Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 7.5e-98 360.5 183 100.0
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 7.5e-98 360.5 183 100.0
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 5.4e-48 194.9 204 57.8
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 1.3e-46 190.3 199 60.3
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 4.3e-45 185.3 123 76.4
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 4.3e-45 185.3 199 55.8
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.2e-44 183.7 202 57.9
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 2.1e-44 183.0 141 68.1
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.6e-44 182.2 141 68.1
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.8e-43 179.9 201 55.2
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 9.0e-43 177.6 141 67.4
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.0e-42 176.4 203 54.7
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 3.4e-42 175.6 189 55.0
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.3e-41 173.7 120 72.5
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.3e-41 173.7 140 65.7
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.7e-41 173.3 141 64.5
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 2.2e-41 172.9 183 55.7
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 3.8e-41 172.2 139 65.5
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 4.9e-41 171.8 194 52.1
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 4.9e-41 171.8 183 54.6
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 4.9e-41 171.8 143 63.6
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 1.1e-40 170.6 142 66.2
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.9e-40 169.9 138 65.2
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 3.2e-40 169.1 177 58.2
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 4.2e-40 168.7 140 63.6
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 5.4e-40 168.3 182 57.1
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 7.1e-40 167.9 184 54.3
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.2e-39 167.2 139 66.9
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 2.7e-39 166.0 184 53.3
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 3.5e-39 165.6 141 63.8
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 4.6e-39 165.2 202 51.0
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 6.0e-39 164.9 182 54.4
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 7.8e-39 164.5 192 52.6
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.3e-38 162.9 139 63.3
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.0e-38 162.5 140 62.1
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 8.7e-38 161.0 140 61.4
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.1e-37 160.6 135 63.0
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 1.5e-37 160.2 185 53.0
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.5e-37 160.2 196 49.5
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 4.3e-37 158.7 181 51.9
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 9.6e-37 157.5 199 49.2
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.6e-36 156.8 179 50.8
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 2.1e-36 156.4 177 52.0
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 3.6e-36 155.6 178 52.2
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 4.8e-36 155.2 151 56.3
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 4.8e-36 155.2 151 56.3
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 6.2e-36 154.8 183 53.6
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 8.1e-36 154.5 161 53.4
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 8.1e-36 154.5 138 60.9
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.1e-35 154.1 151 60.9
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.4e-35 153.7 143 55.2
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 4.0e-35 152.1 137 56.9
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 5.3e-35 151.8 185 51.4
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 6.9e-35 151.4 141 60.3
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.5e-34 150.2 186 52.7
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.0e-34 149.8 177 50.3
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 3.4e-34 149.1 205 49.8
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 4.5e-34 148.7 186 51.6
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 4.5e-34 148.7 208 49.0
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 7.6e-34 147.9 185 50.3
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.7e-33 146.7 176 49.4
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.7e-33 146.7 182 48.4
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 2.2e-33 146.4 194 47.4
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 2.9e-33 146.0 154 52.6
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.9e-33 145.2 140 57.1
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.1e-32 144.1 114 66.7
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 1.9e-32 143.3 140 57.9
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 4.2e-32 142.1 140 57.9
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.4e-32 141.7 138 57.2
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 7.1e-32 141.4 162 50.0
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 7.1e-32 141.4 142 55.6
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 2.1e-31 139.8 194 44.3
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 2.1e-31 139.8 114 65.8
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.3e-30 137.1 183 46.4
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 6.7e-30 134.8 190 45.3
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 8.7e-30 134.4 152 53.3
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 2.5e-29 132.9 140 53.6
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.3e-29 132.5 121 60.3
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 9.6e-29 131.0 126 57.1
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 9.6e-29 131.0 126 57.1
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.3e-28 130.6 126 57.1
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 1.6e-28 130.2 125 57.6
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 1.6e-28 130.2 180 46.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 2.1e-28 129.8 125 56.8
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 2.1e-28 129.8 125 56.8
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 2.1e-28 129.8 186 46.8
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 6.2e-28 128.3 78 79.5
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 1.1e-27 127.5 147 48.3
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 5.3e-27 125.2 171 46.8
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.2e-26 124.0 184 45.1
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 2.6e-26 122.9 193 43.5
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 5.8e-26 121.7 173 44.5
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 2.4e-24 116.3 79 69.6
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 7.1e-24 114.8 79 69.6
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 2.1e-23 113.2 139 46.0
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 4.6e-23 112.1 128 50.0
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.1e-21 107.5 79 64.6
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 3.7e-20 102.4 138 42.8
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 4.0e-19 99.0 123 43.1
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.5e-18 97.1 138 42.8
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.8e-11 73.6 52 67.3
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.2e-10 70.9 90 47.8
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.4e-10 69.3 90 46.7
VMungo0720G2657 Vigna mungo HOM05D007282 ORTHO05D009214 3.8e-09 65.9 103 45.6
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 6.5e-09 65.1 52 61.5
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 2.5e-08 63.2 54 63.0
Glyma.02G201900 Glycine max HOM05D007282 ORTHO05D009214 2.7e-07 59.7 106 45.3


User provided reference genes

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