM05D003493 ORTHO05D003980 5.0e-43 179.1 527 29.4
arahy.Tifrunner.gnm1.ann1.W71D15 Arachis hypogaea HOM05D003493 ORTHO05D003980 8.6e-43 178.3 557 29.3
CANSAT80G2441 Cannabis sativa HOM05D003493 ORTHO05D003980 2.5e-42 176.8 515 29.5
PSO063G3260 Papaver somniferum HOM05D003493 ORTHO05D003980 2.5e-42 176.8 522 29.1
Psat6g054360 Pisum sativum HOM05D003493 ORTHO05D003980 3.3e-42 176.4 527 30.9
arahy.Tifrunner.gnm1.ann1.I3UW9X Arachis hypogaea HOM05D003493 ORTHO05D003980 9.5e-42 174.9 125 75.2
HanXRQChr15g0492171 Helianthus annuus HOM05D003493 ORTHO05D003980 1.2e-41 174.5 490 29.4
PSO782G2561 Papaver somniferum HOM05D003493 ORTHO05D003980 1.2e-41 174.5 522 29.3
ECA232G4824 Erigeron canadensis HOM05D003493 ORTHO05D003980 3.6e-41 172.9 507 29.4
Lsat_1_v5_gn_0_10721 Lactuca sativa HOM05D003493 ORTHO05D003980 4.7e-41 172.6 506 29.2
Manes.01G159600 Manihot esculenta HOM05D003493 ORTHO05D003980 6.1e-41 172.2 526 30.2
Sabra17G0126700 Salix brachista HOM05D003493 ORTHO05D003980 8.0e-41 171.8 529 28.9
GSVIVG01024229001 Vitis vinifera HOM05D003493 ORTHO05D003980 1.0e-40 171.4 517 30.6
TWI81G0199 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 1.8e-40 170.6 529 28.9
Potri.017G155000 Populus trichocarpa HOM05D003493 ORTHO05D003980 3.1e-40 169.9 530 29.6
Eucgr.H00671 Eucalyptus grandis HOM05D003493 ORTHO05D003980 4.0e-40 169.5 512 28.9
TAR622G0755 Trochodendron aralioides HOM05D003493 ORTHO05D003980 4.0e-40 169.5 527 29.6
Duzib192G0928 Durio zibethinus HOM05D003493 ORTHO05D003980 5.2e-40 169.1 520 29.6
PGR083G2526 Punica granatum HOM05D003493 ORTHO05D003980 2.0e-39 167.2 515 28.2
TWI36G1567 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 5.8e-39 165.6 530 27.7
Sopen03g029860 Solanum pennellii HOM05D003493 ORTHO05D003980 7.5e-39 165.2 523 28.5
AUR62041605 Chenopodium quinoa HOM05D003493 ORTHO05D003980 2.2e-38 163.7 508 29.5
Ca_09923_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 2.2e-38 163.7 470 31.5
Solyc03g019770.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 2.2e-38 163.7 523 28.5
CARHR066210 Cardamine hirsuta HOM05D003493 ORTHO05D003980 2.9e-38 163.3 512 27.9
Gohir.D05G112200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 2.9e-38 163.3 524 27.7
Gorai.009G116400 Gossypium raimondii HOM05D003493 ORTHO05D003980 2.9e-38 163.3 514 27.8
Sc12g0007780 Simmondsia chinensis HOM05D003493 ORTHO05D003980 3.7e-38 162.9 516 29.1
Peaxi162Scf00643g00431 Petunia axillaris HOM05D003493 ORTHO05D003980 4.9e-38 162.5 510 28.0
Ca_25303_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 1.1e-37 161.4 148 55.4
Sed0011518 Sechium edule HOM05D003493 ORTHO05D003980 1.1e-37 161.4 521 27.4
A06p13880 Brassica napus HOM05D003493 ORTHO05D003980 1.4e-37 161.0 507 28.2
Duzib235G1490 Durio zibethinus HOM05D003493 ORTHO05D003980 1.4e-37 161.0 517 28.4
Gohir.A05G111700 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.4e-37 161.0 514 27.6
Gohir.A06G181400 Gossypium hirsutum HOM05D003493 ORTHO05D003980 3.2e-37 159.8 512 28.5
AL2G32970 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 5.4e-37 159.1 519 28.3
Carub.0002s1999 Capsella rubella HOM05D003493 ORTHO05D003980 7.0e-37 158.7 521 28.0
HanXRQChr08g0220881 Helianthus annuus HOM05D003493 ORTHO05D003980 7.0e-37 158.7 511 27.6
BraA06t24529Z Brassica rapa HOM05D003493 ORTHO05D003980 1.2e-36 157.9 511 27.8
Lj5A169T97 Lonicera japonica HOM05D003493 ORTHO05D003980 1.2e-36 157.9 492 29.1
Lj9A410T67 Lonicera japonica HOM05D003493 ORTHO05D003980 1.2e-36 157.9 532 28.9
Nitab4.5_0004170g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 2.0e-36 157.1 526 28.1
Gohir.D06G188200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 2.7e-36 156.8 512 28.3
Gorai.010G220600 Gossypium raimondii HOM05D003493 ORTHO05D003980 2.7e-36 156.8 512 28.3
Sp5g28170 Schrenkiella parvula HOM05D003493 ORTHO05D003980 2.7e-36 156.8 516 26.9
arahy.Tifrunner.gnm1.ann1.3LZL4F Arachis hypogaea HOM05D003493 ORTHO05D003980 4.6e-36 156.0 80 96.2
BraA07t31464Z Brassica rapa HOM05D003493 ORTHO05D003980 4.6e-36 156.0 500 27.6
AT1G73200 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 6.0e-36 155.6 519 28.1
A07p39150 Brassica napus HOM05D003493 ORTHO05D003980 7.8e-36 155.2 499 27.5
Aa31LG7G2640 Aethionema arabicum HOM05D003493 ORTHO05D003980 1.0e-35 154.8 537 26.8
Aa31LG4G3480 Aethionema arabicum HOM05D003493 ORTHO05D003980 1.3e-35 154.5 520 26.7
BolC6t39773H Brassica oleracea HOM05D003493 ORTHO05D003980 1.7e-35 154.1 501 27.9
Carub.0001s1755 Capsella rubella HOM05D003493 ORTHO05D003980 2.3e-35 153.7 504 26.8
CARHR018430 Cardamine hirsuta HOM05D003493 ORTHO05D003980 2.3e-35 153.7 516 26.9
C06p47340 Brassica napus HOM05D003493 ORTHO05D003980 3.0e-35 153.3 500 27.6
Thhalv10006829m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 3.9e-35 152.9 513 26.5
AL1G30180 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 5.0e-35 152.5 508 27.2
ClCG01G014650 Citrullus lanatus HOM05D003493 ORTHO05D003980 6.6e-35 152.1 513 26.9
Nitab4.5_0000477g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 6.6e-35 152.1 527 26.6
BolC5t30322H Brassica oleracea HOM05D003493 ORTHO05D003980 1.1e-34 151.4 511 26.6
Migut.O00291 Erythranthe guttata HOM05D003493 ORTHO05D003980 1.5e-34 151.0 511 27.8
Nitab4.5_0000854g0120 Nicotiana tabacum HOM05D003493 ORTHO05D003980 2.5e-34 150.2 522 26.8
C05p16200 Brassica napus HOM05D003493 ORTHO05D003980 3.3e-34 149.8 504 27.6
MBI06_g37980_MAGBIO Magnolia biondii HOM05D003493 ORTHO05D003980 3.3e-34 149.8 532 28.4
BcaB07g34006 Brassica carinata HOM05D003493 ORTHO05D003980 1.2e-33 147.9 497 27.4
Sp1g15900 Schrenkiella parvula HOM05D003493 ORTHO05D003980 1.2e-33 147.9 515 26.6
Aqoxy3G04358 Aquilegia oxysepala HOM05D003493 ORTHO05D003980 1.6e-33 147.5 530 26.8
EL10Ac8g19467 Beta vulgaris HOM05D003493 ORTHO05D003980 1.6e-33 147.5 164 50.0
A02p18540 Brassica napus HOM05D003493 ORTHO05D003980 1.6e-33 147.5 516 27.7
C02p30730 Brassica napus HOM05D003493 ORTHO05D003980 1.6e-33 147.5 506 27.3
BraA02t06893Z Brassica rapa HOM05D003493 ORTHO05D003980 3.6e-33 146.4 506 27.5
SalBow5G1620 Salvia bowleyana HOM05D003493 ORTHO05D003980 6.2e-33 145.6 526 27.0
BolC2t09128H Brassica oleracea HOM05D003493 ORTHO05D003980 8.0e-33 145.2 504 27.2
Zm00001eb190790 Zea mays HOM05D003493 ORTHO05D003980 8.0e-33 145.2 527 26.9
CAN.G65.58 Capsicum annuum HOM05D003493 ORTHO05D003980 1.1e-32 144.8 526 26.8
AUR62040635 Chenopodium quinoa HOM05D003493 ORTHO05D003980 1.1e-32 144.8 167 51.5
A09p60190 Brassica napus HOM05D003493 ORTHO05D003980 2.3e-32 143.7 487 27.3
BraA09t41388Z Brassica rapa HOM05D003493 ORTHO05D003980 2.3e-32 143.7 487 26.3
C08p43630 Brassica napus HOM05D003493 ORTHO05D003980 4.0e-32 142.9 490 27.1
BolC8t51909H Brassica oleracea HOM05D003493 ORTHO05D003980 4.0e-32 142.9 490 27.1
Peaxi162Scf01390g00035 Petunia axillaris HOM05D003493 ORTHO05D003980 6.8e-32 142.1 520 27.7
THA.LOC104812198 Tarenaya hassleriana HOM05D003493 ORTHO05D003980 6.8e-32 142.1 518 26.6
CiPaw.15G108700 Carya illinoinensis HOM05D003493 ORTHO05D003980 1.5e-31 141.0 141 50.4
BcaNung05482 Brassica carinata HOM05D003493 ORTHO05D003980 4.4e-31 139.4 491 27.1
MELO3C002186.2 Cucumis melo HOM05D003493 ORTHO05D003980 7.5e-31 138.7 523 27.2
ATR0124G004 Amborella trichopoda HOM05D003493 ORTHO05D003980 9.8e-31 138.3 542 26.6
MSTRG.23219 Avicennia marina HOM05D003493 ORTHO05D003980 9.8e-31 138.3 539 27.3
CAN.G861.8 Capsicum annuum HOM05D003493 ORTHO05D003980 9.8e-31 138.3 577 25.8
vmacro17772 Vaccinium macrocarpon HOM05D003493 ORTHO05D003980 9.8e-31 138.3 135 55.6
CDE07G1702 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 1.3e-30 137.9 498 27.3
Ciclev10019478m.g Citrus clementina HOM05D003493 ORTHO05D003980 1.3e-30 137.9 165 47.3
CsaV3_1G007680 Cucumis sativus L. HOM05D003493 ORTHO05D003980 1.3e-30 137.9 517 25.9
Sopen06g028400 Solanum pennellii HOM05D003493 ORTHO05D003980 2.2e-30 137.1 525 25.5
BcaC07g41354 Brassica carinata HOM05D003493 ORTHO05D003980 2.9e-30 136.7 514 26.5
Thhalv10018153m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 2.9e-30 136.7 522 25.7
Solyc06g072110.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 3.7e-30 136.3 525 26.5
Zm00001eb228970 Zea mays HOM05D003493 ORTHO05D003980 3.7e-30 136.3 487 27.9
Oeu063704.1 Olea europaea HOM05D003493 ORTHO05D003980 4.9e-30 136.0 526 27.2
Nitab4.5_0003367g0050 Nicotiana tabacum HOM05D003493 ORTHO05D003980 6.4e-30 135.6 481 27.4
Potri.018G152400 Populus trichocarpa HOM05D003493 ORTHO05D003980 5.4e-29 132.5 195 44.1
Gohir.A05G111401 Gossypium hirsutum HOM05D003493 ORTHO05D003980 7.0e-29 132.1 190 43.7
CDE04G1302 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 1.6e-28 131.0 514 26.5
Cc04_g13620 Coffea canephora HOM05D003493 ORTHO05D003980 3.5e-28 129.8 170 44.7
FAN13G0815 Fragaria x ananassa HOM05D003493 ORTHO05D003980 1.1e-26 124.8 233 36.1
PGSC0003DMG400015207 Solanum tuberosum HOM05D003493 ORTHO05D003980 1.1e-26 124.8 196 40.3
Nn3g18516 Nelumbo nucifera HOM05D003493 ORTHO05D003980 1.9e-26 124.0 165 47.3
Os02g0827500 Oryza sativa ssp. japonica HOM05D003493 ORTHO05D003980 1.9e-26 124.0 187 41.2
Oeu034417.1 Olea europaea HOM05D003493 ORTHO05D003980 2.5e-26 123.6 150 50.7
AT1G17820 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 1.6e-25 120.9 172 41.3
SGA_v2.0_scaffold25G10715 Striga asiatica HOM05D003493 ORTHO05D003980 1.6e-25 120.9 91 61.5
arahy.Tifrunner.gnm1.ann1.XZC4F6 Arachis hypogaea HOM05D003493 ORTHO05D003980 3.6e-25 119.8 245 39.6
PGSC0003DMG400027062 Solanum tuberosum HOM05D003493 ORTHO05D003980 6.2e-25 119.0 191 41.4
COL.COLO4_22900 Corchorus olitorius HOM05D003493 ORTHO05D003980 1.2e-23 114.8 137 49.6
DCAR_011394 Daucus carota HOM05D003493 ORTHO05D003980 1.7e-22 110.9 149 42.3
arahy.Tifrunner.gnm1.ann1.XN9UYN Arachis hypogaea HOM05D003493 ORTHO05D003980 5.4e-21 105.9 52 90.4
arahy.Tifrunner.gnm1.ann1.PE1W7W Arachis hypogaea HOM05D003493 ORTHO05D003980 1.3e-19 101.3 52 86.5
DCAR_011395 Daucus carota HOM05D003493 ORTHO05D003980 6.2e-17 92.4 68 58.8
Cpa.g.c34760 Carica papaya HOM05D003493 ORTHO05D003980 1.1e-16 91.7 65 58.5
SEGI_25111 Sequoiadendron giganteum HOM05D003493 ORTHO05D003980 8.9e-16 88.6 232 34.9
AagrBONN_evm.TU.Sc2ySwM_368.2475 Anthoceros agrestis HOM05D003493 ORTHO05D003980 1.2e-15 88.2 168 34.5
Oeu034418.1 Olea europaea HOM05D003493 ORTHO05D003980 3.4e-15 86.7 71 56.3
SMO361G0167 Selaginella moellendorffii HOM05D003493 ORTHO05D003980 3.4e-15 86.7 158 34.2
Mapoly0036s0110 Marchantia polymorpha HOM05D003493 ORTHO05D003980 3.8e-14 83.2 198 30.3
Pp3c1_25660 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.4e-13 81.3 291 27.5
Pp3c5_12280 Physcomitrium patens HOM05D003493 ORTHO05D003980 4.6e-12 76.3 209 28.2
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 7.8e-12 75.5 80 51.2
Pp3c6_14220 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.0e-11 75.1 160 31.2
AUR62040636 Chenopodium quinoa HOM05D003493 ORTHO05D003980 6.6e-11 72.4 80 50.0
Pp3c14_11980 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.1e-10 71.6 167 31.1
Pp3c17_10430 Physcomitrium patens HOM05D003493 ORTHO05D003980 2.8e-09 67.0 244 27.9
Hund06742 Selenicereus undatus HOM05D003493 ORTHO05D001641 5.8e-07 59.3 67 43.3


User provided reference genes

Program Settings