Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 8.8e-179 630.2 319 100.0
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.6e-167 592.8 308 97.4
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 4.0e-123 445.3 310 73.5
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 9.9e-122 440.7 305 72.8
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.4e-120 436.8 307 73.0
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 4.6e-111 405.2 287 72.8
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 4.3e-109 398.7 310 67.4
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 7.3e-109 397.9 310 66.5
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 2.2e-105 386.3 310 63.9
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 4.3e-101 372.1 304 62.8
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 4.0e-99 365.5 304 61.8
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 1.2e-98 364.0 311 64.6
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 2.2e-97 359.8 305 60.0
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 5.5e-96 355.1 307 59.3
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 6.0e-95 351.7 313 62.0
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 7.9e-95 351.3 315 57.5
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 7.9e-95 351.3 315 57.5
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 3.0e-94 349.4 300 60.0
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 7.4e-93 344.7 305 57.7
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 3.7e-92 342.4 310 58.1
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 1.1e-91 340.9 310 57.1
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.8e-91 340.1 310 57.7
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 4.1e-91 339.0 305 57.0
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 6.9e-91 338.2 305 58.0
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 2.0e-90 336.7 305 58.7
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 4.5e-90 335.5 314 54.1
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 4.5e-90 335.5 305 57.0
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.0e-89 334.3 310 57.7
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 2.2e-89 333.2 310 57.1
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 2.9e-89 332.8 304 57.2
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 2.9e-89 332.8 305 56.1
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 3.2e-88 329.3 312 56.7
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 3.2e-88 329.3 320 55.0
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 3.2e-88 329.3 310 55.8
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.2e-87 327.4 305 55.7
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.6e-87 327.0 305 55.7
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 8.7e-86 321.2 310 54.2
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 1.1e-85 320.9 334 51.8
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.5e-85 320.5 310 55.5
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 7.4e-85 318.2 317 53.0
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.3e-84 317.4 305 52.8
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 1.6e-84 317.0 310 53.9
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 6.3e-84 315.1 307 54.7
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 8.2e-84 314.7 310 52.9
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.8e-83 313.5 305 53.4
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 3.1e-83 312.8 310 52.6
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 4.1e-83 312.4 293 57.0
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 9.0e-83 311.2 305 52.5
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.5e-82 310.5 305 52.5
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 3.4e-82 309.3 310 53.5
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 1.0e-81 307.8 305 54.4
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 1.0e-81 307.8 319 52.4
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 5.0e-81 305.4 362 46.4
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 1.1e-80 304.3 310 52.3
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 2.5e-80 303.1 311 51.1
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 3.2e-80 302.8 308 50.3
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 4.2e-80 302.4 305 52.5
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 5.5e-80 302.0 305 52.5
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 9.4e-80 301.2 305 52.5
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.2e-79 300.8 311 52.4
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 3.6e-79 299.3 311 51.8
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 4.6e-79 298.9 310 51.3
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 4.6e-79 298.9 308 51.0
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 6.1e-79 298.5 315 51.1
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 1.8e-78 297.0 306 50.7
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 2.3e-78 296.6 303 52.8
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 2.3e-78 296.6 307 51.1
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 3.9e-78 295.8 307 51.1
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 6.7e-78 295.0 310 51.0
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 2.0e-77 293.5 312 50.3
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 4.3e-77 292.4 304 52.0
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 5.7e-77 292.0 299 50.8
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 7.4e-77 291.6 305 50.8
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 9.7e-77 291.2 305 51.5
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 9.7e-77 291.2 305 51.5
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 9.7e-77 291.2 316 53.2
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 1.3e-76 290.8 310 52.6
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.7e-76 290.4 302 51.0
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 4.8e-76 288.9 310 50.6
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.4e-75 287.3 318 52.2
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 1.8e-75 287.0 299 53.2
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.2e-74 284.3 305 50.5
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 1.2e-74 284.3 310 49.4
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 2.0e-74 283.5 305 51.1
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 7.7e-74 281.6 305 50.8
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 1.7e-73 280.4 305 50.2
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 2.9e-73 279.6 310 51.3
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 2.5e-72 276.6 313 47.9
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 1.6e-71 273.9 307 48.2
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 2.3e-70 270.0 308 44.5
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 5.1e-70 268.9 302 49.0
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 9.1e-67 258.1 315 45.7
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.6e-66 257.3 315 45.7
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 7.2e-64 248.4 312 45.8
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 1.8e-62 243.8 284 45.8
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 8.8e-62 241.5 305 45.2
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.4e-53 213.0 212 54.2
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 3.4e-53 213.0 277 46.2
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 1.3e-52 211.1 240 48.3
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 7.0e-51 205.3 305 43.9
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.5e-48 197.6 200 54.0
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 3.7e-44 183.0 208 48.6
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.0e-42 177.2 176 58.5
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 1.7e-41 174.1 257 39.7
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 7.3e-40 168.7 198 51.0
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 7.8e-34 148.7 105 65.7
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 1.5e-32 144.4 120 61.7
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.5e-29 134.4 310 29.7
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.9e-27 127.5 224 38.4
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.7e-25 120.9 122 55.7
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 4.9e-20 102.8 282 27.3
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 3.2e-19 100.1 108 53.7
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 4.1e-19 99.8 116 46.6
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 4.6e-18 96.3 147 40.8
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 7.8e-18 95.5 125 43.2
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 1.7e-17 94.4 147 40.1
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 1.9e-16 90.9 147 38.8
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 2.3e-14 84.0 125 40.8
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 2.0e-13 80.9 125 40.8
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 7.6e-13 79.0 150 36.7
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 3.7e-12 76.6 249 31.7
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 2.4e-11 73.9 66 53.0
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 7.1e-11 72.4 65 53.8
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 1.3e-09 68.2 60 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 7.3e-08 62.4 114 34.2
Ca_01254_v3 Cicer arietinum L. HOM05D006244 ORTHO05D007401 5.2e-06 56.2 74 45.9


User provided reference genes

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