Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 7.2e-78 293.9 143 100.0
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 8.0e-61 237.3 142 83.1
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.3e-60 235.7 142 81.0
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 8.9e-60 233.8 143 82.5
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 1.5e-59 233.0 142 81.7
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 3.4e-59 231.9 142 82.4
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 3.4e-59 231.9 142 78.9
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 4.4e-59 231.5 142 79.6
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 4.4e-59 231.5 142 79.6
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 4.4e-59 231.5 142 78.9
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 7.5e-59 230.7 142 78.2
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 9.8e-59 230.3 143 80.4
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.7e-58 229.6 142 78.9
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 2.2e-58 229.2 142 78.9
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 2.2e-58 229.2 142 79.6
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.9e-58 228.8 142 78.9
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.7e-58 228.4 142 77.5
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 6.3e-58 227.6 142 78.2
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 6.3e-58 227.6 142 79.6
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 6.3e-58 227.6 142 76.8
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 6.3e-58 227.6 142 78.2
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 8.3e-58 227.3 142 79.6
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 1.8e-57 226.1 142 78.2
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 4.1e-57 224.9 142 76.8
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 5.4e-57 224.6 142 76.1
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 5.4e-57 224.6 142 76.8
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 5.4e-57 224.6 142 77.5
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 7.0e-57 224.2 142 76.8
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 7.0e-57 224.2 140 78.6
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 9.2e-57 223.8 142 76.8
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 9.2e-57 223.8 142 76.1
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 9.2e-57 223.8 142 76.8
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 9.2e-57 223.8 142 76.8
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 1.2e-56 223.4 142 76.8
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 2.0e-56 222.6 142 76.1
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 2.0e-56 222.6 143 77.6
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 2.0e-56 222.6 142 77.5
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 2.7e-56 222.2 142 75.4
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 3.5e-56 221.9 142 74.6
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 3.5e-56 221.9 142 76.8
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 4.6e-56 221.5 142 76.8
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 4.6e-56 221.5 142 76.8
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 4.6e-56 221.5 142 76.1
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 4.6e-56 221.5 142 76.1
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 5.9e-56 221.1 142 76.1
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 7.8e-56 220.7 142 76.8
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 1.0e-55 220.3 142 76.1
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.0e-55 220.3 142 74.6
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 1.0e-55 220.3 142 74.6
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.3e-55 219.9 143 77.6
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.3e-55 219.9 143 75.5
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 1.3e-55 219.9 142 75.4
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 1.3e-55 219.9 142 76.8
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 1.7e-55 219.5 142 74.6
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 2.3e-55 219.2 142 75.4
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 2.9e-55 218.8 142 76.8
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.9e-55 218.8 142 74.6
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 3.9e-55 218.4 142 74.6
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 3.9e-55 218.4 142 74.6
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.9e-55 218.4 142 73.9
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 3.9e-55 218.4 149 74.5
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 5.0e-55 218.0 142 73.9
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 5.0e-55 218.0 142 73.9
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 5.0e-55 218.0 143 74.8
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 5.0e-55 218.0 142 75.4
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 5.0e-55 218.0 142 73.2
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 6.6e-55 217.6 142 75.4
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 8.6e-55 217.2 142 72.5
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 1.1e-54 216.9 142 74.6
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 1.1e-54 216.9 142 74.6
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 1.5e-54 216.5 142 73.2
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 3.3e-54 215.3 142 73.9
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 4.3e-54 214.9 142 75.4
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 5.6e-54 214.5 139 76.3
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 7.3e-54 214.2 142 74.6
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 9.5e-54 213.8 142 72.5
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.2e-53 213.4 143 73.4
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.2e-53 213.4 143 73.4
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 1.2e-53 213.4 142 73.2
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 2.1e-53 212.6 142 73.9
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 2.8e-53 212.2 142 73.9
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 3.6e-53 211.8 142 73.9
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 3.6e-53 211.8 142 74.6
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 8.0e-53 210.7 142 73.2
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 1.0e-52 210.3 142 73.2
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 1.8e-52 209.5 143 73.4
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.8e-52 209.5 142 71.8
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.8e-52 209.5 142 71.8
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 2.3e-52 209.1 142 73.9
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 3.1e-52 208.8 142 72.5
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 3.1e-52 208.8 142 73.2
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 5.2e-52 208.0 142 72.5
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 8.9e-52 207.2 142 72.5
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 8.9e-52 207.2 144 72.2
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 3.4e-51 205.3 142 71.1
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 4.4e-51 204.9 142 71.8
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 5.8e-51 204.5 142 70.4
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 1.3e-50 203.4 142 71.1
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.9e-50 202.2 142 70.4
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.7e-50 201.8 142 69.7
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 6.4e-50 201.1 144 70.1
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 8.3e-50 200.7 142 69.0
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 1.9e-49 199.5 142 72.5
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 7.0e-49 197.6 142 68.3
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 9.2e-49 197.2 175 60.6
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.6e-48 196.4 141 69.5
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 9.5e-46 187.2 142 67.6
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 2.1e-45 186.0 173 56.6
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 3.6e-45 185.3 131 71.8
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 4.7e-45 184.9 142 62.7
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 3.4e-43 178.7 115 80.0
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 2.9e-42 175.6 142 61.3
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.9e-42 175.6 140 62.1
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.1e-40 169.5 164 54.9
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 6.0e-40 167.9 142 57.0
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 3.3e-38 162.2 94 79.8
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 8.1e-37 157.5 94 76.6
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 6.4e-34 147.9 93 73.1
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 1.7e-31 139.8 93 75.3
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 4.7e-29 131.7 142 54.2
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 4.7e-29 131.7 135 55.6
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 8.9e-28 127.5 91 69.2
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.0e-23 114.0 88 69.3
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.5e-19 100.1 66 72.7
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 4.2e-17 92.0 56 73.2
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.1e-14 84.0 109 45.0
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.5e-14 82.8 58 62.1
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.4e-12 76.3 49 67.3
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 1.2e-11 73.9 45 71.1
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 2.7e-08 62.8 86 38.4
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 4.6e-08 62.0 48 66.7
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 5.1e-07 58.5 37 67.6


User provided reference genes

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