Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 1.9e-104 382.5 187 100.0
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 1.5e-74 283.1 187 79.1
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 2.6e-37 159.5 192 53.1
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 9.2e-35 151.0 92 77.2
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 2.7e-34 149.4 95 77.9
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 1.3e-33 147.1 195 48.7
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 3.0e-33 146.0 190 51.1
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 5.0e-33 145.2 182 51.6
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 8.6e-33 144.4 90 76.7
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 2.5e-32 142.9 138 57.2
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 3.3e-32 142.5 198 47.0
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 3.3e-32 142.5 192 47.4
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 4.3e-32 142.1 70 88.6
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 4.3e-32 142.1 163 49.1
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 5.6e-32 141.7 73 84.9
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 7.3e-32 141.4 66 92.4
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 1.6e-31 140.2 103 67.0
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 1.6e-31 140.2 95 73.7
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 2.1e-31 139.8 107 66.4
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 2.1e-31 139.8 93 74.2
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 2.8e-31 139.4 79 78.5
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 2.8e-31 139.4 65 92.3
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 2.8e-31 139.4 66 90.9
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 4.7e-31 138.7 92 73.9
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 6.2e-31 138.3 83 75.9
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 6.2e-31 138.3 71 85.9
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 8.0e-31 137.9 76 78.9
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 8.0e-31 137.9 87 72.4
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 8.0e-31 137.9 162 48.8
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.0e-30 137.5 66 89.4
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 1.0e-30 137.5 96 66.7
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 1.0e-30 137.5 176 47.7
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.4e-30 137.1 187 49.2
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 1.8e-30 136.7 90 73.3
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 2.3e-30 136.3 79 75.9
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 3.1e-30 136.0 72 83.3
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 3.1e-30 136.0 79 75.9
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 3.1e-30 136.0 86 73.3
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 3.1e-30 136.0 91 70.3
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 3.1e-30 136.0 92 70.7
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 3.1e-30 136.0 187 47.1
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 4.0e-30 135.6 71 84.5
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 4.0e-30 135.6 181 48.6
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 4.0e-30 135.6 88 71.6
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 4.0e-30 135.6 97 67.0
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 5.2e-30 135.2 167 49.1
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 5.2e-30 135.2 163 52.8
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 6.8e-30 134.8 91 69.2
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 8.9e-30 134.4 92 71.7
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 8.9e-30 134.4 102 64.7
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 8.9e-30 134.4 173 50.3
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 1.2e-29 134.0 92 68.5
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 1.2e-29 134.0 92 70.7
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 1.2e-29 134.0 73 80.8
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.5e-29 133.7 66 89.4
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 2.0e-29 133.3 91 67.0
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 2.0e-29 133.3 144 54.2
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.6e-29 132.9 155 52.3
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 3.4e-29 132.5 78 78.2
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 3.4e-29 132.5 90 67.8
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 3.4e-29 132.5 82 74.4
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 4.4e-29 132.1 188 46.8
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 4.4e-29 132.1 96 66.7
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 4.4e-29 132.1 92 69.6
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 5.8e-29 131.7 143 55.2
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 5.8e-29 131.7 93 72.0
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 7.5e-29 131.3 76 76.3
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 7.5e-29 131.3 76 78.9
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 7.5e-29 131.3 166 49.4
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 9.8e-29 131.0 93 67.7
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 9.8e-29 131.0 72 79.2
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 9.8e-29 131.0 72 79.2
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 9.8e-29 131.0 68 82.4
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 1.3e-28 130.6 76 78.9
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 1.3e-28 130.6 76 78.9
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 1.3e-28 130.6 76 78.9
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 1.3e-28 130.6 64 87.5
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.3e-28 130.6 71 81.7
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 1.3e-28 130.6 92 68.5
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 1.7e-28 130.2 164 48.8
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 2.2e-28 129.8 66 84.8
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 2.2e-28 129.8 72 77.8
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 2.2e-28 129.8 77 77.9
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 2.2e-28 129.8 65 83.1
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 4.9e-28 128.6 180 46.7
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 4.9e-28 128.6 165 47.9
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 4.9e-28 128.6 165 47.9
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 6.4e-28 128.3 60 91.7
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 6.4e-28 128.3 165 46.7
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 8.3e-28 127.9 165 47.9
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 1.4e-27 127.1 90 67.8
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 1.9e-27 126.7 90 68.9
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 1.9e-27 126.7 74 75.7
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 2.4e-27 126.3 164 49.4
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 7.0e-27 124.8 135 55.6
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 1.2e-26 124.0 161 45.3
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 6.0e-26 121.7 73 72.6
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 3.0e-25 119.4 66 75.8
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 3.0e-25 119.4 88 64.8
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 2.5e-24 116.3 91 60.4
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 1.6e-23 113.6 145 45.5
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 2.3e-22 109.8 134 46.3
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 8.9e-22 107.8 94 61.7
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 9.8e-21 104.4 65 66.2
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 1.2e-15 87.4 71 50.7
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 4.4e-13 79.0 69 47.8
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 1.6e-07 60.5 61 45.9


User provided reference genes

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