Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LQS8H1 Arachis hypogaea HOM05D005889 ORTHO05D007495 2.4e-67 259.2 184 100.0
arahy.Tifrunner.gnm1.ann1.XH0R3V Arachis hypogaea HOM05D005889 ORTHO05D007495 5.8e-66 254.6 185 99.5
Glyma.13G070100 Glycine max HOM05D005889 ORTHO05D007495 3.4e-34 149.1 95 83.2
CiPaw.03G035200 Carya illinoinensis HOM05D005889 ORTHO05D007495 1.3e-33 147.1 97 82.5
Medtr6g007887 Medicago truncatula HOM05D005889 ORTHO05D007495 3.8e-33 145.6 186 56.5
Phvul.004G019800 Phaseolus vulgaris HOM05D005889 ORTHO05D007495 6.5e-33 144.8 186 55.4
VMungo0464G2061 Vigna mungo HOM05D001690 ORTHO05D002627 1.1e-32 144.1 95 81.1
Eucgr.J02175 Eucalyptus grandis HOM05D005889 ORTHO05D007495 1.9e-32 143.3 91 83.5
Glyma.19G012900 Glycine max HOM05D005889 ORTHO05D007495 1.9e-32 143.3 95 78.9
Ca_04220_v3 Cicer arietinum L. HOM05D005889 ORTHO05D007495 4.2e-32 142.1 96 76.0
Nn4g22882 Nelumbo nucifera HOM05D005889 ORTHO05D007495 5.5e-32 141.7 98 76.5
MD17G1039100 Malus domestica HOM05D005889 ORTHO05D007495 7.2e-32 141.4 92 79.3
Prupe.3G279900 Prunus persica HOM05D005889 ORTHO05D007495 9.3e-32 141.0 92 79.3
CSS0022009 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 1.6e-31 140.2 92 79.3
THA.LOC104821069 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 1.6e-31 140.2 91 81.3
Psat1g080040 Pisum sativum HOM05D005889 ORTHO05D007495 2.1e-31 139.8 191 55.5
MSTRG.15501 Avicennia marina HOM05D005889 ORTHO05D007495 2.7e-31 139.4 91 80.2
CANSAT64G0610 Cannabis sativa HOM05D005889 ORTHO05D007495 2.7e-31 139.4 91 82.4
CANSAT64G2621 Cannabis sativa HOM05D005889 ORTHO05D007495 2.7e-31 139.4 91 82.4
CARHR198430 Cardamine hirsuta HOM05D005889 ORTHO05D007495 2.7e-31 139.4 91 79.1
Migut.K01361 Erythranthe guttata HOM05D005889 ORTHO05D007495 3.5e-31 139.0 91 79.1
Sopen02g031900 Solanum pennellii HOM05D005889 ORTHO05D007495 3.5e-31 139.0 91 79.1
PGSC0003DMG400000508 Solanum tuberosum HOM05D005889 ORTHO05D007495 3.5e-31 139.0 91 79.1
A02p02770 Brassica napus HOM05D005889 ORTHO05D007495 4.6e-31 138.7 91 78.0
A03p06840 Brassica napus HOM05D005889 ORTHO05D007495 4.6e-31 138.7 91 79.1
C03p07840 Brassica napus HOM05D005889 ORTHO05D007495 4.6e-31 138.7 91 79.1
BraA02t05248Z Brassica rapa HOM05D005889 ORTHO05D007495 4.6e-31 138.7 91 78.0
BraA03t10009Z Brassica rapa HOM05D005889 ORTHO05D007495 4.6e-31 138.7 91 79.1
PGR083G2278 Punica granatum HOM05D005889 ORTHO05D007495 4.6e-31 138.7 93 78.5
BcaB01g05094 Brassica carinata HOM05D005889 ORTHO05D007495 6.1e-31 138.3 91 78.0
BolC3t13283H Brassica oleracea HOM05D005889 ORTHO05D007495 6.1e-31 138.3 91 78.0
QL02p077702 Quercus lobata HOM05D005889 ORTHO05D007495 6.1e-31 138.3 91 78.0
Sabra16G0230000 Salix brachista HOM05D005889 ORTHO05D007495 6.1e-31 138.3 91 81.3
Ciclev10012884m.g Citrus clementina HOM05D005889 ORTHO05D007495 7.9e-31 137.9 92 76.1
Manes.17G118700 Manihot esculenta HOM05D005889 ORTHO05D007495 7.9e-31 137.9 94 80.9
Nitab4.5_0001952g0130 Nicotiana tabacum HOM05D005889 ORTHO05D007495 7.9e-31 137.9 91 78.0
Solyc02g087150.3 Solanum lycopersicum HOM05D005889 ORTHO05D007495 7.9e-31 137.9 91 78.0
Actinidia06039 Actinidia chinensis HOM05D005889 ORTHO05D007495 1.0e-30 137.5 92 77.2
BcaNung03088 Brassica carinata HOM05D005889 ORTHO05D007495 1.0e-30 137.5 91 78.0
Carub.0006s1306 Capsella rubella HOM05D005889 ORTHO05D007495 1.0e-30 137.5 91 78.0
Cfa007463 Carpinus fangiana HOM05D001690 ORTHO05D002627 1.0e-30 137.5 92 77.2
BcaNung05888 Brassica carinata HOM05D005889 ORTHO05D007495 1.3e-30 137.1 89 78.7
C02p07380 Brassica napus HOM05D005889 ORTHO05D007495 1.3e-30 137.1 89 78.7
BolC2t06669H Brassica oleracea HOM05D005889 ORTHO05D007495 1.3e-30 137.1 89 78.7
CAN.G206.53 Capsicum annuum HOM05D005889 ORTHO05D007495 1.3e-30 137.1 91 79.1
Peaxi162Scf00129g00825 Petunia axillaris HOM05D005889 ORTHO05D007495 1.3e-30 137.1 91 78.0
Rhsim10G0026400 Rhododendron simsii HOM05D005889 ORTHO05D007495 1.3e-30 137.1 92 80.4
Rhsim10G0026900 Rhododendron simsii HOM05D005889 ORTHO05D007495 1.3e-30 137.1 92 80.4
Thhalv10014795m.g Eutrema salsugineum HOM05D005889 ORTHO05D007495 1.8e-30 136.7 91 78.0
FvH4_6g50270 Fragaria vesca HOM05D005889 ORTHO05D007495 1.8e-30 136.7 92 76.1
FAN14G2248 Fragaria x ananassa HOM05D005889 ORTHO05D007495 1.8e-30 136.7 92 76.1
RcHm_v2.0_Chr2g0170581 Rosa chinensis HOM05D005889 ORTHO05D007495 1.8e-30 136.7 92 77.2
Lsat_1_v5_gn_2_92760 Lactuca sativa HOM05D005889 ORTHO05D007495 2.3e-30 136.3 92 76.1
MBI14_g19739_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 3.0e-30 136.0 91 76.9
Cc07_g02540 Coffea canephora HOM05D005889 ORTHO05D007495 3.9e-30 135.6 91 80.2
Sed0023571 Sechium edule HOM05D005889 ORTHO05D007495 3.9e-30 135.6 92 73.9
THA.LOC104822380 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 3.9e-30 135.6 89 77.5
DCAR_011198 Daucus carota HOM05D005889 ORTHO05D007495 5.1e-30 135.2 185 50.8
SalBow1G5017 Salvia bowleyana HOM05D005889 ORTHO05D007495 5.1e-30 135.2 91 78.0
TWI56G0856 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 5.1e-30 135.2 96 78.1
TAR371G1159 Trochodendron aralioides HOM05D005889 ORTHO05D007495 6.7e-30 134.8 92 77.2
AT5G14910 Arabidopsis thaliana HOM05D005889 ORTHO05D007495 8.7e-30 134.4 91 75.8
CsaV3_3G042070 Cucumis sativus L. HOM05D005889 ORTHO05D007495 8.7e-30 134.4 91 74.7
Hma1.2p1_0697F.1_g204970 Hydrangea macrophylla HOM05D005889 ORTHO05D007495 8.7e-30 134.4 91 78.0
Manes.15G180360 Manihot esculenta HOM05D005889 ORTHO05D007495 1.1e-29 134.0 91 76.9
Aqoxy3G03079 Aquilegia oxysepala HOM05D005889 ORTHO05D007495 1.5e-29 133.7 91 74.7
HanXRQChr12g0385561 Helianthus annuus HOM05D005889 ORTHO05D007495 1.5e-29 133.7 91 76.9
MELO3C009927.2 Cucumis melo HOM05D005889 ORTHO05D007495 1.9e-29 133.3 91 74.7
Lj2g0018244 Lotus japonicus HOM05D005889 ORTHO05D007495 2.5e-29 132.9 186 50.5
Thecc.04G004200 Theobroma cacao HOM05D005889 ORTHO05D007495 2.5e-29 132.9 91 76.9
Atru.chr8.2424 Acer truncatum HOM05D005889 ORTHO05D007495 3.3e-29 132.5 92 75.0
Ah.16g106950 Amaranthus hybridus HOM05D005889 ORTHO05D007495 3.3e-29 132.5 95 71.6
SGA_v2.0_scaffold205G41723 Striga asiatica HOM05D005889 ORTHO05D007495 3.3e-29 132.5 91 76.9
AUR62032095 Chenopodium quinoa HOM05D005889 ORTHO05D007495 4.3e-29 132.1 95 70.5
COL.COLO4_32001 Corchorus olitorius HOM05D005889 ORTHO05D007495 4.3e-29 132.1 91 73.6
FAN02G1209 Fragaria x ananassa HOM05D005889 ORTHO05D007495 5.7e-29 131.7 94 74.5
FAN09G4317 Fragaria x ananassa HOM05D005889 ORTHO05D007495 5.7e-29 131.7 94 74.5
Gorai.001G259800 Gossypium raimondii HOM05D005889 ORTHO05D007495 5.7e-29 131.7 91 75.8
PSO832G3377 Papaver somniferum HOM05D005889 ORTHO05D007495 7.4e-29 131.3 92 73.9
Potri.001G350500 Populus trichocarpa HOM05D005889 ORTHO05D007495 7.4e-29 131.3 90 77.8
Sc20g0002790 Simmondsia chinensis HOM05D005889 ORTHO05D007495 7.4e-29 131.3 95 73.7
TWI12G0403 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 7.4e-29 131.3 96 76.0
Gohir.D07G225400 Gossypium hirsutum HOM05D005889 ORTHO05D007495 9.7e-29 131.0 91 75.8
Sp6g29140 Schrenkiella parvula HOM05D005889 ORTHO05D007495 9.7e-29 131.0 85 78.8
FAN05G0142 Fragaria x ananassa HOM05D005889 ORTHO05D007495 1.3e-28 130.6 94 73.4
PSO063G7534 Papaver somniferum HOM05D005889 ORTHO05D007495 1.3e-28 130.6 92 73.9
ECA238G1302 Erigeron canadensis HOM05D005889 ORTHO05D007495 1.6e-28 130.2 91 74.7
Oeu047335.1 Olea europaea HOM05D005889 ORTHO05D007495 2.8e-28 129.4 87 77.0
unitig_21.g20501 Utricularia gibba HOM05D005889 ORTHO05D007495 3.7e-28 129.0 91 73.6
Duzib147G1282 Durio zibethinus HOM05D005889 ORTHO05D007495 4.8e-28 128.6 91 72.5
HanXRQChr14g0448791 Helianthus annuus HOM05D005889 ORTHO05D007495 6.3e-28 128.3 91 74.7
TWI56G0985 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 8.2e-28 127.9 91 75.8
CDE01G0491 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 1.8e-27 126.7 91 72.5
Lj7C409T13 Lonicera japonica HOM05D005889 ORTHO05D007495 3.1e-27 125.9 92 72.8
GSVIVG01032527001 Vitis vinifera HOM05D005889 ORTHO05D007495 9.0e-27 124.4 79 81.0
Hund20036 Selenicereus undatus HOM05D005889 ORTHO05D007495 2.6e-26 122.9 92 70.7
Sed0001958 Sechium edule HOM05D005889 ORTHO05D007495 3.4e-26 122.5 89 69.7
ClCG10G014500 Citrullus lanatus HOM05D005889 ORTHO05D007495 4.5e-26 122.1 91 70.3
CDE02G1560 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 7.7e-26 121.3 91 69.2
Aa31LG11G14590 Aethionema arabicum HOM05D005889 ORTHO05D007495 1.0e-25 120.9 132 55.3
vmacro05795 Vaccinium macrocarpon HOM05D005889 ORTHO05D007495 1.3e-25 120.6 115 61.7
CSS0046645 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 1.7e-25 120.2 85 74.1
MBI14_g42400_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 1.7e-25 120.2 122 57.4
CSS0028338 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 2.2e-25 119.8 85 72.9
Nitab4.5_0005206g0020 Nicotiana tabacum HOM05D005889 ORTHO05D007495 2.9e-25 119.4 91 70.3
BcaB01g05020 Brassica carinata HOM05D005889 ORTHO05D007495 1.4e-22 110.5 76 75.0
Lalb_Chr21g0319321 Lupinus albus HOM05D000340 ORTHO05D000821 1.8e-22 110.2 76 75.0
EL10Ac2g03378 Beta vulgaris HOM05D005889 ORTHO05D007495 6.7e-22 108.2 76 71.1
Os05g0337400 Oryza sativa ssp. japonica HOM05D005889 ORTHO05D007495 4.3e-21 105.5 87 62.1
Zm00001eb286710 Zea mays HOM05D005889 ORTHO05D007495 1.3e-20 104.0 87 60.9
Peaxi162Scf00700g00623 Petunia axillaris HOM05D005889 ORTHO05D007495 1.4e-19 100.5 71 73.2
Pp3c1_25290 Physcomitrium patens HOM05D005889 ORTHO05D007495 1.4e-19 100.5 86 61.6
ATR0787G083 Amborella trichopoda HOM05D005889 ORTHO05D007495 2.4e-19 99.8 71 71.8
Pp3c10_16560 Physcomitrium patens HOM05D005889 ORTHO05D007495 4.1e-19 99.0 83 60.2
Pp3c2_14600 Physcomitrium patens HOM05D005889 ORTHO05D007495 4.1e-19 99.0 84 58.3
Mapoly0034s0091 Marchantia polymorpha HOM05D005889 ORTHO05D007495 1.5e-18 97.1 84 61.9
Rhsim10G0027100 Rhododendron simsii HOM05D005889 ORTHO05D007495 1.4e-14 84.0 55 81.8
AL6G25690 Arabidopsis lyrata HOM05D005889 ORTHO05D007495 4.4e-13 79.0 56 69.6
SMO119G0369 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 3.7e-12 75.9 84 41.7
SEGI_28638 Sequoiadendron giganteum HOM05D005889 ORTHO05D007495 3.1e-11 72.8 86 47.7
Gohir.A07G218300 Gossypium hirsutum HOM05D005889 ORTHO05D007495 4.1e-11 72.4 55 67.3
CSS0042844 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 1.6e-10 70.5 54 72.2
RcHm_v2.0_Chr2g0170541 Rosa chinensis HOM05D005889 ORTHO05D007495 2.6e-10 69.7 55 70.9
TPR.G132 Trifolium pratense HOM05D005889 ORTHO05D007495 1.0e-09 67.8 44 84.1
HPP92_014818 Vanilla planifolia HOM05D005889 ORTHO05D007495 8.5e-09 64.7 54 59.3
SMO163G0046 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 2.5e-08 63.2 84 38.1
AagrBONN_evm.TU.Sc2ySwM_368.656 Anthoceros agrestis HOM05D005889 ORTHO05D007495 1.2e-07 60.8 52 55.8
Nn3g16976 Nelumbo nucifera HOM05D005889 ORTHO05D007495 4.7e-07 58.9 34 85.3
Cpa.g.sc286.7 Carica papaya HOM05D005889 ORTHO05D007495 5.2e-06 55.5 34 76.5


User provided reference genes

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