Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.8e-72 274.6 129 100.0
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-64 249.6 128 91.4
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-64 249.6 128 91.4
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-64 249.6 128 91.4
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-64 249.6 128 91.4
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-64 249.6 128 91.4
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.1e-52 209.9 128 79.7
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.1e-52 209.9 128 79.7
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-51 206.5 128 78.9
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-51 206.5 128 78.9
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.3e-51 206.5 128 78.9
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.5e-44 183.0 126 69.0
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 7.5e-44 180.6 88 92.0
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.7e-40 169.5 128 68.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.7e-40 169.5 128 68.0
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 4.2e-39 164.9 130 66.2
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 7.2e-39 164.1 85 88.2
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.0e-37 160.2 128 65.6
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 1.4e-37 159.8 81 90.1
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 4.0e-37 158.3 81 88.9
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.8e-37 157.5 81 88.9
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-35 153.3 90 78.9
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 3.7e-35 151.8 84 83.3
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.1e-34 150.2 81 85.2
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 2.4e-34 149.1 81 84.0
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 3.1e-34 148.7 81 84.0
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 3.1e-34 148.7 81 82.7
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 4.1e-34 148.3 82 84.1
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 4.1e-34 148.3 82 84.1
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 5.4e-34 147.9 81 84.0
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-33 146.7 81 84.0
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.6e-33 146.4 81 82.7
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 3.5e-33 145.2 82 82.9
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 3.5e-33 145.2 81 82.7
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.5e-33 145.2 80 83.8
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.5e-33 145.2 81 82.7
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 5.9e-33 144.4 80 83.8
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 5.9e-33 144.4 81 82.7
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 1.3e-32 143.3 81 81.5
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 1.3e-32 143.3 82 82.9
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.7e-32 142.9 95 73.7
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 2.3e-32 142.5 84 79.8
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 2.3e-32 142.5 81 81.5
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 2.9e-32 142.1 82 81.7
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 3.8e-32 141.7 77 83.1
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.0e-32 141.4 81 81.5
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 6.5e-32 141.0 81 82.7
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 6.5e-32 141.0 81 82.7
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.6e-32 140.6 81 80.2
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 8.6e-32 140.6 81 80.2
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.5e-31 139.0 81 81.5
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.5e-31 139.0 81 80.2
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.2e-30 136.7 81 79.0
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.6e-30 136.3 93 71.0
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 2.1e-30 136.0 81 80.2
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.8e-30 135.6 81 79.0
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 4.7e-30 134.8 82 74.4
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.1e-30 134.4 81 76.5
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.0e-29 132.1 81 77.8
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.0e-29 131.7 81 76.5
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 6.8e-29 131.0 80 77.5
arahy.Tifrunner.gnm1.ann1.QZA5BL Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-28 129.8 100 68.0
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 2.6e-28 129.0 76 80.3
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.4e-28 128.6 76 81.6
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 7.5e-28 127.5 76 78.9
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 9.8e-28 127.1 81 74.1
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 2.8e-27 125.6 78 78.2
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 6.3e-27 124.4 82 74.4
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 1.1e-26 123.6 79 73.4
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 1.4e-26 123.2 58 91.4
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 2.7e-25 119.0 56 91.1
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.7e-25 119.0 71 80.3
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 2.7e-25 119.0 59 86.4
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 2.7e-25 119.0 59 86.4
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 4.5e-25 118.2 80 73.8
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.5e-25 118.2 73 78.1
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-24 115.9 60 86.7
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 3.3e-23 112.1 52 92.3
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 4.3e-23 111.7 81 70.4
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 5.6e-23 111.3 65 81.5
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 5.6e-23 111.3 85 65.9
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.0e-21 105.1 56 80.4
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 5.7e-20 101.3 66 74.2
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 5.7e-20 101.3 66 74.2
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.3e-19 100.1 134 53.0
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 1.3e-19 100.1 134 53.0
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-19 99.0 59 81.4
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 3.7e-19 98.6 79 63.3
Sopen07g011090 Solanum pennellii HOM05D000963 ORTHO05D004715 3.7e-19 98.6 48 95.8
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 8.3e-19 97.4 48 87.5
Medtr4g006070 Medicago truncatula HOM05D000963 ORTHO05D010073 1.6e-17 93.2 48 91.7
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 1.6e-17 93.2 48 91.7
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 7.8e-17 90.9 44 86.4
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 6.6e-16 87.8 58 72.4
arahy.Tifrunner.gnm1.ann1.BA1T4G Arachis hypogaea HOM05D000963 ORTHO05D004715 1.5e-15 86.7 47 87.2
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 4.3e-15 85.1 41 87.8
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 5.6e-15 84.7 81 54.3
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.6e-14 82.0 40 90.0
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 1.4e-13 80.1 37 89.2
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 2.3e-13 79.3 42 85.7
arahy.Tifrunner.gnm1.ann1.MEH7YS Arachis hypogaea HOM05D000963 ORTHO05D004715 3.1e-13 79.0 39 92.3
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.2e-13 78.2 37 89.2
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 6.8e-13 77.8 58 69.0
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 3.4e-12 75.5 46 71.7
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.7e-11 72.0 48 75.0
arahy.Tifrunner.gnm1.ann1.00W2W5 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.4e-11 71.2 35 94.3
arahy.Tifrunner.gnm1.ann1.KMV1WU Arachis hypogaea HOM05D000963 ORTHO05D004715 6.4e-11 71.2 35 94.3
arahy.Tifrunner.gnm1.ann1.P25ESR Arachis hypogaea HOM05D000963 ORTHO05D004715 6.4e-11 71.2 35 94.3
arahy.Tifrunner.gnm1.ann1.Q6P5E1 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.4e-11 71.2 35 94.3
arahy.Tifrunner.gnm1.ann1.R0HXDD Arachis hypogaea HOM05D000963 ORTHO05D004715 6.4e-11 71.2 35 94.3
arahy.Tifrunner.gnm1.ann1.RJ0C0L Arachis hypogaea HOM05D000963 ORTHO05D004715 6.4e-11 71.2 35 94.3
arahy.Tifrunner.gnm1.ann1.Z5J7KL Arachis hypogaea HOM05D000963 ORTHO05D004715 6.4e-11 71.2 35 94.3
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 6.4e-11 71.2 35 94.3
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 6.4e-11 71.2 35 94.3
unitig_91.g26526 Utricularia gibba HOM05D000963 ORTHO05D010073 6.4e-11 71.2 35 94.3
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.9e-10 69.7 50 76.0
FAN06G1734 Fragaria x ananassa HOM05D000963 ORTHO05D010073 3.2e-10 68.9 35 91.4
arahy.Tifrunner.gnm1.ann1.7D98FQ Arachis hypogaea HOM05D000963 ORTHO05D004715 5.4e-10 68.2 35 91.4
arahy.Tifrunner.gnm1.ann1.U095GY Arachis hypogaea HOM05D000963 ORTHO05D004715 5.4e-10 68.2 35 91.4
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 7.0e-10 67.8 51 72.5
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 9.2e-10 67.4 50 70.0
Medtr7g012800 Medicago truncatula HOM05D000963 ORTHO05D004715 9.2e-10 67.4 35 91.4
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 1.2e-09 67.0 74 51.4
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 7.3e-07 57.8 31 83.9
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.6e-06 56.6 66 43.9
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 1.6e-06 56.6 36 77.8
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 6.2e-06 54.7 26 80.8
PGSC0003DMG400023702 Solanum tuberosum HOM05D000521 ORTHO05D000384 8.1e-06 54.3 57 52.6


User provided reference genes

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