Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 2.9e-87 325.1 155 100.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.9e-87 325.1 155 100.0
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 5.5e-25 118.2 53 100.0
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 5.5e-25 118.2 53 100.0
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 5.5e-25 118.2 53 100.0
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-24 117.1 53 98.1
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-23 114.0 53 98.1
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 6.2e-21 104.8 53 81.1
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 6.2e-21 104.8 53 81.1
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 1.1e-20 104.0 52 80.8
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 3.1e-20 102.4 53 79.2
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 3.1e-20 102.4 55 76.4
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 5.3e-20 101.7 51 84.3
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 9.0e-20 100.9 51 78.4
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 9.0e-20 100.9 57 71.9
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 1.2e-19 100.5 51 78.4
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 1.5e-19 100.1 50 82.0
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 2.0e-19 99.8 51 78.4
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 2.0e-19 99.8 51 78.4
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 2.0e-19 99.8 51 78.4
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 2.6e-19 99.4 51 76.5
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 3.4e-19 99.0 52 75.0
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 3.4e-19 99.0 54 74.1
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 4.5e-19 98.6 53 77.4
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 5.8e-19 98.2 50 80.0
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 7.6e-19 97.8 50 78.0
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 7.6e-19 97.8 50 78.0
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.0e-18 97.4 51 76.5
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.0e-18 97.4 55 72.7
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 1.0e-18 97.4 51 78.4
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 1.3e-18 97.1 51 74.5
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 1.3e-18 97.1 50 78.0
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.7e-18 96.7 49 79.6
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 1.7e-18 96.7 50 78.0
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.7e-18 96.7 49 79.6
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 1.7e-18 96.7 50 78.0
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 2.2e-18 96.3 61 70.5
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 2.2e-18 96.3 51 76.5
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 2.9e-18 95.9 50 76.0
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.9e-18 95.9 51 76.5
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 2.9e-18 95.9 105 49.5
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 2.9e-18 95.9 50 76.0
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 5.0e-18 95.1 48 79.2
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 5.0e-18 95.1 48 79.2
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 5.0e-18 95.1 48 79.2
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 5.0e-18 95.1 48 79.2
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.5e-18 94.7 50 74.0
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 6.5e-18 94.7 51 74.5
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 6.5e-18 94.7 51 74.5
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 6.5e-18 94.7 52 73.1
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 6.5e-18 94.7 51 74.5
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 6.5e-18 94.7 50 74.0
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 8.4e-18 94.4 51 78.4
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 1.1e-17 94.0 50 74.0
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 1.1e-17 94.0 52 75.0
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.1e-17 94.0 51 70.6
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.1e-17 94.0 50 78.0
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 1.4e-17 93.6 50 74.0
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 1.4e-17 93.6 50 76.0
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 1.4e-17 93.6 53 73.6
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.9e-17 93.2 52 73.1
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 1.9e-17 93.2 52 73.1
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 1.9e-17 93.2 52 73.1
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 2.5e-17 92.8 50 76.0
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 2.5e-17 92.8 50 74.0
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 2.5e-17 92.8 52 69.2
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 3.2e-17 92.4 50 72.0
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 5.5e-17 91.7 53 66.0
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 5.5e-17 91.7 50 72.0
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 7.1e-17 91.3 50 74.0
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 7.1e-17 91.3 50 74.0
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 7.1e-17 91.3 61 63.9
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 7.1e-17 91.3 50 72.0
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 9.3e-17 90.9 50 72.0
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.6e-16 90.1 50 74.0
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 2.1e-16 89.7 50 70.0
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 2.1e-16 89.7 50 72.0
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 2.7e-16 89.4 50 72.0
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 2.7e-16 89.4 47 76.6
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 4.6e-16 88.6 49 73.5
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 6.1e-16 88.2 49 77.6
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 6.1e-16 88.2 50 68.0
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 1.8e-15 86.7 49 71.4
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 3.0e-15 85.9 51 64.7
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 5.7e-14 81.6 48 66.7
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 3.7e-13 79.0 57 61.4
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 4.1e-12 75.5 42 69.0
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.7e-10 70.1 36 72.2
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 7.2e-09 64.7 51 51.0
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 1.6e-08 63.5 36 72.2
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 2.0e-06 56.6 39 61.5
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 2.5e-06 56.2 35 62.9
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 4.3e-06 55.5 29 69.0


User provided reference genes

Program Settings