Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 8.5e-162 573.5 276 100.0
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 9.1e-132 473.8 263 89.0
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 3.2e-129 465.3 242 91.3
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 3.4e-126 455.3 242 87.6
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 5.7e-126 454.5 242 88.4
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.3e-125 453.4 242 92.6
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 3.7e-125 451.8 242 87.6
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 6.3e-125 451.1 240 87.5
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 9.1e-124 447.2 242 87.6
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 4.5e-123 444.9 268 81.0
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 5.9e-123 444.5 242 86.0
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 1.9e-121 439.5 237 88.2
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.8e-119 433.0 240 86.2
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 5.2e-119 431.4 238 84.5
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 5.2e-119 431.4 240 85.8
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 5.2e-119 431.4 240 85.8
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 6.8e-119 431.0 238 85.3
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 6.8e-119 431.0 242 84.7
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.5e-118 429.9 237 84.8
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 1.5e-118 429.9 240 85.4
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 2.0e-118 429.5 234 86.3
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 2.0e-118 429.5 242 82.6
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 2.6e-118 429.1 242 83.5
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 2.6e-118 429.1 237 84.4
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 4.4e-118 428.3 242 84.7
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 5.7e-118 427.9 242 83.9
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 9.8e-118 427.2 238 83.6
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 1.3e-117 426.8 238 83.2
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.7e-117 426.4 240 85.0
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.7e-117 426.4 242 82.6
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 1.7e-117 426.4 235 85.5
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 2.8e-117 425.6 237 83.5
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 4.1e-116 421.8 238 82.4
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 5.4e-116 421.4 239 81.6
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 2.0e-115 419.5 235 83.4
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 3.5e-115 418.7 237 84.4
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 4.5e-115 418.3 237 80.6
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.0e-114 417.2 237 81.4
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 1.0e-114 417.2 238 81.9
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.7e-114 416.4 234 85.0
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 2.3e-114 416.0 239 81.6
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 2.9e-114 415.6 234 85.0
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 3.8e-114 415.2 243 83.1
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 3.8e-114 415.2 242 81.0
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 3.8e-114 415.2 235 81.3
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 5.0e-114 414.8 243 83.1
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 6.6e-114 414.5 238 80.7
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 6.6e-114 414.5 242 81.8
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 6.6e-114 414.5 277 74.0
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 1.5e-113 413.3 235 81.3
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 1.5e-113 413.3 235 81.3
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 1.5e-113 413.3 234 83.3
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 1.9e-113 412.9 239 79.9
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.9e-113 412.9 234 83.3
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 2.5e-113 412.5 236 80.5
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 3.3e-113 412.1 237 81.9
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 5.6e-113 411.4 235 80.0
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 5.6e-113 411.4 234 82.9
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 7.3e-113 411.0 235 80.9
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 3.6e-112 408.7 235 79.6
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 3.6e-112 408.7 238 80.3
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 3.6e-112 408.7 235 79.1
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 6.1e-112 407.9 235 80.0
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 8.0e-112 407.5 240 79.6
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 8.0e-112 407.5 234 82.1
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 1.8e-111 406.4 244 78.3
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.8e-111 406.4 235 81.3
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 1.8e-111 406.4 234 83.8
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 3.0e-111 405.6 243 78.2
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 3.0e-111 405.6 240 79.6
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 3.0e-111 405.6 235 80.0
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 4.0e-111 405.2 224 85.3
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.0e-111 405.2 235 77.9
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 6.8e-111 404.4 249 76.3
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 8.9e-111 404.1 237 80.2
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 8.9e-111 404.1 235 77.4
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 4.4e-110 401.7 235 77.0
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 2.2e-109 399.4 242 78.5
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 2.9e-109 399.1 235 77.9
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 2.9e-109 399.1 237 82.3
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 8.3e-109 397.5 235 77.4
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 8.3e-109 397.5 235 77.4
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 1.1e-108 397.1 235 79.1
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 2.4e-108 396.0 281 71.2
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 2.4e-108 396.0 240 77.9
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 5.4e-108 394.8 240 79.2
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 4.6e-107 391.7 267 73.8
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 6.0e-107 391.3 240 76.2
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.3e-106 390.2 236 78.4
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 3.0e-106 389.0 237 76.4
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 3.0e-106 389.0 237 76.4
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 3.0e-106 389.0 222 83.8
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 3.6e-104 382.1 235 74.9
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 4.7e-104 381.7 235 74.9
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 4.7e-104 381.7 242 75.2
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 1.1e-103 380.6 253 74.3
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 1.4e-103 380.2 235 74.5
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.1e-100 370.5 238 73.9
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.4e-100 369.4 211 80.6
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 5.4e-100 368.2 199 86.9
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 1.6e-99 366.7 206 83.5
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 6.0e-99 364.8 237 71.7
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.0e-98 364.0 277 66.1
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.3e-98 363.6 200 84.0
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 1.5e-97 360.1 240 74.2
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 2.5e-97 359.4 234 75.2
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 3.3e-97 359.0 265 66.0
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 4.7e-96 355.1 235 72.8
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 8.1e-96 354.4 239 69.9
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 1.8e-95 353.2 231 71.0
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.9e-92 343.2 270 65.2
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.2e-91 340.5 215 75.3
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 8.9e-87 324.3 177 86.4
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 2.2e-85 319.7 189 79.4
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 2.2e-85 319.7 189 79.4
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 4.1e-84 315.5 238 59.2
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 9.2e-84 314.3 229 69.9
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 1.2e-83 313.9 281 60.1
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 4.6e-83 312.0 175 83.4
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 8.4e-77 291.2 226 61.5
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 9.3e-76 287.7 244 57.4
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 6.0e-75 285.0 239 56.9
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 6.7e-66 255.0 155 75.5
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.9e-65 253.4 156 80.1
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 1.1e-63 247.7 228 54.4
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.0e-59 231.9 131 83.2
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 1.0e-58 231.1 212 50.9
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 4.5e-46 189.1 201 48.8
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.3e-45 187.6 258 43.0
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 4.2e-44 182.6 146 58.9
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.2e-40 170.2 226 42.5
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 1.0e-37 161.4 163 49.7
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 9.4e-36 154.8 235 39.1
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 7.7e-30 135.2 77 84.4
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 2.3e-18 97.1 59 72.9
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 2.0e-09 67.4 47 63.8
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 1.1e-07 61.6 65 47.7


User provided reference genes

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